Jatropha Genome Database
- JcCB0009521.40
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0009521.40 - phase: 0 /partial
(231 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase chr04_ps... 316 6e-87
IMGA|Medtr8g018580.1 Prenyltransferase/squalene oxidase chr08_ps... 299 9e-82
IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase chr05_ps... 261 2e-70
IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase chr06_ps... 239 8e-64
IMGA|Medtr6g099000.2 Prenyltransferase/squalene oxidase chr06_ps... 239 1e-63
IMGA|Medtr8g018520.1 Prenyltransferase/squalene oxidase chr08_ps... 210 5e-55
IMGA|Medtr8g018630.1 Prenyltransferase/squalene oxidase chr08_ps... 195 1e-50
IMGA|Medtr8g018540.1 Prenyltransferase/squalene oxidase chr08_ps... 189 1e-48
IMGA|Medtr4g163370.2 Prenyltransferase/squalene oxidase chr04_ps... 138 2e-33
IMGA|Medtr8g018640.1 Prenyltransferase/squalene oxidase chr08_ps... 136 8e-33
IMGA|Medtr8g018550.1 Prenyltransferase/squalene oxidase chr08_ps... 100 4e-22
>IMGA|Medtr4g163370.1 Prenyltransferase/squalene oxidase
chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E
EGN_Mt090430 20090702
Length = 771
Score = 316 bits (809), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/250 (63%), Positives = 182/250 (72%), Gaps = 27/250 (10%)
Query: 3 LSSDLCDEIGPTLKEGHNFLKNSQ-----------MFRHISKGAWAFSDKDHGWQVSDCT 51
L+++L DEI P L +GH+F+K SQ M RHISKG+W FSD+DHGWQVSDCT
Sbjct: 428 LAANLNDEIEPALAKGHDFIKKSQVTENPSGDFKSMHRHISKGSWTFSDQDHGWQVSDCT 487
Query: 52 AESLKCCLLFSMMPPEIVGEKMVPEKLYDSINVILSLQ---------SKNGGFPAWEPAG 102
AE LKCCLL SM+PPEIVGEKM PE+LYDS+NV+LSLQ SK GG AWEPAG
Sbjct: 488 AEGLKCCLLLSMLPPEIVGEKMEPERLYDSVNVLLSLQAMQMTLITYSKKGGLAAWEPAG 547
Query: 103 AVSWLELLNPVEFLEDIVIEHD-------TPQGLLLFKKLYPEHRKEEVENSILNAVQYI 155
A WLELLNP EF DIV+EH+ Q L+LFKKLYP HRK+E+EN I AV++I
Sbjct: 548 AQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFISEAVRFI 607
Query: 156 ESIQKPDGSWYGNWGVCFTYGTWFALRGLAAAGKTYDNSVATQRGVDFLLKLQCDDGGWG 215
E IQ DGSWYGNWGVCFTYG+WFAL GLAAAGKTY N A ++ V FLL Q +DGGWG
Sbjct: 608 EDIQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVKFLLTTQREDGGWG 667
Query: 216 ESYLSCAMKV 225
ESYLS K+
Sbjct: 668 ESYLSSPKKI 677
>IMGA|Medtr8g018580.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3402335-3399370 E
EGN_Mt090430 20090702
Length = 328
Score = 299 bits (765), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 138/217 (63%), Positives = 169/217 (77%), Gaps = 18/217 (8%)
Query: 27 MFRHISKGAWAFSDKDHGWQVSDCTAESLKCCLLFSMMPPEIVGEKMVPEKLYDSINVIL 86
M+RHISKG+W FSD+DHGWQVSDCTAE LKCCLL SM+ PEIVGEKM PE+LYDS+N++
Sbjct: 18 MYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLSPEIVGEKMEPERLYDSVNIMF 77
