Jatropha Genome Database

JcCB0009541.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0009541.30 + phase: 0 
         (208 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g019890.1 Transcriptional coactivator/pterin dehydrat...   105   1e-23

>IMGA|Medtr5g019890.1 Transcriptional coactivator/pterin dehydratase
           chr05_pseudomolecule_IMGAG_V3 7447395-7450575 E
           EGN_Mt090430 20090702
          Length = 148

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 3/126 (2%)

Query: 81  PNISALSLAQQQCTPVSP--LQAPIDKDDAQKLLKKVLGWRLLEEENGLKLQCLWKLRDF 138
           PN  +  L+ + C P +   LQ P+ +D A  L+ +V  W L+ E   LKL   WK++ F
Sbjct: 21  PNKDSNDLSTKTCVPCNAKDLQ-PMTQDAANALIAQVSDWNLVNESGTLKLSRSWKVKSF 79

Query: 139 KCGVELINRIYKVAEASGHFPDLHLVDTNQVRAELWTSSIGGLSMNDFIVAAKMDEIKTS 198
             G+E    I  +AEA GH PDLHLV  N V  E+WT S+GGL+ NDFI+AAK++E+   
Sbjct: 80  NKGLEFFRIIADLAEAEGHHPDLHLVGWNNVTVEIWTHSVGGLTENDFILAAKINELNVH 139

Query: 199 DLVPRK 204
            L+ RK
Sbjct: 140 GLLRRK 145