Jatropha Genome Database

JcCB0008691.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008691.20 + phase: 0 
         (248 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g049880.1 ZIM chr02_pseudomolecule_IMGAG_V3 13730798-...   159   1e-39
IMGA|Medtr8g132760.1 ZIM chr08_pseudomolecule_IMGAG_V3 31444722-...    92   3e-19
IMGA|Medtr8g132550.1 ZIM chr08_pseudomolecule_IMGAG_V3 31344074-...    82   2e-16
IMGA|Medtr5g013690.1 ZIM chr05_pseudomolecule_IMGAG_V3 4173198-4...    77   5e-15
IMGA|Medtr5g013690.2 ZIM chr05_pseudomolecule_IMGAG_V3 4173198-4...    77   6e-15
IMGA|Medtr5g013680.1 ZIM chr05_pseudomolecule_IMGAG_V3 4167900-4...    74   7e-14
IMGA|Medtr5g013670.1 ZIM chr05_pseudomolecule_IMGAG_V3 4162376-4...    69   2e-12
IMGA|Medtr2g049880.2 ZIM chr02_pseudomolecule_IMGAG_V3 13730798-...    67   5e-12
IMGA|Medtr5g013650.1 ZIM chr05_pseudomolecule_IMGAG_V3 4156365-4...    67   7e-12
IMGA|Medtr8g132780.1 ZIM chr08_pseudomolecule_IMGAG_V3 31448106-...    50   8e-07
IMGA|Medtr8g132530.1 ZIM chr08_pseudomolecule_IMGAG_V3 31340691-...    50   8e-07

>IMGA|Medtr2g049880.1 ZIM chr02_pseudomolecule_IMGAG_V3
           13730798-13733425 E EGN_Mt090430 20090702
          Length = 253

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 141/251 (56%), Gaps = 28/251 (11%)

Query: 1   MASSPEFVEFAGQKA-SRSPEKSNFSQTCSLLSQYLKERGSFGDLSLGMTCNGEGSGNGS 59
           M++S E+ E +G K  ++SPEK+ FSQTCSLLSQY+KE+G F DLSLG+TCN     N +
Sbjct: 1   MSTSSEYSEVSGNKPPAKSPEKTTFSQTCSLLSQYIKEKGCFKDLSLGITCN----NNNT 56

Query: 60  TP--ETLHQTAAATTMNLFPMNDKQDDISSRKMAASRTNFRSMDLFPQQAGFAPKEETQK 117
            P   +   + +ATTMNLFP    ++++S +       N  +MDL   QA          
Sbjct: 57  DPSGSSETSSQSATTMNLFP--TMENNLSQK-------NLTTMDLLTPQAA--------- 98

Query: 118 KVDSRAATPEPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSSQNFTRFPSAPVKS 177
            +++  A   P+ AQ+T+FY G+VIVF+DFPADKA+E+M  A+KG SQ+         +S
Sbjct: 99  -LNNSNAIKGPKAAQLTMFYNGQVIVFDDFPADKAQELMAFANKGISQSQNNSVYTYTQS 157

Query: 178 VSPVFAPNAAARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLPIARRAS 237
             P F PN   R ++                      + +H+Q   +    DLPI R+AS
Sbjct: 158 -QPSFPPN-LVRTSVNTTTPIVPTVNIIPSTATGTGSMNEHLQVPSRPNLCDLPIMRKAS 215

Query: 238 LQRFLEKRKDR 248
           L RFLEKRKDR
Sbjct: 216 LHRFLEKRKDR 226


>IMGA|Medtr8g132760.1 ZIM chr08_pseudomolecule_IMGAG_V3
           31444722-31446420 F EGN_Mt090430 20090702
          Length = 203

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 107/257 (41%), Gaps = 97/257 (37%)

Query: 1   MASSPEFVEFAGQKASRSPEKSNFSQTCSLLSQYLKE-RGSFGDLSLGMTCNGEGSGNGS 59
           M++S +    +G K ++S EK  FSQTC+LL QYLKE +GSF   +L             
Sbjct: 1   MSTSSDISGLSGNKLTKSSEKPTFSQTCNLLRQYLKEKKGSFEGFNL------------H 48

Query: 60  TPET-----LHQTAAATTMNLFPMNDKQDDISSRKMAASRTNFRSMDLFPQQAGFAPKEE 114
           TPET        + +  TM+LFP N             +  N  +MD F           
Sbjct: 49  TPETNGSSPGSSSHSGITMDLFPTN------------VTPKNLTTMDFF----------- 85

Query: 115 TQKKVDSRAATP---EPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSSQNFTRFP 171
                  R   P   EP+TAQ+T+FY G+VIV +DFPA+K +E+   A   +        
Sbjct: 86  -----FPRVVNPMVKEPETAQLTMFYNGQVIVLDDFPAEKVEELKSFARTQTQH------ 134