Query: 87 SLQS-----------KNGGFPAWEPAGAVSWLELLNPVEFLEDIVIEHD-------TPQG 128
SLQ+ K GG PAWEP+ A+ WLELLNP+EFLE+IV+E + + Q
Sbjct: 78 SLQASTTYYSLHYFGKKGGLPAWEPSKALEWLELLNPIEFLEEIVVEREYVECTSSSIQA 137
Query: 129 LLLFKKLYPEHRKEEVENSILNAVQYIESIQKPDGSWYGNWGVCFTYGTWFALRGLAAAG 188
++LFKKLYPEHRKEEVEN I AV+++E Q DGSWYGNWG+CFTYG+WFAL GL AAG
Sbjct: 138 MVLFKKLYPEHRKEEVENFIAKAVKFLEDKQTSDGSWYGNWGICFTYGSWFALGGLTAAG 197
Query: 189 KTYDNSVATQRGVDFLLKLQCDDGGWGESYLSCAMKV 225
KTY+N A ++ V FLL +Q +DGGWGES+LSC+ K+
Sbjct: 198 KTYENCAAIRKAVKFLLTIQREDGGWGESHLSCSKKI 234
>IMGA|Medtr5g008860.1 Prenyltransferase/squalene oxidase
chr05_pseudomolecule_IMGAG_V3 1770254-1758822 E
EGN_Mt090430 20090702
Length = 757
Score = 261 bits (667), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 165/243 (67%), Gaps = 18/243 (7%)
Query: 3 LSSDLCDEIGPTLKEGHNFLKNSQM-----------FRHISKGAWAFSDKDHGWQVSDCT 51
+S++L +E GPTL++ H F+KNSQ+ +RHISKGAW FS DHGW +SDCT
Sbjct: 426 ISTNLIEEFGPTLRKAHTFIKNSQVSEDCPGDLSKWYRHISKGAWPFSTADHGWPISDCT 485
Query: 52 AESLKCCLLFSMMPPEIVGEKMVPEKLYDSINVILSLQSKNGGFPAWEPAGAVSWLELLN 111
AE LK LL S + PEIVGE + ++LYD++NVI+SLQ+++GG +E + SWLE+ N
Sbjct: 486 AEGLKAVLLLSKIAPEIVGEPLDAKRLYDAVNVIISLQNEDGGLATYELTRSYSWLEICN 545
Query: 112 PVEFLEDIVIEHD-------TPQGLLLFKKLYPEHRKEEVENSILNAVQYIESIQKPDGS 164
P E DIVI++ Q L F+KLYP HR+EE++ I A +IE IQ DGS
Sbjct: 546 PAETFGDIVIDYTYVECTSAAIQALSTFRKLYPGHRREEIQRCIEKAAAFIEKIQASDGS 605
Query: 165 WYGNWGVCFTYGTWFALRGLAAAGKTYDNSVATQRGVDFLLKLQCDDGGWGESYLSCAMK 224
WYG+WGVCFTYGTWF ++GL AAGK++ N ++ ++ DFLL Q GGWGESYLSC K
Sbjct: 606 WYGSWGVCFTYGTWFGVKGLIAAGKSFSNCLSIRKACDFLLSKQLPSGGWGESYLSCQNK 665
Query: 225 VIS 227
V S
Sbjct: 666 VYS 668
>IMGA|Medtr6g099000.1 Prenyltransferase/squalene oxidase
chr06_pseudomolecule_IMGAG_V3 21643111-21635981 H
EGN_Mt090430 20090702
Length = 772
Score = 239 bits (610), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 164/244 (67%), Gaps = 19/244 (7%)
Query: 3 LSSDLCDEIGPTLKEGHNFLKNSQM-----------FRHISKGAWAFSDKDHGWQVSDCT 51
L+++L DE G LK+ +NF+K SQ+ +RHISKG W FS +D+GW VSDCT
Sbjct: 441 LATNLDDEYGSMLKKANNFIKLSQVTMNSSGNTSCWYRHISKGGWPFSTQDNGWPVSDCT 500
Query: 52 AESLKCCLLFSMMPPEIVGEKMVPEKLYDSINVILSLQSKNGGFPAWEPAGAVSWLELLN 111
AE LK +L S +P E VG+ + E+L +++N+ILSLQ++NGGF ++E + +WLE +N
Sbjct: 501 AEGLKAAILLSNLPIESVGKAVETEQLCNAVNLILSLQNRNGGFASYELTRSYTWLEKIN 560
Query: 112 PVEFLEDIVIEHD-------TPQGLLLFKKLYPEHRKEEVENSILNAVQYIESIQKPDGS 164
P E EDI I++ QGL LF + P HRK E++ I+ YIESIQ DGS
Sbjct: 561 PTETFEDITIDYQYVECTSAAIQGLALFTQQNPRHRKMEIDICIVKTANYIESIQWADGS 620
Query: 165 WYGNWGVCFTYGTWFALRGLAAAGKTYDNSVATQRGVDFLLKLQCD-DGGWGESYLSCAM 223
