Jatropha Genome Database

JcCB0010451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0010451.20 + phase: 0 
         (501 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC225517_3.1 Tocopherol cyclase, chloroplast precursor, put...   719   0.0  

>IMGA|AC225517_3.1 Tocopherol cyclase, chloroplast precursor,
           putative AC225517.6 12507-17093 E EGN_Mt090430 20090702
          Length = 480

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/444 (75%), Positives = 396/444 (89%), Gaps = 3/444 (0%)

Query: 59  IFVSNSVTNPETEFLSSVSPVYAPTPPNRELRTPHSGYHFDGTTRQFFEGWYFKVSIPER 118
           I   NS T  E +   S  P+Y+PTPPNR+LRTPHSGYHFDGT R+FFEGWYFKVSIPE+
Sbjct: 39  IIAHNSHT--EQQQSQSSKPIYSPTPPNRQLRTPHSGYHFDGTARKFFEGWYFKVSIPEK 96

Query: 119 KQSFCFMYSLENPAFRKKLTPFEVAQHGPRSTGVGAQILGAYDKYICQHVEESQNFWGNR 178
           +QSFCFMYS+ENPAFRK+L+  E+AQ+GPR TGVGAQILGA DKYICQ+  +S NFWG+R
Sbjct: 97  RQSFCFMYSVENPAFRKELSTLELAQYGPRFTGVGAQILGADDKYICQYTPQSPNFWGSR 156

Query: 179 HELVLGNTFVAEKGMQPPTKEVPPQDFSRRVSEGFQVTPLWHQGFIRDDGRSDYVQTVKT 238
           +EL+LGNTF A++  +PP KEVPP++F+ +V EGFQVTPLW+QGFI DDGRSDYV+TVKT
Sbjct: 157 NELMLGNTFAAKQNSKPPNKEVPPKEFNDKVLEGFQVTPLWNQGFICDDGRSDYVETVKT 216

Query: 239 ARWEYSTRPVYGWGDVGSKQKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERFEFK 298
           ARWEYSTRPVYGWGDVGS QKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGER EF+
Sbjct: 217 ARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERIEFE 276

Query: 299 DAPSYSEKNWGAGFPRKWFWV-QCNVFEGAIGEVALTAAGGLRQLPGLTENFESAALIGV 357
           +APSYSEKNWG  FPR  F + QCNVFEGA GE+ALTAAGGLRQ+PGLTE FE+AALIG+
Sbjct: 277 NAPSYSEKNWGGAFPRNGFGIAQCNVFEGASGEIALTAAGGLRQIPGLTETFENAALIGI 336

Query: 358 HYEGIFYEFVPWNGVLNWEISPWGYWFITAENKSHLVELKATTKDPGTTLRAPTTESGFA 417
           HY G FYEFVPWNGV++WE++ WGYWF++A+N +++VEL+ATT+DPGTTLRAPT+E+G +
Sbjct: 337 HYGGKFYEFVPWNGVVSWEVATWGYWFMSADNGNYVVELEATTEDPGTTLRAPTSEAGLS 396

Query: 418 PACKDTCFGDLKLQIWERRYDGTKGKMILDVTSDMAAVEVGGGPWFNTWKGKTTTPELLN 477
            ACKDTCFG LKL++WERRYDG+KGK+ILDVTSDMAA+EVGGGPWFNTWKGKT+TP +L+
Sbjct: 397 QACKDTCFGILKLKLWERRYDGSKGKIILDVTSDMAALEVGGGPWFNTWKGKTSTPPVLS 456

Query: 478 RALNVPVDVEGIFNFLPLFKPPGL 501
           RA+ +PVDV+G++N  PLFKPPGL
Sbjct: 457 RAIGLPVDVDGLYNLFPLFKPPGL 480