Jatropha Genome Database
- JcCB0011561.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0011561.20 + phase: 0
(188 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g005810.1 Thioredoxin-like fold; chr03_pseudomolecule... 167 2e-42
IMGA|Medtr1g143570.1 Thioredoxin; Thioredoxin fold; chr01_pseudo... 64 4e-11
IMGA|Medtr5g021080.1 Thioredoxin fold; chr05_pseudomolecule_IMGA... 59 1e-09
IMGA|Medtr1g125070.1 Thioredoxin-related; Thioredoxin domain 2; ... 58 3e-09
IMGA|Medtr7g008470.1 Thioredoxin domain 2; Thioredoxin fold; chr... 55 2e-08
IMGA|Medtr4g129950.1 Thioredoxin domain 2; chr04_pseudomolecule_... 53 8e-08
IMGA|Medtr5g038960.1 Thioredoxin domain 2; Thioredoxin fold; chr... 52 2e-07
IMGA|Medtr8g005420.1 Thioredoxin fold; chr08_pseudomolecule_IMGA... 51 4e-07
IMGA|Medtr8g005260.1 Thioredoxin fold; chr08_pseudomolecule_IMGA... 51 4e-07
IMGA|Medtr4g154660.1 Thioredoxin domain 2; chr04_pseudomolecule_... 50 5e-07
IMGA|Medtr2g096730.1 Thioredoxin-like fold; chr02_pseudomolecule... 50 9e-07
IMGA|Medtr5g038910.1 Thioredoxin fold; chr05_pseudomolecule_IMGA... 49 1e-06
IMGA|Medtr1g028610.1 Thioredoxin-related; Thioredoxin domain 2; ... 49 2e-06
IMGA|Medtr2g110450.1 Disulphide isomerase; Thioredoxin-related; ... 48 3e-06
IMGA|Medtr4g111230.1 Thioredoxin fold; chr04_pseudomolecule_IMGA... 48 3e-06
IMGA|Medtr4g081690.1 Disulphide isomerase; Thioredoxin-related; ... 47 4e-06
IMGA|Medtr8g116230.1 Thioredoxin domain 2; chr08_pseudomolecule_... 46 8e-06
>IMGA|Medtr3g005810.1 Thioredoxin-like fold;
chr03_pseudomolecule_IMGAG_V3 487338-483911 E
EGN_Mt090430 20090702
Length = 160
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Query: 52 TRKRPFSLSTQP----RRLLCRPPLGKYVREDYLVKKKSAQEIQELVRGERNVPIIIDFY 107
T + P+ L+ R+LLC+PP GK+V+EDYLVKK SA+EIQELV+G+RNVP+IIDFY
Sbjct: 41 THQHPYPLTISTDFNNRKLLCKPPKGKHVKEDYLVKKLSAEEIQELVKGDRNVPLIIDFY 100
Query: 108 ATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFIS 161
ATWCGPCILMAQELEMLAVEYE+NA+IVKVDTD+EYEFA DMQV L I+
Sbjct: 101 ATWCGPCILMAQELEMLAVEYENNAMIVKVDTDDEYEFARDMQVISLFCFLCIT 154
>IMGA|Medtr1g143570.1 Thioredoxin; Thioredoxin fold;
chr01_pseudomolecule_IMGAG_V3 31742605-31740456 F
EGN_Mt090430 20090702
Length = 181
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 93 LVRGERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVR 152
+++ ER P++++F ATWCGPC L+ +E +A EY +VK+D D + + +V
Sbjct: 82 VLKSER--PVLVEFVATWCGPCRLITPAMESIAQEYADRLTVVKIDHDANPQLIEEYKVY 139
Query: 153 GLPTLFFISPDPKKDAIRTEGLIPIQMMRDIID 185
GLPTL + R EG I ++ +D
Sbjct: 140 GLPTLILFKNGEEFPGSRKEGAITKVKLKQHLD 172
>IMGA|Medtr5g021080.1 Thioredoxin fold;
chr05_pseudomolecule_IMGAG_V3 7995747-7998123 E
EGN_Mt090430 20090702
Length = 120
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 93 LVRG-ERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQV 151
L RG E I++DF A+WCGPC +A L LA +Y +NAI +KVD DE A D +
Sbjct: 23 LHRGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKY-TNAIFLKVDVDELKSVAQDWAI 81
Query: 152 RGLPTLFFI 160
+PT F+
Sbjct: 82 EAMPTFVFV 90
>IMGA|Medtr1g125070.1 Thioredoxin-related; Thioredoxin domain 2;
chr01_pseudomolecule_IMGAG_V3 27476780-27480007 E
