Jatropha Genome Database

JcCB0010741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0010741.10 + phase: 1 /partial
         (151 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g083990.1 Pyruvate carboxylase; chr01_pseudomolecule_...   108   1e-24
IMGA|Medtr1g083990.2 Pyruvate carboxylase chr01_pseudomolecule_I...   107   3e-24

>IMGA|Medtr1g083990.1 Pyruvate carboxylase;
           chr01_pseudomolecule_IMGAG_V3 16754129-16762885 F
           EGN_Mt090430 20090702
          Length = 743

 Score =  108 bits (270), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 67/97 (69%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           F++KIGL LS+D+E+QH  K E++  P+G+                    E GQPVLVLE
Sbjct: 645 FKEKIGLTLSEDEESQHKPKSESSGVPRGAVVAPMAGLVVKVLVKNETRVEVGQPVLVLE 704

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           AMKMEHVVKAP +GYVHGLQVT G+QVSD ++LF++K
Sbjct: 705 AMKMEHVVKAPSSGYVHGLQVTVGEQVSDGSVLFNVK 741


>IMGA|Medtr1g083990.2 Pyruvate carboxylase
           chr01_pseudomolecule_IMGAG_V3 16754129-16762885 F
           EGN_Mt090430 20090702
          Length = 413

 Score =  107 bits (266), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 67/97 (69%)

Query: 43  FRQKIGLDLSDDDETQHTTKFETASHPQGSXXXXXXXXXXXXXXXXXXXXEEGQPVLVLE 102
           F++KIGL LS+D+E+QH  K E++  P+G+                    E GQPVLVLE
Sbjct: 315 FKEKIGLTLSEDEESQHKPKSESSGVPRGAVVAPMAGLVVKVLVKNETRVEVGQPVLVLE 374

Query: 103 AMKMEHVVKAPLAGYVHGLQVTAGQQVSDSTLLFSIK 139
           AMKMEHVVKAP +GYVHGLQVT G+QVSD ++LF++K
Sbjct: 375 AMKMEHVVKAPSSGYVHGLQVTVGEQVSDGSVLFNVK 411