Jatropha Genome Database
- JcCB0011561.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0011561.30 + phase: 0
(193 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g043670.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 361 e-100
IMGA|Medtr4g100810.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 200 3e-52
IMGA|Medtr3g163290.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 195 1e-50
IMGA|Medtr8g096930.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 188 2e-48
IMGA|Medtr4g129080.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 180 3e-46
IMGA|Medtr7g134340.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 180 3e-46
IMGA|Medtr4g128930.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 180 4e-46
IMGA|Medtr3g093650.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 177 4e-45
IMGA|Medtr3g136570.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 142 8e-35
IMGA|Medtr1g013450.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 126 6e-30
IMGA|AC233070_2.1 Peptidyl-prolyl cis-trans isomerase, cyclophil... 111 2e-25
IMGA|Medtr5g015600.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 105 2e-23
IMGA|Medtr3g103370.1 Peptidyl-prolyl cis-trans isomerase, cyclop... 75 2e-14
IMGA|Medtr6g028110.1 RNA-binding region RNP-1 (RNA recognition m... 50 7e-07
>IMGA|Medtr8g043670.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr08_pseudomolecule_IMGAG_V3
9500342-9494770 F EGN_Mt090430 20090702
Length = 185
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/180 (95%), Positives = 176/180 (97%)
Query: 14 VEWHVRPPNPKNPIVFFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHRKAGAPI 73
VEWHVRPPNPKNPIVFFD+TIG IPAGRIKMELFADIAPKTAENFRQFCTGE+RKAG PI
Sbjct: 6 VEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPI 65
Query: 74 GYKGCQFHRLIKDFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPN 133
GYKGCQFHR+IKDFMIQAGD++K DGSGCASIYG KFDDENFTAKHTGPGLLSMANSGPN
Sbjct: 66 GYKGCQFHRVIKDFMIQAGDYVKGDGSGCASIYGLKFDDENFTAKHTGPGLLSMANSGPN 125
Query: 134 TNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
TNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM
Sbjct: 126 TNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 185
>IMGA|Medtr4g100810.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr04_pseudomolecule_IMGAG_V3
21661849-21662767 F EGN_Mt090430 20090702
Length = 172
Score = 200 bits (509), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 124/171 (72%), Gaps = 4/171 (2%)
Query: 25 NPIVFFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHR--KAGAPIGYKGCQFHR 82
NP VFFD+++G PAGRI ELFAD+ P+TAENFR CTGE ++G P+ +KG FHR
Sbjct: 3 NPKVFFDMSVGGNPAGRIIFELFADVTPRTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 62
Query: 83 LIKDFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFIT 142
+I FM Q GDF +G+G SIYG KF DENF KHTGPG+LSMAN+GP TNG QFFI
Sbjct: 63 VIPQFMCQGGDFTNGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
Query: 143 CAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
AK +WLD KHVVFG+V+ +GL +V++IE V +G K VIA+CG++
Sbjct: 123 TAKTEWLDGKHVVFGQVV-EGLDIVKEIEKVGSGSGKTSK-PVVIADCGQV 171
>IMGA|Medtr3g163290.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr03_pseudomolecule_IMGAG_V3
