Jatropha Genome Database

JcCB0012961.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012961.30 - phase: 0 /pseudo/partial
         (99 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g027800.1 Neurohypophysial hormone; Tyrosine protein ...    49   8e-07
IMGA|Medtr7g093620.1 Protein kinase chr07_pseudomolecule_IMGAG_V...    48   1e-06
IMGA|Medtr7g093610.1 Protein kinase chr07_pseudomolecule_IMGAG_V...    48   1e-06
IMGA|Medtr7g093530.1 Protein kinase chr07_pseudomolecule_IMGAG_V...    47   2e-06
IMGA|Medtr7g093550.1 Protein kinase chr07_pseudomolecule_IMGAG_V...    46   5e-06
IMGA|Medtr7g093520.1 Protein kinase chr07_pseudomolecule_IMGAG_V...    46   5e-06
IMGA|Medtr7g093470.1 Protein kinase chr07_pseudomolecule_IMGAG_V...    45   8e-06

>IMGA|Medtr6g027800.1 Neurohypophysial hormone; Tyrosine protein
           kinase chr06_pseudomolecule_IMGAG_V3 6093481-6089973 E
           EGN_Mt090430 20090702
          Length = 624

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 5/52 (9%)

Query: 27  FINEVASISRTSHVNIVTLSGFCSRVLKEHLSP---SSGLMDLLIITYNKKI 75
           FINEVASISRTSHVN+VTL GFC    K+ L     S+G +D  I  YNK++
Sbjct: 363 FINEVASISRTSHVNVVTLLGFCFEGNKKALVYEFMSNGSLDKFI--YNKEL 412


>IMGA|Medtr7g093620.1 Protein kinase chr07_pseudomolecule_IMGAG_V3
           21050221-21045808 E EGN_Mt090430 20090702
          Length = 745

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 25/31 (80%)

Query: 27  FINEVASISRTSHVNIVTLSGFCSRVLKEHL 57
           FINEVASISRTSH+NIV+L GFC  V K  L
Sbjct: 467 FINEVASISRTSHLNIVSLLGFCYEVNKRAL 497


>IMGA|Medtr7g093610.1 Protein kinase chr07_pseudomolecule_IMGAG_V3
           21044743-21042217 E EGN_Mt090430 20090702
          Length = 665

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 25/31 (80%)

Query: 27  FINEVASISRTSHVNIVTLSGFCSRVLKEHL 57
           FINEVASISRTSH+NIV+L GFC  V K  L
Sbjct: 388 FINEVASISRTSHMNIVSLLGFCYEVDKRAL 418


>IMGA|Medtr7g093530.1 Protein kinase chr07_pseudomolecule_IMGAG_V3
           21014681-21013548 E EGN_Mt090430 20090702
          Length = 377

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 25/31 (80%)

Query: 27  FINEVASISRTSHVNIVTLSGFCSRVLKEHL 57
           FINEVASISRTSH+NIV+L GFC  V K  L
Sbjct: 99  FINEVASISRTSHMNIVSLLGFCYEVDKRAL 129


>IMGA|Medtr7g093550.1 Protein kinase chr07_pseudomolecule_IMGAG_V3
          21024835-21022958 E EGN_Mt090430 20090702
          Length = 336

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 27 FINEVASISRTSHVNIVTLSGFCSRVLKEHL 57
          FINEV+SISRTSH+NIV+L GFC  V K  L
Sbjct: 58 FINEVSSISRTSHINIVSLLGFCYEVNKRAL 88


>IMGA|Medtr7g093520.1 Protein kinase chr07_pseudomolecule_IMGAG_V3
          20995742-21011291 E EGN_Mt090430 20090702
          Length = 317

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 4/46 (8%)

Query: 27 FINEVASISRTSHVNIVTLSGFC---SRVLKEHLSPSSGLMDLLII 69
          FINEVASISRTSHVNIV+L GFC    R L     P +G +D  I 
Sbjct: 52 FINEVASISRTSHVNIVSLLGFCYENKRALIYEFMP-NGSLDKFIF 96


>IMGA|Medtr7g093470.1 Protein kinase chr07_pseudomolecule_IMGAG_V3
           20982065-20978582 E EGN_Mt090430 20090702
          Length = 862

 Score = 45.1 bits (105), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/23 (91%), Positives = 22/23 (95%)

Query: 27  FINEVASISRTSHVNIVTLSGFC 49
           FINEVASISRTSHVNIV+L GFC
Sbjct: 589 FINEVASISRTSHVNIVSLLGFC 611