WYG+WG+CFTYGTWF ++GL AAGK+Y +SV+ ++G +FLL Q GGWGESYLSC
Sbjct: 621 WYGSWGICFTYGTWFGIKGLIAAGKSYKDSVSIRKGCEFLLSKQHKLSGGWGESYLSCQH 680
Query: 224 KVIS 227
KV +
Sbjct: 681 KVYT 684
>IMGA|Medtr6g099000.2 Prenyltransferase/squalene oxidase
chr06_pseudomolecule_IMGAG_V3 21643111-21635981 H
EGN_Mt090430 20090702
Length = 684
Score = 239 bits (609), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 163/242 (67%), Gaps = 19/242 (7%)
Query: 3 LSSDLCDEIGPTLKEGHNFLKNSQM-----------FRHISKGAWAFSDKDHGWQVSDCT 51
L+++L DE G LK+ +NF+K SQ+ +RHISKG W FS +D+GW VSDCT
Sbjct: 441 LATNLDDEYGSMLKKANNFIKLSQVTMNSSGNTSCWYRHISKGGWPFSTQDNGWPVSDCT 500
Query: 52 AESLKCCLLFSMMPPEIVGEKMVPEKLYDSINVILSLQSKNGGFPAWEPAGAVSWLELLN 111
AE LK +L S +P E VG+ + E+L +++N+ILSLQ++NGGF ++E + +WLE +N
Sbjct: 501 AEGLKAAILLSNLPIESVGKAVETEQLCNAVNLILSLQNRNGGFASYELTRSYTWLEKIN 560
Query: 112 PVEFLEDIVIEHD-------TPQGLLLFKKLYPEHRKEEVENSILNAVQYIESIQKPDGS 164
P E EDI I++ QGL LF + P HRK E++ I+ YIESIQ DGS
Sbjct: 561 PTETFEDITIDYQYVECTSAAIQGLALFTQQNPRHRKMEIDICIVKTANYIESIQWADGS 620
Query: 165 WYGNWGVCFTYGTWFALRGLAAAGKTYDNSVATQRGVDFLLKLQCD-DGGWGESYLSCAM 223
WYG+WG+CFTYGTWF ++GL AAGK+Y +SV+ ++G +FLL Q GGWGESYLSC
Sbjct: 621 WYGSWGICFTYGTWFGIKGLIAAGKSYKDSVSIRKGCEFLLSKQHKLSGGWGESYLSCQH 680
Query: 224 KV 225
KV
Sbjct: 681 KV 682
>IMGA|Medtr8g018520.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3367543-3364864 E
EGN_Mt090430 20090702
Length = 271
Score = 210 bits (534), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 126/178 (70%), Gaps = 9/178 (5%)
Query: 55 LKCCLLFSMMPPEIVGEKMVPEKLYDSINVILSLQSKNGGFPAWEPAGAVSWLELLNPVE 114
+CCLL SM+PP+IVGE + PE+LYDS+N +LSLQ + G AWEPAG WLEL NP E
Sbjct: 2 FQCCLLLSMLPPKIVGEMVEPERLYDSVNFVLSLQER--GLSAWEPAGGQEWLELFNPSE 59
Query: 115 FLEDIVIEHD-------TPQGLLLFKKLYPEHRKEEVENSILNAVQYIESIQKPDGSWYG 167
DIV+EH+ Q L+LFKKLYPE++ +E++N I NAV++IES Q DGSWYG
Sbjct: 60 SFSDIVVEHEYVECTGSAIQALVLFKKLYPEYKTKEIDNFIANAVRFIESSQTIDGSWYG 119
Query: 168 NWGVCFTYGTWFALRGLAAAGKTYDNSVATQRGVDFLLKLQCDDGGWGESYLSCAMKV 225
NWG+CF YG++FAL GL GKTY N A + FL +++ +DGGWGESYL C+ K
Sbjct: 120 NWGICFIYGSFFALGGLEDPGKTYTNCPAIAKATKFLFQIRREDGGWGESYLFCSQKT 177
>IMGA|Medtr8g018630.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3433864-3431665 E
EGN_Mt090430 20090702
Length = 244
Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 111/142 (78%), Gaps = 7/142 (4%)
Query: 91 KNGGFPAWEPAGAVSWLELLNPVEFLEDIVIEHD-------TPQGLLLFKKLYPEHRKEE 143
K GG PAWEP+ A+ WLELLNP+EFLE+ V+E + + Q ++LFKK+YPEHRKEE
Sbjct: 9 KKGGLPAWEPSKALEWLELLNPIEFLEENVVEREYVECTSSSIQAMVLFKKIYPEHRKEE 68
Query: 144 VENSILNAVQYIESIQKPDGSWYGNWGVCFTYGTWFALRGLAAAGKTYDNSVATQRGVDF 203
VEN I AVQ++E Q DGSWYGNWG+CFTYG+WFAL GLA AGKTY+N VA ++ V F