42902009-42902791 F EGN_Mt090430 20090702
Length = 191
Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 118/168 (70%), Gaps = 4/168 (2%)
Query: 28 VFFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHR--KAGAPIGYKGCQFHRLIK 85
VFFD+T+G P GRI MEL+AD P TA+NFR CTGE +G P+ YKG FHR+I
Sbjct: 14 VFFDMTVGDEPVGRIVMELYADTTPLTADNFRALCTGEKGLGSSGKPLHYKGSTFHRVIP 73
Query: 86 DFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAK 145
DFM Q GDF +G+G SIYG KF DENF HTGPG+LSMAN+GP TNG QFFI AK
Sbjct: 74 DFMCQGGDFTAGNGTGGESIYGSKFADENFIKTHTGPGVLSMANAGPGTNGSQFFICTAK 133
Query: 146 CDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
+WLD KHVVFG V+ +G+ VV++IE V +G K VIA+CG++
Sbjct: 134 TEWLDGKHVVFGEVV-EGMEVVKEIEKVGSGSGKTSK-PVVIADCGQL 179
>IMGA|Medtr8g096930.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type; chr08_pseudomolecule_IMGAG_V3
21419679-21424111 E EGN_Mt090430 20090702
Length = 360
Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Query: 25 NPIVFFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHR---KAGAPIGYKGCQFH 81
NP V+FDI+IG GRI +ELFAD+ PKTAENFR CTGE P+ +K FH
Sbjct: 3 NPRVYFDISIGGELEGRIVIELFADVVPKTAENFRSLCTGEKGIGPHTNVPLHFKNSIFH 62
Query: 82 RLIKDFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFI 141
R++K FMIQ GD +DG+G SIYG F+DENF KH G+LSMANSGPNTNG QFFI
Sbjct: 63 RVVKGFMIQGGDISASDGTGGESIYGPNFEDENFDLKHERKGILSMANSGPNTNGSQFFI 122
Query: 142 TCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
T + LD KHVVFG+V+ G+ VVR +E G N+RP+ VIA+CGE+
Sbjct: 123 TTTRTPHLDGKHVVFGKVV-KGIGVVRSVELGPVGENDRPEQDVVIADCGEI 173
>IMGA|Medtr4g129080.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type; chr04_pseudomolecule_IMGAG_V3
30628006-30631131 E EGN_Mt090430 20090702
Length = 361
Score = 180 bits (457), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 113/168 (67%), Gaps = 4/168 (2%)
Query: 29 FFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHRK---AGAPIGYKGCQFHRLIK 85
F DI+IG GRI +EL+ D+ PKTAENFR CTGE G P+ +KG FHR++K
Sbjct: 7 FLDISIGEELEGRILVELYNDVVPKTAENFRALCTGEKGSGPNTGVPLHFKGSCFHRIVK 66
Query: 86 DFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAK 145
MI+ GD DG+G SIYG KF+DENF KH G+LSMAN+GPNTNG QFFI+ +
Sbjct: 67 GAMIEGGDISTGDGTGGESIYGLKFEDENFEMKHERKGMLSMANTGPNTNGSQFFISTTR 126
Query: 146 CDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
LD KHVVFG+V+ G+ VVR IE+V TG +RP L I +CGE+
Sbjct: 127 TAHLDGKHVVFGKVV-KGMGVVRSIEHVTTGDEDRPVLDVKIVDCGEI 173
>IMGA|Medtr7g134340.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr07_pseudomolecule_IMGAG_V3
31708007-31710614 E EGN_Mt090430 20090702
Length = 251
Score = 180 bits (457), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 109/165 (66%), Gaps = 11/165 (6%)
Query: 29 FFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHRKAGAPIGYKGCQFHRLIKDFM 88
FFD+ G GRI + LF ++APKT ENFR GYKGC FHR+IK+FM
Sbjct: 94 FFDVEAGGESLGRIVLGLFGEVAPKTVENFRD----------KGYGYKGCSFHRIIKEFM 143
Query: 89 IQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDW 148
IQ GDF + +G+G SIYG F+DE+F KH GPG+LSMAN+GPNTNG QFFI K W
Sbjct: 144 IQGGDFTEGNGTGGVSIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPW 203
