Jatropha Genome Database

JcCB0011781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0011781.10 - phase: 0 
         (261 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g071750.1 Protein of unknown function DUF1692 chr05_p...   508   e-144
IMGA|Medtr5g071750.2 Protein of unknown function DUF1692 chr05_p...   349   8e-97
IMGA|Medtr4g110800.1 Thioredoxin fold chr04_pseudomolecule_IMGAG...    92   2e-19
IMGA|Medtr2g097210.1 Thioredoxin-like fold chr02_pseudomolecule_...    86   1e-17

>IMGA|Medtr5g071750.1 Protein of unknown function DUF1692
           chr05_pseudomolecule_IMGAG_V3 25475004-25465316 E
           EGN_Mt090430 20090702
          Length = 386

 Score =  508 bits (1307), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 233/260 (89%), Positives = 254/260 (97%)

Query: 2   SIDKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNNCEEVREAYRKKGWALSNPDLIDQC 61
           +I+KPLQRHGGRLEHNETYCGSCYGAEASDE+CCN+CEEVREAYRKKGWALS+PD IDQC
Sbjct: 127 NIEKPLQRHGGRLEHNETYCGSCYGAEASDEECCNSCEEVREAYRKKGWALSSPDSIDQC 186

Query: 62  KREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQKDSFNI 121
           KREGFL+RIK+EEGEGCN+YGFLEVNKVAGNFHFAPGKSFQQS VHVHDLLAFQK+SFN+
Sbjct: 187 KREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKESFNL 246

Query: 122 SHKINRLTFGEYFPGVVNPLDGVHWTQETPSGMYQYFLKVVPTVYTDVSGHTIQSNQFSV 181
           SH INR+ FG+YFPGVVNPLD VHWTQETPSGMYQYF+KVVPT+YTDVSG+TIQSNQFSV
Sbjct: 247 SHHINRIAFGDYFPGVVNPLDRVHWTQETPSGMYQYFIKVVPTMYTDVSGNTIQSNQFSV 306

Query: 182 TEHFRSAEAGRLQALPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVFTVSGILD 241
           TEHFR+A+ GRLQ+LPGVFFFYDLSPIKVTFTE+HVSFLHFLTNVCAIVGG+FTVSGILD
Sbjct: 307 TEHFRTADVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSGILD 366

Query: 242 SFIYHGQKAIKKKMEIGKFS 261
           SFIYHGQKAIKKKME+GKFS
Sbjct: 367 SFIYHGQKAIKKKMELGKFS 386


>IMGA|Medtr5g071750.2 Protein of unknown function DUF1692
           chr05_pseudomolecule_IMGAG_V3 25475004-25465316 E
           EGN_Mt090430 20090702
          Length = 312

 Score =  349 bits (895), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 157/177 (88%), Positives = 172/177 (97%)

Query: 2   SIDKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNNCEEVREAYRKKGWALSNPDLIDQC 61
           +I+KPLQRHGGRLEHNETYCGSCYGAEASDE+CCN+CEEVREAYRKKGWALS+PD IDQC
Sbjct: 127 NIEKPLQRHGGRLEHNETYCGSCYGAEASDEECCNSCEEVREAYRKKGWALSSPDSIDQC 186

Query: 62  KREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQKDSFNI 121
           KREGFL+RIK+EEGEGCN+YGFLEVNKVAGNFHFAPGKSFQQS VHVHDLLAFQK+SFN+
Sbjct: 187 KREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKESFNL 246

Query: 122 SHKINRLTFGEYFPGVVNPLDGVHWTQETPSGMYQYFLKVVPTVYTDVSGHTIQSNQ 178
           SH INR+ FG+YFPGVVNPLD VHWTQETPSGMYQYF+KVVPT+YTDVSG+TIQSNQ
Sbjct: 247 SHHINRIAFGDYFPGVVNPLDRVHWTQETPSGMYQYFIKVVPTMYTDVSGNTIQSNQ 303


>IMGA|Medtr4g110800.1 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
           25223896-25232907 E EGN_Mt090430 20090702
          Length = 477

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 41/205 (20%)

Query: 77  GCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQKDSFNISHKINRLTFGEYFPG 136
           GC + G++ V KV G+   +      +S+ H     +F     N+SH IN L+FG+    
Sbjct: 290 GCRVEGYVRVKKVPGSLVVS-----ARSDAH-----SFDASQMNMSHVINHLSFGKK--- 336

Query: 137 VVNP---LDGVHW------------------TQETPSGM-YQYFLKVVPTVYTDVSGHTI 174
            V P   +D  HW                  T++    +  +++++VV T      G+ +
Sbjct: 337 -VTPRAMIDVKHWIPYLGINHDRLNGRSFINTRDLEGNVTIEHYIQVVKTEVITRKGYKL 395

Query: 175 QSNQFSVTEHFRSAEAGRLQALPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVF 234
              ++  T H   A +  +   P   F  +LSP++V  TE   SF HF+TNVCAI+GGVF
Sbjct: 396 I-EEYEYTAHSSVAHSVNI---PVARFHLELSPMQVLITENQKSFSHFITNVCAIIGGVF 451

Query: 235 TVSGILDSFIYHGQKAIKKKMEIGK 259
           TV+GILDS +++  KA+ KK+EIGK
Sbjct: 452 TVAGILDSILHNTIKAM-KKIEIGK 475


>IMGA|Medtr2g097210.1 Thioredoxin-like fold
           chr02_pseudomolecule_IMGAG_V3 22752875-22746360 H
           EGN_Mt090430 20090702
          Length = 482

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 35/203 (17%)

Query: 77  GCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQKDSFNISHKINRLTFGE---- 132
           GC I G++ V KV GN   +      +S+ H     +F     N+SH ++ L+FG+    
Sbjct: 293 GCRIEGYVRVKKVPGNLIISA-----RSDAH-----SFDASQMNMSHAVHHLSFGKKLSP 342

Query: 133 --------YFPGVVNP---LDGVHWTQETPSG---MYQYFLKVVPTVYTDVSGHTIQSNQ 178
                     P V N    LDG+ +      G     +++L++V T      G+ +   +
Sbjct: 343 KLMSDVQRLIPYVGNSHDRLDGLSFINSHDFGANVTLEHYLQIVKTEVITRQGYQL-VEE 401

Query: 179 FSVTEHFRSAEAGRLQALPGVFFFYDLSPIKV--TFTEQHVSFLHFLTNVCAIVGGVFTV 236
           +  T H  S+ A  L  +P   F   LSP++V    TE H SF HF+TNVCAIVGGVFTV
Sbjct: 402 YEYTAH--SSLAHSLH-VPVARFHLQLSPMQVCVLITEDHKSFSHFITNVCAIVGGVFTV 458

Query: 237 SGILDSFIYHGQKAIKKKMEIGK 259
           +GI +S I H    + +K+E+GK
Sbjct: 459 AGITES-ILHNTIRLMRKVELGK 480