Jatropha Genome Database

JcCB0012281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012281.10 - phase: 0 
         (533 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g011520.1 hypothetical protein chr05_pseudomolecule_I...   380   e-106
IMGA|Medtr8g106490.1 hypothetical protein chr08_pseudomolecule_I...   350   1e-96
IMGA|Medtr4g108340.1 targeting protein-related, related chr04_ps...    63   4e-10
IMGA|Medtr2g042990.1 hypothetical protein chr02_pseudomolecule_I...    60   2e-09
IMGA|Medtr8g078540.1 hypothetical protein chr08_pseudomolecule_I...    58   1e-08

>IMGA|Medtr5g011520.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 3127714-3119751 H
           EGN_Mt090430 20090702
          Length = 773

 Score =  380 bits (977), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/495 (45%), Positives = 297/495 (60%), Gaps = 52/495 (10%)

Query: 16  VFEAREIDIDYEFDAAMFFDFT--REESAADARQAERWFETAQSYPPSPFVAKFVLREDS 73
           VF++ E D+DYEFDA  FFDFT  +++S     Q ERWFETA +YPPSPF A  V+ E+ 
Sbjct: 21  VFDSSETDLDYEFDAPRFFDFTAQQQQSLTQLPQPERWFETAGTYPPSPFAANLVMNEEV 80

Query: 74  LLED---IRTSPKSNDAENTATLISDDCSDDLVADLPAMEANKESKGTYRGIFTNLQSSN 130
            + +   +   PK    ++  + +              + A+++  G   G+  N+    
Sbjct: 81  AVANSNTVHHHPKPKVFQHFGSNV--------------VNASEKMSGLLSGVHQNV---- 122

Query: 131 LQKFSNEPLELKTGLTYYNHSSTDKARAKVKSTVKPNLPRCSTLMKPTASMLAKQNRLLH 190
                     ++ G+T+ + +  +   +K KS V   + R STLMKPTAS LAKQNR   
Sbjct: 123 ----------VQLGMTFNSRTIGEGLNSKAKSAV---VKRSSTLMKPTASQLAKQNRPPQ 169

Query: 191 VNGSRLQML--LVQKEKSLCNSM-VESQAAKRQKLEGGHSCRVGDAKQQADFIHKAPKKD 247
           + GSR Q +    +K+ S+ NS+ +ESQ+ KRQKLEGG   +VGD KQQA+F+HKAPKK 
Sbjct: 170 IVGSRFQKVQQAHKKDISVANSLEMESQSTKRQKLEGGLLRKVGDVKQQANFVHKAPKKI 229

Query: 248 GAVDKSCAHSKLRLTIPREPDLETAHRAQRIRQKNTTRFECVTVAVQRFKARPLNRKILE 307
            A D++  +SK ++T+PR P+LET HRAQR R KN    E +TVAV +FKARP    IL 
Sbjct: 230 VAADQNAGYSKPKITLPRVPELETFHRAQRTRPKNAAEAEHLTVAVPKFKARP----ILN 285

Query: 308 AXXXXXXXXXXXXXXEFQEFHLKTSERAMQHASAVSSTSFQCNDSEQGLDKPTTISVAEM 367
           A              EFQEFHLKTSERAM H SA SS++  CND ++ LDK  T S  + 
Sbjct: 286 APSLPLHKRTPARLPEFQEFHLKTSERAMHHTSATSSSTLPCNDFDKDLDKNATFSAPQN 345

Query: 368 GNRESRRPSTMDAQKQDGCSTTHIFKARPLNKKIFTSKGDIGIFRNSKRETTVPLEFNFR 427
                RRPS M A K DG    H FKARP NKKI +SKGDIG+FRN K+ETTVP+EFNF 
Sbjct: 346 SISNLRRPSVMGAPKHDGLDYRHGFKARPFNKKILSSKGDIGVFRNIKQETTVPMEFNFS 405

Query: 428 TEKRIQHDPPT-ELFSKLSLKAELQTNNGSRLQLPRPSFLSINGS-KENRLNHLQTEHKT 485
           TEKR+QH+PP  +LF+KLSL +  Q+NNGS+++ P P F   N   KEN       +   
Sbjct: 406 TEKRLQHNPPIDDLFNKLSLTSGAQSNNGSKVK-PGPHFRVFNKDLKENMGTSFHLD--- 461

Query: 486 THLMKEKPSIFGGKQ 500
              +KEKP IFG KQ
Sbjct: 462 ---LKEKPFIFGEKQ 473


>IMGA|Medtr8g106490.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 23887388-23879119 E
           EGN_Mt090430 20090702
          Length = 458

 Score =  350 bits (897), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 207/451 (45%), Positives = 270/451 (59%), Gaps = 49/451 (10%)

Query: 16  VFEAREIDIDYEFDAAMFFDFTREESAADARQAERWFETAQSYPPSPFVAKFVLREDSLL 75
           VF A EID++YEFDAA FFDFT+ ES+++A QAE WF+ A +YPPSPFV K  +RED   
Sbjct: 19  VFIAHEIDLEYEFDAARFFDFTKPESSSEALQAELWFQNAPTYPPSPFVTKLAVREDFDY 78

Query: 76  EDIRTSPKSNDAENTATLISDDCSDDLVADLPAMEANKESKGTYRGIFTNLQSSNLQKFS 135
           +D+                  +C++                        N+  ++ Q   
Sbjct: 79  DDV------------------ECTE------------------------NVDDNDKQHGP 96