Query: 172 SAPVKSVSPVFAPNAAARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLP 231
                S  P   P                                   Q  P  I  D+P
Sbjct: 135 -----SDVPTMIP-----------------------------------QQPPSLI--DMP 152

Query: 232 IARRASLQRFLEKRKDR 248
           IAR+ASL+RF+EKRKDR
Sbjct: 153 IARKASLRRFMEKRKDR 169


>IMGA|Medtr8g132550.1 ZIM chr08_pseudomolecule_IMGAG_V3
           31344074-31342377 E EGN_Mt090430 20090702
          Length = 189

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 98/251 (39%), Gaps = 99/251 (39%)

Query: 1   MASSPEFVEFAGQKASRSPEKSNFSQTCSLLSQYLKERGSFGDLSLGMTCNGEGSGNGST 60
           M++S +    +G K ++S EK  FSQTC+LL QYLKE+                      
Sbjct: 1   MSTSSDISGLSGNKLTKSSEKPTFSQTCNLLRQYLKEKKGSS------------------ 42

Query: 61  PETLHQTAAATTMNLFPMNDKQDDISSRKMAASRTNFRSMDLFPQQAGFAPKEETQKKVD 120
                 + +  TM+LFP N             +  N  +MD F                 
Sbjct: 43  --PGSSSHSGITMDLFPTN------------VTPKNLTTMDFF----------------F 72

Query: 121 SRAATP---EPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSSQNFTRFPSAPVKS 177
            R   P   EP+TAQ+T+FY G+VIV +DFPA+K +E+   A   +             S
Sbjct: 73  PRVVNPMVKEPETAQLTMFYNGQVIVLDDFPAEKVEELKSFARTQTQH-----------S 121

Query: 178 VSPVFAPNAAARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLPIARRAS 237
             P   P                                   Q  P  I  D+PIAR+AS
Sbjct: 122 DVPTMIP-----------------------------------QQPPSLI--DMPIARKAS 144

Query: 238 LQRFLEKRKDR 248
           L+RF+EKRKDR
Sbjct: 145 LRRFMEKRKDR 155


>IMGA|Medtr5g013690.1 ZIM chr05_pseudomolecule_IMGAG_V3
           4173198-4174592 E EGN_Mt090430 20090702
          Length = 173

 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 60/122 (49%), Gaps = 30/122 (24%)

Query: 127 EPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSSQNFTRFPSAPVKSVSPVFAPNA 186
           EP  AQMTIFY GKVIVF+D PADKAK+IM  ++KG            + S S     N 
Sbjct: 39  EPSCAQMTIFYDGKVIVFDDVPADKAKDIMDFSTKG------------IASTSQNHNNNY 86

Query: 187 AARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLPIARRASLQRFLEKRK 246
           A    +                      +QD+ Q     +  DLP+ R+ASL RFLEKRK
Sbjct: 87  AYSSFLSRNS------------------LQDYPQVPSIPVIYDLPMTRKASLHRFLEKRK 128

Query: 247 DR 248
           DR
Sbjct: 129 DR 130


>IMGA|Medtr5g013690.2 ZIM chr05_pseudomolecule_IMGAG_V3
           4173198-4174592 E EGN_Mt090430 20090702
          Length = 130

 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 60/122 (49%), Gaps = 30/122 (24%)

Query: 127 EPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSSQNFTRFPSAPVKSVSPVFAPNA 186
           EP  AQMTIFY GKVIVF+D PADKAK+IM  ++KG            + S S     N 
Sbjct: 39  EPSCAQMTIFYDGKVIVFDDVPADKAKDIMDFSTKG------------IASTSQNHNNNY 86

Query: 187 AARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLPIARRASLQRFLEKRK 246
           A    +                      +QD+ Q     +  DLP+ R+ASL RFLEKRK
Sbjct: 87  AYSSFLSRNS------------------LQDYPQVPSIPVIYDLPMTRKASLHRFLEKRK 128

Query: 247 DR 248
           DR
Sbjct: 129 DR 130


>IMGA|Medtr5g013680.1 ZIM chr05_pseudomolecule_IMGAG_V3
           4167900-4170009 F EGN_Mt090430 20090702
          Length = 175

 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 58/122 (47%), Gaps = 30/122 (24%)

Query: 127 EPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSSQNFTRFPSAPVKSVSPVFAPNA 186
           EP+ AQMTI Y GKVIVF+D PADKAK+IM  ++KG            + S S     N 
Sbjct: 39  EPKCAQMTILYDGKVIVFDDVPADKAKDIMDFSTKG------------ITSTSQHHNNNY 86

Query: 187 AARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLPIARRASLQRFLEKRK 246
           A    +                      +QD  Q        DLP+ R+ASL RFLEKRK
Sbjct: 87  AYSSFLARNS------------------LQDCYQVPSIPAIYDLPMTRKASLHRFLEKRK 128