Query: 149 LDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
LDN+HVVFG V+ DG+ VVR +E+ T + PK C I CGE+
Sbjct: 204 LDNRHVVFGHVI-DGMDVVRTLESQETSRLDIPKKPCRIVNCGEL 247
>IMGA|Medtr4g128930.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type; Tetratricopeptide-like helical
chr04_pseudomolecule_IMGAG_V3 30510778-30508029 E
EGN_Mt090430 20090702
Length = 352
Score = 180 bits (456), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 113/168 (67%), Gaps = 4/168 (2%)
Query: 29 FFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHRK---AGAPIGYKGCQFHRLIK 85
F DI+IG GRI +EL+ D+ PKTAENFR CTGE G P+ +KG FHR++K
Sbjct: 7 FLDISIGEELEGRILVELYNDVVPKTAENFRALCTGEKGSGPNTGVPLHFKGSCFHRIVK 66
Query: 86 DFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAK 145
MI+ GD DG+G SIYG KF+DENF KH G+LSMAN+GPNTNG QFFI+ +
Sbjct: 67 GAMIEGGDISTGDGTGGESIYGLKFEDENFEMKHERKGMLSMANTGPNTNGSQFFISTTR 126
Query: 146 CDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
LD KHVVFG+V+ G+ VVR IE+V TG +RP L I +CGE+
Sbjct: 127 TAHLDGKHVVFGKVV-KGMGVVRSIEHVTTGDEDRPVLDVKIVDCGEI 173
>IMGA|Medtr3g093650.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr03_pseudomolecule_IMGAG_V3
22296988-22295101 E EGN_Mt090430 20090702
Length = 162
Score = 177 bits (448), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 104/159 (65%), Gaps = 4/159 (2%)
Query: 37 IPAGRIKMELFADIAPKTAENFRQFCTGEHR--KAGAPIGYKGCQFHRLIKDFMIQAGDF 94
+ GRI M LF PKTAENFR CTGE K+G P+ YKG FHR+I FM+Q GDF
Sbjct: 4 LAPGRIVMGLFGTTVPKTAENFRALCTGEKGVGKSGNPLHYKGSAFHRIIPSFMVQGGDF 63
Query: 95 LKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHV 154
DG G SIYG KF DENF KHTGPG LSMANSG +TNG QFFIT K WLD +HV
Sbjct: 64 TSGDGRGGESIYGDKFADENFKLKHTGPGYLSMANSGQDTNGSQFFITTVKTSWLDGRHV 123
Query: 155 VFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 193
VFG+VL G+ V+ KIE + + PK VI + GE+
Sbjct: 124 VFGKVL-SGMDVLHKIEAEGS-ESGSPKRTVVILDSGEL 160
>IMGA|Medtr3g136570.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr03_pseudomolecule_IMGAG_V3
34507377-34514948 E EGN_Mt090430 20090702
Length = 906
Score = 142 bits (359), Expect = 8e-35, Method: Composition-based stats.
Identities = 80/183 (43%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 24 KNPIVFFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEH---RKAGAPIGYKGCQF 80
KNP+VF D++I P R+ ELF D+APKTAENFR CTGE G + YKG F
Sbjct: 8 KNPLVFMDVSIDGDPVKRMVFELFHDVAPKTAENFRALCTGERGISSNTGKLLHYKGSFF 67
Query: 81 HRLIKDFMIQAGDFLK-----------NDGSGCASIYGHKFDDENFTAKHTGPGLLSMAN 129
H+++K +++ GDF+ +DG+G SIYG F DE+ KH GPGLLSMA
Sbjct: 68 HQIMKGSIVKGGDFVNRNALFHLHVSCDDGTGGESIYGSNFPDESPRLKHDGPGLLSMAI 127
Query: 130 SGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAE 189
+ + G F IT LD K+VVFGR++ +GL V++KIE+V P + I
Sbjct: 128 ADRDKLGSHFIITLKADHHLDRKYVVFGRLV-EGLKVLKKIEDVGDD-EGHPTVTVKIIN 185
Query: 190 CGE 192
CGE
Sbjct: 186 CGE 188
>IMGA|Medtr1g013450.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr01_pseudomolecule_IMGAG_V3
2473357-2480125 E EGN_Mt090430 20090702
Length = 832
Score = 126 bits (317), Expect = 6e-30, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 99/174 (56%), Gaps = 8/174 (4%)
Query: 24 KNPIVFFDITIGTIPAGRIKMELFADIAPKTAENFRQFCTGEHRKAGAPIGYKGCQFHR- 82