Query: 136 NEPLELKTGLTYYNHSSTDKARAK-VKSTVKPNLPRCSTLMKPTASMLAKQNRLLHVNGS 194
               E++   T   H+   KA    + S  KP +P+ S+LMKPTA+  A+Q R     GS
Sbjct: 97  TVSTEMEISDTVNGHTRGSKATGNSLNSNFKPAVPKSSSLMKPTATQRARQIRPAKNVGS 156

Query: 195 RLQMLLVQKEKSL-CNSMVESQAAKRQKLEGGHSCRVGDAKQQADFIHKAPKKDGAVDKS 253
           R +  L Q E +L  +S VESQAAKRQKLE GH  +V DAKQQ +F+HK P +   V+++
Sbjct: 157 RYRKPLTQNEMNLSTSSGVESQAAKRQKLEDGHLRKVTDAKQQTNFVHKKPMRAVNVEQN 216

Query: 254 CAHSKLRLTIPREPDLETAHRAQRIRQKNTTRFECVTVAVQRFKARPLNRKILEAXXXXX 313
            A SKL+LTIPREPDL+TAHRAQRIR K     E +TVA  RFKARPLNR+IL+A     
Sbjct: 217 YACSKLKLTIPREPDLKTAHRAQRIRPKIVGEAEHMTVAAPRFKARPLNRRILDAPSLPL 276

Query: 314 XXXXXXXXXEFQEFHLKTSERAMQHASAVSSTSFQCNDSEQGLDKPTTISVAEMGNRESR 373
                    EF+EFHLKT ERA+QH SA S+ S  CNDS++G D+ T++   E   +++R
Sbjct: 277 PKRSTPRLPEFREFHLKTLERAIQHTSATSA-SHHCNDSDKGWDQHTSV---EHKIKDAR 332

Query: 374 RPSTMDAQKQDGCSTTHIFKARPLNKKIFTSKGDIGIFRNSKRETTVPLEFNFRTEKRIQ 433
           RP+ M A K DG    HIFKA+PLNKKI ++K   G+   +K ET   +EFN   EK IQ
Sbjct: 333 RPTAMGAPKHDGLGFNHIFKAQPLNKKILSNKEHAGVLHTNK-ETADQMEFNSHAEKGIQ 391

Query: 434 HDPPTELFSKLSLKAELQTNNGSRLQLPRPS 464
           H+ P ELFSKLSL +E Q NNGS  +LP+ S
Sbjct: 392 HNLPIELFSKLSLTSEGQPNNGSHFKLPQQS 422


>IMGA|Medtr4g108340.1 targeting protein-related, related
           chr04_pseudomolecule_IMGAG_V3 23985072-23983201 E
           EGN_Mt090430 20090702
          Length = 261

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 100/241 (41%), Gaps = 47/241 (19%)

Query: 22  IDIDYEFDAAMFFDFTREESAADARQAERWFETAQSYPPSPFVAKFVLR----------- 70
           ID  YEF A  FFDF + ES  D R+AE WF TA SY PSPF+ K               
Sbjct: 15  IDEIYEFCAPRFFDFLKGESDDDVRRAELWFHTALSYAPSPFMPKIKAGRSITVDTLCDF 74

Query: 71  ---------EDSLLE------DIRTSPKSND--AENTATLISDDCSDDLVADLPAMEANK 113
                    EDS+LE       I +  K +D   E   T++    S     D P  EA +
Sbjct: 75  SEADNMPKVEDSVLESNTRPQSITSKVKEDDRAKEEKVTIVPHMNSTTKKEDAPCCEAEE 134

Query: 114 ESKGTYRGIFTNLQSSNLQKFSNEPLELKTGLTYYNHSSTDKARAKV---KSTVKPNLPR 170
            S        T+L+    +K S        G      +ST  A  +V     T KP L R
Sbjct: 135 NSS-------TSLEDGVGKKMSK-------GEILNTATSTRGASVEVGKDACTPKPAL-R 179

Query: 171 CSTLMKPTASMLAKQNRLLHVNG-SRLQMLLVQKEKSLCNSMVESQAAKRQKLEGGHSCR 229
            S     T S   + ++ +  N  +RLQ    +      +   E+QA KRQKLEGG + +
Sbjct: 180 KSVNATSTNSKKQQNSKKVSTNTKTRLQSGASKSAAGTLHFTQENQAIKRQKLEGGKTRQ 239

Query: 230 V 230
           V
Sbjct: 240 V 240


>IMGA|Medtr2g042990.1 hypothetical protein
          chr02_pseudomolecule_IMGAG_V3 12202899-12202585 E
          EGN_Mt090430 20090702
          Length = 104

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 2/47 (4%)

Query: 16 VFEAREIDIDYEFDAAMFFDFT--REESAADARQAERWFETAQSYPP 60
          VF++ EID+DYEFDA  FFDFT  +++S     Q ERWFETA +YPP
Sbjct: 42 VFDSSEIDLDYEFDAPRFFDFTAQQQQSLTQLPQPERWFETAGTYPP 88


>IMGA|Medtr8g078540.1 hypothetical protein
          chr08_pseudomolecule_IMGAG_V3 15999198-15999464 H
          EGN_Mt090430 20090702
          Length = 88

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 16 VFEAREIDIDYEFDAAMFFDFT--REESAADARQAERWFETAQSYPPS 61
          VF++ E D+DYEFD   FFDFT  +++S     Q ERWFETA +YPPS
Sbjct: 21 VFDSSETDLDYEFDEPRFFDFTAQQQQSLTQLPQPERWFETAGTYPPS 68