Query: 247 DR 248
           DR
Sbjct: 129 DR 130


>IMGA|Medtr5g013670.1 ZIM chr05_pseudomolecule_IMGAG_V3
           4162376-4163981 E EGN_Mt090430 20090702
          Length = 148

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 40/130 (30%)

Query: 127 EPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSS-------QNFT-RFPSAPVKSV 178
           EP+  QMTIFY GK+IVF+D PA+K ++IM  +S+G++        N+  RF  +     
Sbjct: 17  EPKCTQMTIFYDGKIIVFDDIPAEKVEDIMVFSSEGTTTSRNHKNNNYAFRFAQS----- 71

Query: 179 SPVFAPNAAARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLPIARRASL 238
            P F    +A  +++                         +  SP  +  DLP+ R+ASL
Sbjct: 72  HPSFLARNSANNSVQ-------------------------VPSSP--VIYDLPMTRKASL 104

Query: 239 QRFLEKRKDR 248
            RFLEKRKDR
Sbjct: 105 HRFLEKRKDR 114


>IMGA|Medtr2g049880.2 ZIM chr02_pseudomolecule_IMGAG_V3
           13730798-13733425 E EGN_Mt090430 20090702
          Length = 169

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 28/142 (19%)

Query: 135 IFYAGKVIVFNDFPADKAKEIMQLASKGSSQN-------FTR----FPSAPVKSVSPVFA 183
           +FY G+VIVF+DFPADKA+E+M  A+KG SQ+       +T+    FP   V++      
Sbjct: 1   MFYNGQVIVFDDFPADKAQELMAFANKGISQSQNNSVYTYTQSQPSFPPNLVRTSVNTTT 60

Query: 184 PNAAARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTI----------------- 226
           P       I                     L  + ++P P  I                 
Sbjct: 61  PIVPTVNIIPSTATGTGSMNEHLQVPSRPNLCGNFLKPLPLKIRMTRKIGSCFSDHEFSL 120

Query: 227 TSDLPIARRASLQRFLEKRKDR 248
            +DLPI R+ASL RFLEKRKDR
Sbjct: 121 CADLPIMRKASLHRFLEKRKDR 142


>IMGA|Medtr5g013650.1 ZIM chr05_pseudomolecule_IMGAG_V3
           4156365-4156970 H EGN_Mt090430 20090702
          Length = 137

 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 60/129 (46%), Gaps = 35/129 (27%)

Query: 127 EPQTAQMTIFYAGKVIVFNDFPADKAKEIMQLASKGSS-------QNFTRFPSAPVKSVS 179
           EP+ AQMTIFY GKVIVF+D PA+K K IM   +KG++        N   +     +S  
Sbjct: 37  EPRCAQMTIFYDGKVIVFDDIPAEKVKGIMVFCTKGTTPTSHSQNHNNNNYAFRFAQSNP 96

Query: 180 PVFAPNAAARPTIEXXXXXXXXXXXXXXXXXXXXLIQDHIQPSPQTITSDLPIARRASLQ 239
              A N+A                             + +Q     +  DLP+ R+ASL 
Sbjct: 97  SFLAINSA----------------------------NNSLQMPSTPVIYDLPMTRKASLH 128

Query: 240 RFLEKRKDR 248
           RFLEKRKDR
Sbjct: 129 RFLEKRKDR 137


>IMGA|Medtr8g132780.1 ZIM chr08_pseudomolecule_IMGAG_V3
           31448106-31449413 H EGN_Mt090430 20090702
          Length = 109

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 100 MDLFPQQA---GFAPKEETQKKVDSRAATPEPQTAQMTIFYAGKVIVFNDFPADKAKEIM 156
           MDLFP         P +    ++++ +   E +TAQ+T+FY G+VIV +DFPA+K +E+ 
Sbjct: 1   MDLFPTNVTPKNVTPVDSLSPRINN-SMVKELETAQLTLFYNGEVIVLDDFPAEKVEELK 59

Query: 157 QLAS 160
             AS
Sbjct: 60  SFAS 63


>IMGA|Medtr8g132530.1 ZIM chr08_pseudomolecule_IMGAG_V3
           31340691-31339384 H EGN_Mt090430 20090702
          Length = 109

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 100 MDLFPQQA---GFAPKEETQKKVDSRAATPEPQTAQMTIFYAGKVIVFNDFPADKAKEIM 156
           MDLFP         P +    ++++ +   E +TAQ+T+FY G+VIV +DFPA+K +E+ 
Sbjct: 1   MDLFPTNVTPKNVTPVDSLSPRINN-SMVKELETAQLTLFYNGEVIVLDDFPAEKVEELK 59

Query: 157 QLAS 160
             AS
Sbjct: 60  SFAS 63