EGN_Mt090430 20090702
Length = 185
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 83 KKKSAQEIQELVRGERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEE 142
KK++ +L+ + P+ +DFYATWCGPC M LE ++ + IVK+DT++
Sbjct: 63 KKQTFSSFDDLL-ANSDKPVFVDFYATWCGPCQFMVPVLEEVSARLQDQIQIVKIDTEKY 121
Query: 143 YEFAHDMQVRGLPTLFFISPDPK 165
A+ + LPT F I D K
Sbjct: 122 PSIANKYNIEALPT-FIIFKDGK 143
>IMGA|Medtr7g008470.1 Thioredoxin domain 2; Thioredoxin fold;
chr07_pseudomolecule_IMGAG_V3 1263803-1262352 F
EGN_Mt090430 20090702
Length = 134
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 102 IIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFIS 161
++IDF ATWCGPC +M L+ +A E+ ++ +K+D DE + A + +V+ +PT +
Sbjct: 51 VVIDFSATWCGPCKMMEPILQAMANEF-TDVEFIKIDVDELSDVAQEFKVQAMPTFLLLK 109
Query: 162 PDPKKDAI 169
+ D +
Sbjct: 110 NGKEVDKV 117
>IMGA|Medtr4g129950.1 Thioredoxin domain 2;
chr04_pseudomolecule_IMGAG_V3 31053060-31056258 F
EGN_Mt090430 20090702
Length = 170
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 101 PIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFI 160
P++++FYA WCGPC ++ + ++ +A EY ++TD + + A + ++ +P +
Sbjct: 83 PVLVEFYANWCGPCKMVHRVIDEIATEYAGRLKCFVLNTDADMQIAEEYGIKAVPVVVLF 142
Query: 161 SPDPKKDAI 169
K DA+
Sbjct: 143 KNGKKCDAV 151
>IMGA|Medtr5g038960.1 Thioredoxin domain 2; Thioredoxin fold;
chr05_pseudomolecule_IMGAG_V3 16460397-16459164 F
EGN_Mt090430 20090702
Length = 127
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 99 NVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLF 158
N ++IDF ATWCGPC M ++ LA +Y+ + +K+D DE + A QV+ +PT
Sbjct: 41 NKLMVIDFTATWCGPCKYMDPIIKELAAKYK-DVEFIKIDVDELMDVASAFQVQAMPTFI 99
Query: 159 FI 160
+
Sbjct: 100 LL 101
>IMGA|Medtr8g005420.1 Thioredoxin fold;
chr08_pseudomolecule_IMGAG_V3 268305-270432 E
EGN_Mt090430 20090702
Length = 172
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 81 LVKKKSAQEIQELVRGERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTD 140
+ K+S + E RG+R + +I +F A WC PC ++A L+ +Y S +V +D D
Sbjct: 64 ITTKESWNQTLEQARGDRKI-VIANFSARWCSPCKIIAPYYCELSEKYPSIMFLV-IDVD 121
Query: 141 EEYEFAHDMQVRGLPTLFFI 160
E +F+ ++ PT FF+
Sbjct: 122 ELTDFSTSWDIKATPTFFFL 141
>IMGA|Medtr8g005260.1 Thioredoxin fold;
chr08_pseudomolecule_IMGAG_V3 146450-144322 E
EGN_Mt090430 20090702
Length = 172
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 81 LVKKKSAQEIQELVRGERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTD 140
+ K+S + E RG+R + +I +F A WC PC ++A L+ +Y S +V +D D
Sbjct: 64 ITTKESWNQTLEQARGDRKI-VIANFSARWCSPCKIIAPYYCELSEKYPSIMFLV-IDVD 121
Query: 141 EEYEFAHDMQVRGLPTLFFI 160
E +F+ ++ PT FF+
Sbjct: 122 ELTDFSTSWDIKATPTFFFL 141
>IMGA|Medtr4g154660.1 Thioredoxin domain 2;
chr04_pseudomolecule_IMGAG_V3 38026185-38029591 F
EGN_Mt090430 20090702
Length = 364
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 102 IIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFIS 161
+++ F ATWCGPC ++ LA +Y+ + +KVD DE + A V +PT FF+
Sbjct: 279 LVLYFTATWCGPCRYISPLYTSLAEKYQ-RVVFLKVDIDEAVDVAARWNVSSVPTFFFVK 337
Query: 162 PDPKKDAI 169
+ D++
Sbjct: 338 NGKEVDSV 345
>IMGA|Medtr2g096730.1 Thioredoxin-like fold;