KN +VF D+++ P ++ ELF D+APKTAENFR CTG G + YKG FH+
Sbjct: 63 KNSMVFMDVSVDGDPYEKMVFELFYDVAPKTAENFRALCTGVSPNTGKSLHYKGSFFHQI 122
Query: 83 ----LIKDFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNGCQ 138
++KD + GDF+ +G+G SIY KF DE+ KH PGLLSMA + +T G
Sbjct: 123 LKGSIVKDTGLMGGDFINRNGTGGESIYP-KFPDESPRLKHDSPGLLSMAIADRDTLGSH 181
Query: 139 FFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGE 192
F IT LD KHVVFG+++ G +++KIE+V P + I GE
Sbjct: 182 FIITLKADHHLDRKHVVFGKLV-QGYDILKKIEDVGN-EEGLPTVTVKIINSGE 233
>IMGA|AC233070_2.1 Peptidyl-prolyl cis-trans isomerase, cyclophilin
type AC233070.4 3910-1563 F EGN_Mt090430 20090702
Length = 160
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 83/143 (58%), Gaps = 11/143 (7%)
Query: 40 GRIKMELFADIAPKTAENFRQFCTGEHRKAGAPIGYKGCQFHRLIKDFMIQAGDFLKNDG 99
G IK E+F D PKT+ENF C + + G FHR IK FMIQ GD G
Sbjct: 10 GDIKCEIFCDEVPKTSENFLALCASGY--------FDGTIFHRNIKGFMIQGGD-PTGTG 60
Query: 100 SGCASIYGHKFDDE-NFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGR 158
G SI+G KF+DE + KH G+LSMANSGPNTNG QFFI+ AK L+ + VFGR
Sbjct: 61 KGGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKHPHLNGLYTVFGR 120
Query: 159 VLGDGLLVVRKIENVATGPNNRP 181
V+ G V+ +E TG +RP
Sbjct: 121 VI-HGFEVLDLMEKTPTGAGDRP 142
>IMGA|Medtr5g015600.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type; U box chr05_pseudomolecule_IMGAG_V3
5239975-5233599 E EGN_Mt090430 20090702
Length = 592
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 40 GRIKMELFADIAPKTAENFRQFCTGEHRKAGAPIGYKGCQFHRLIKDFMIQAGDFLKNDG 99
G + +EL DIAP+ ENF C + Y G FHR I++FMIQ GD G
Sbjct: 354 GDLNIELHCDIAPRACENFITLCERGY--------YNGVAFHRSIRNFMIQGGD-PTGTG 404
Query: 100 SGCASIYGHKFDDE-NFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGR 158
G SI+G F DE N H+G G++SMANSGP+TNG QFFI + L+ KH VFG
Sbjct: 405 RGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGG 464
Query: 159 VLGDGLLVVRKIENVATGPNNRP 181
V+G GL + +E V ++RP
Sbjct: 465 VVG-GLTTLATMEKVPVDDSDRP 486
>IMGA|Medtr3g103370.1 Peptidyl-prolyl cis-trans isomerase,
cyclophilin type chr03_pseudomolecule_IMGAG_V3
25431124-25430029 E EGN_Mt090430 20090702
Length = 111
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 55/95 (57%), Gaps = 20/95 (21%)
Query: 77 GCQFHRLIKDFMIQAGDFLKNDGSGCASIYGHKFDDENFTAKHTGPGLLSMANSGPNTNG 136
GC H +IKDFMIQ GDF D+ TGPG +SM N+GPNTNG
Sbjct: 27 GCGLH-VIKDFMIQ-GDF-----------------DKGNRLSRTGPGAVSMTNAGPNTNG 67
Query: 137 CQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIE 171
QFFI K WLD +HVVFG+VL +G +VR IE
Sbjct: 68 SQFFICTIKTPWLDQRHVVFGQVL-EGKDIVRLIE 101
>IMGA|Medtr6g028110.1 RNA-binding region RNP-1 (RNA recognition
motif); Zinc finger, CCHC-type; Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
chr06_pseudomolecule_IMGAG_V3 6287888-6293224 E
EGN_Mt090430 20090702
Length = 580
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 105 IYGHK---FDDE-NFTAKHTGPGLLSMANSGPNTNGCQFFITCA-KCDWLDNKHVVFGRV 159
+YG + F+DE + KH+ G ++MA++G N N QF+IT D+LD KH VFG V
Sbjct: 46 LYGDQARFFNDEIHIDLKHSKTGTVAMASAGENLNASQFYITLRDDLDYLDGKHTVFGEV 105
Query: 160 LGDGLLVVRKIENVATGPNNRP 181
+G + +I RP
Sbjct: 106 -AEGFETLTRINEAYADGKGRP 126