Sbjct: 69 VENFIAKAVQFLEDKQTSDGSWYGNWGICFTYGSWFALGGLAVAGKTYENCVAIRKAVKF 128
Query: 204 LLKLQCDDGGWGESYLSCAMKV 225
LL +Q +DGGWGES+LSC+ K+
Sbjct: 129 LLTIQREDGGWGESHLSCSKKI 150
>IMGA|Medtr8g018540.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3381520-3378979 E
EGN_Mt090430 20090702
Length = 221
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 110/143 (76%), Gaps = 7/143 (4%)
Query: 92 NGGFPAWEPAGAVSWLELLNPVEFLEDIVIEHD-------TPQGLLLFKKLYPEHRKEEV 144
GG PAWEP+ A+ WLELLNP+EFLE+IV+E + + Q ++LFKK+YPEHRKEEV
Sbjct: 25 KGGLPAWEPSEALEWLELLNPIEFLEEIVVEREYVECTSSSIQAMVLFKKIYPEHRKEEV 84
Query: 145 ENSILNAVQYIESIQKPDGSWYGNWGVCFTYGTWFALRGLAAAGKTYDNSVATQRGVDFL 204
EN I AV+++E Q DGSWYGNWG+CFTYG+WFAL GL AAGKTY+N A ++ V FL
Sbjct: 85 ENFIAKAVKFLEDKQTSDGSWYGNWGICFTYGSWFALGGLTAAGKTYENCAAIRKAVKFL 144
Query: 205 LKLQCDDGGWGESYLSCAMKVIS 227
L +Q +DGGWGES+LS + K+ +
Sbjct: 145 LTIQREDGGWGESHLSSSKKIYA 167
>IMGA|Medtr4g163370.2 Prenyltransferase/squalene oxidase
chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E
EGN_Mt090430 20090702
Length = 527
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 79/100 (79%), Gaps = 11/100 (11%)
Query: 3 LSSDLCDEIGPTLKEGHNFLKNSQ-----------MFRHISKGAWAFSDKDHGWQVSDCT 51
L+++L DEI P L +GH+F+K SQ M RHISKG+W FSD+DHGWQVSDCT
Sbjct: 428 LAANLNDEIEPALAKGHDFIKKSQVTENPSGDFKSMHRHISKGSWTFSDQDHGWQVSDCT 487
Query: 52 AESLKCCLLFSMMPPEIVGEKMVPEKLYDSINVILSLQSK 91
AE LKCCLL SM+PPEIVGEKM PE+LYDS+NV+LSLQ+K
Sbjct: 488 AEGLKCCLLLSMLPPEIVGEKMEPERLYDSVNVLLSLQAK 527
>IMGA|Medtr8g018640.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3438770-3434408 E
EGN_Mt090430 20090702
Length = 494
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 80/101 (79%), Gaps = 11/101 (10%)
Query: 3 LSSDLCDEIGPTLKEGHNFLKNSQ-----------MFRHISKGAWAFSDKDHGWQVSDCT 51
L+++L ++IG TL +GH ++KNSQ M+RHISKG+W FSD+DHGWQVSDCT
Sbjct: 394 LATNLVEDIGSTLAKGHEYIKNSQVRDNPSGDFESMYRHISKGSWTFSDQDHGWQVSDCT 453
Query: 52 AESLKCCLLFSMMPPEIVGEKMVPEKLYDSINVILSLQSKN 92
AE LKCCLL SM+PPEIVGEKM PE+LYDS+N++ SLQ+ +
Sbjct: 454 AEGLKCCLLLSMLPPEIVGEKMEPERLYDSVNILFSLQANS 494
>IMGA|Medtr8g018550.1 Prenyltransferase/squalene oxidase
chr08_pseudomolecule_IMGAG_V3 3386915-3381869 E
EGN_Mt090430 20090702
Length = 564
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 18/106 (16%)
Query: 3 LSSDLCDEIGPTLKEGHNFLKNSQ-----------MFRHISKGAWAFSDKDHGWQVSDCT 51
L+++L ++IGPTL +GH F+K SQ M+RH+SKG+W FSD+DHGW VSDCT
Sbjct: 422 LATNLTEDIGPTLAKGHEFIKKSQVRDNPSGDYESMYRHMSKGSWTFSDQDHGWSVSDCT 481
Query: 52 AESLKCCLLFSMMPPEIV-------GEKMVPEKLYDSINVILSLQS 90
AE LK +++ + GEKM PE+LYD++N++ SLQ+
Sbjct: 482 AEGLKVTNQLTIVLSAFIDAASGDCGEKMEPERLYDAVNILFSLQA 527