chr02_pseudomolecule_IMGAG_V3 22446155-22447878 F
EGN_Mt090430 20090702
Length = 122
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 74 KYVREDYLVKKKSAQEIQELVRGERN--VPIIIDFYATWCGPCILMAQELEMLAVEYESN 131
+Y+++ ++K S + + + N P+++ F A WC P I M + LA Y+ +
Sbjct: 5 EYLKKSKVIKIDSKKSWEHYISYATNQSYPVVVHFSAFWCVPSIQMNPFFQELASNYQ-D 63
Query: 132 AIIVKVDTDEEYEFAHDMQVRGLPTLFFISPDPKKDAI 169
+ + +D DE E A M+++ +PT F++ D I
Sbjct: 64 VLFLTLDVDEVKEIASKMEIKAIPTFLFLNGGTLVDKI 101
>IMGA|Medtr5g038910.1 Thioredoxin fold;
chr05_pseudomolecule_IMGAG_V3 16442765-16441840 E
EGN_Mt090430 20090702
Length = 126
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 97 ERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPT 156
E N ++IDF A WCGPC +M ++ A +Y ++ +K+D DE + QV LPT
Sbjct: 38 ETNKLMVIDFTAKWCGPCKVMDPVMKDFAAKY-TDVEFIKLDVDELMGVSQTFQVHSLPT 96
Query: 157 LFFI 160
I
Sbjct: 97 FLLI 100
>IMGA|Medtr1g028610.1 Thioredoxin-related; Thioredoxin domain 2;
chr01_pseudomolecule_IMGAG_V3 7031623-7033748 E
EGN_Mt090430 20090702
Length = 120
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 102 IIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTLFFIS 161
I++DF A+WCGPC +A L +A + I +KVD DE A + V +PT F+
Sbjct: 31 IVVDFTASWCGPCRFIAPILAEIAKKI-PEVIFLKVDIDEVKSVAKEWSVEAMPTFLFLK 89
Query: 162 PDPKKDAI 169
+ D +
Sbjct: 90 EGKEVDKV 97
>IMGA|Medtr2g110450.1 Disulphide isomerase; Thioredoxin-related;
Thioredoxin-like fold chr02_pseudomolecule_IMGAG_V3
25958849-25962960 E EGN_Mt090430 20090702
Length = 564
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 98 RNVPIIIDFYATWCGPCILMAQELEMLAVEYES-NAIIVKVDTDEEYEFAHDMQVRGLPT 156
+N ++++FYA WCG C +A E A E + N I+ K+D E+ E A V+G PT
Sbjct: 94 KNRFVLVEFYAPWCGHCQALAPEYAAAATELKGDNVILAKLDATEDNEVAQKFDVQGFPT 153
Query: 157 -LFFI 160
LFFI
Sbjct: 154 ILFFI 158
>IMGA|Medtr4g111230.1 Thioredoxin fold;
chr04_pseudomolecule_IMGAG_V3 25384754-25382296 F
EGN_Mt090430 20090702
Length = 126
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 98 RNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDEEYEFAHDMQVRGLPTL 157
+ P+++ F A WC P I M E LA Y+ + + +KVD DE E A +++ +PT
Sbjct: 31 KGYPVMVHFSAYWCVPSIAMDPFFEELASTYQ-DVLFLKVDVDEVKEVASKLEINAMPTF 89
Query: 158 FFIS 161
+S
Sbjct: 90 LLMS 93
>IMGA|Medtr4g081690.1 Disulphide isomerase; Thioredoxin-related;
Thioredoxin domain 2 chr04_pseudomolecule_IMGAG_V3
17149203-17143936 F EGN_Mt090430 20090702
Length = 583
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 97 ERNVPIIIDFYATWCGPCILMAQELEMLAVEYESNAIIV-KVDTDEEYEFAHDMQVRGLP 155
E N ++++FYA WCG C +A E A E + + +++ KVD E E A++ V+G P
Sbjct: 115 ENNQFVMVEFYAPWCGHCQALAPEYAAAATELKKDGVVLAKVDASVENELAYEYNVQGFP 174
Query: 156 TLFF 159
T++F
Sbjct: 175 TVYF 178
>IMGA|Medtr8g116230.1 Thioredoxin domain 2;
chr08_pseudomolecule_IMGAG_V3 26291320-26294959 F
EGN_Mt090430 20090702
Length = 139
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 81 LVKKKSAQEIQELVRGERNVPIII-DFYATWCGPCILMAQELEMLAVEYESNAIIVKVDT 139
L+ K A + Q+L +++ I+I +F A WCGPC ++A ++ +Y S ++ VD
Sbjct: 28 LITTKEAWD-QKLEEAKKDGKIVIANFSAVWCGPCKVIAPYYCEMSEKYTSMMFLL-VDV 85
Query: 140 DEEYEFAHDMQVRGLPTLFFI 160
DE +F+ ++ PT FF+
Sbjct: 86 DELTDFSTSWDIKATPTFFFL 106