Jatropha Genome Database

JcCB0008631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008631.10 - phase: 0 
         (446 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g013060.1 Fatty acid desaturase chr04_pseudomolecule_...   662   0.0  
IMGA|Medtr5g079460.1 Fatty acid desaturase chr05_pseudomolecule_...   534   e-152
IMGA|Medtr7g111900.1 Fatty acid desaturase chr07_pseudomolecule_...   196   2e-50
IMGA|AC233577_39.1 Fatty acid desaturase AC233577.5 182710-18086...   156   2e-38
IMGA|Medtr8g145530.1 Fatty acid desaturase chr08_pseudomolecule_...   121   6e-28

>IMGA|Medtr4g013060.1 Fatty acid desaturase
           chr04_pseudomolecule_IMGAG_V3 2464310-2468599 E
           EGN_Mt090430 20090702
          Length = 440

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/446 (73%), Positives = 358/446 (80%), Gaps = 7/446 (1%)

Query: 1   MASWVLSECGLKPLPQFFARPRTGAVLRTNSSKPRFLQTSKTVTDLRQPFSFGERSWRVK 60
           MA+  LSECGL+PLP  + +PRT  +     SK RFL  SKT   +     F  ++W ++
Sbjct: 1   MATMFLSECGLRPLPPLYPKPRTNTISFQKPSKIRFL--SKTTKRVSSDLRFKPKTWELR 58

Query: 61  VSAPYRVXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLSDIRAAIPKHCWVKDPWKS 120
           VSAP RV                       FDPGAPPPF L DIRAAIPKHCWVKDPWKS
Sbjct: 59  VSAPSRVAEEEEEKGGGGVVQEFPN-----FDPGAPPPFTLGDIRAAIPKHCWVKDPWKS 113

Query: 121 MSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLN 180
           MSYVVRD                    PLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLN
Sbjct: 114 MSYVVRDVVVVFGLAVVAAYVNSLFVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLN 173

Query: 181 SVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNITRKLRFTV 240
           SV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFR+LDN T+ LRFT+
Sbjct: 174 SVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRSLDNSTKMLRFTI 233

Query: 241 PFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMG 300
           PFPMLAYPFYLW+RSPGK GSHF P+SDLF+PNERKDVITST+CWTAMAALLVGL FVMG
Sbjct: 234 PFPMLAYPFYLWSRSPGKKGSHFDPNSDLFVPNERKDVITSTVCWTAMAALLVGLGFVMG 293

Query: 301 PIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWIN 360
           PIQLLKLYG+PY  FVMWLD VTYLHHHGHE+KLPWYRG EWSYLRGGLTTLDRDYG IN
Sbjct: 294 PIQLLKLYGVPYVLFVMWLDLVTYLHHHGHEDKLPWYRGQEWSYLRGGLTTLDRDYGLIN 353

Query: 361 NIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLIGSLVRSLR 420
           NIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLG+YY+EP+KS PLPFHLIG L++S++
Sbjct: 354 NIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGRYYKEPKKSSPLPFHLIGDLIKSMK 413

Query: 421 KDHYVSDTGDVVYYQTDRQLSGSTSE 446
           KDH+VSDTGDVVYYQTD  LSGS++ 
Sbjct: 414 KDHFVSDTGDVVYYQTDPNLSGSSTS 439


>IMGA|Medtr5g079460.1 Fatty acid desaturase
           chr05_pseudomolecule_IMGAG_V3 29627982-29625700 E
           EGN_Mt090430 20090702
          Length = 391

 Score =  534 bits (1375), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 248/356 (69%), Positives = 295/356 (82%)

Query: 91  FDPGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLY 150
           FDP APPPFK++DIRAAIPKHCWVK+ W+S+SYV+RD                    P+Y
Sbjct: 36  FDPSAPPPFKIADIRAAIPKHCWVKNTWRSLSYVLRDVVVVTALIVAAIRFDNWYFWPIY 95

Query: 151 WAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 210
           W  QGTMFWA+FVLGHDCGHGSFS++  +N+ VGH+LHSSILVPYHGWRISH+THHQNHG
Sbjct: 96  WPLQGTMFWAIFVLGHDCGHGSFSDSSLVNNFVGHILHSSILVPYHGWRISHKTHHQNHG 155

Query: 211 HVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLF 270
           +VE DESW PL EK++ +LDN+T+ +RF+VP P+ AYP YLW+RSPGK+GSHFHP SDLF
Sbjct: 156 NVERDESWVPLTEKVYNSLDNMTKFVRFSVPLPLFAYPIYLWSRSPGKSGSHFHPYSDLF 215

Query: 271 LPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGH 330
            PNERK+V  ST+CW  M +LL+ LSF   P+ +LKLYG+PYW FVMWLDFVTYLHHHG+
Sbjct: 216 SPNERKEVTVSTVCWLLMFSLLLYLSFTTSPLLILKLYGVPYWIFVMWLDFVTYLHHHGY 275

Query: 331 EEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAA 390
            +KLPWYRG EW+YLRGGLTT+DRDYGWINNIHHDIGTHV+HHLFPQIPHYHL+EAT+AA
Sbjct: 276 TQKLPWYRGQEWTYLRGGLTTVDRDYGWINNIHHDIGTHVVHHLFPQIPHYHLVEATKAA 335

Query: 391 KPVLGKYYREPEKSGPLPFHLIGSLVRSLRKDHYVSDTGDVVYYQTDRQLSGSTSE 446
           KP+ G YYREPEKS PLPFHLI  L++S+ +DH+VSDTGDVV+YQTD QL    +E
Sbjct: 336 KPIFGDYYREPEKSSPLPFHLIKYLLQSMNEDHFVSDTGDVVFYQTDPQLHKKHNE 391


>IMGA|Medtr7g111900.1 Fatty acid desaturase
           chr07_pseudomolecule_IMGAG_V3 26389378-26394723 E
           EGN_Mt090430 20090702
          Length = 392

 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/352 (36%), Positives = 178/352 (50%), Gaps = 27/352 (7%)

Query: 93  PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPL--- 149
           P   PPF LS I+ AIP HC+ +    S SYVV D                    PL   
Sbjct: 33  PFEKPPFSLSQIKKAIPPHCFKRSVIHSFSYVVYDLTIAFFLYYVATHYFQHLPRPLSFL 92

Query: 150 ----YWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTH 205
               YWA QG +   ++V+ H+CGH +FS+   L+  VG +LHS++LVPY  W+ SHR H
Sbjct: 93  AWPAYWAIQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLILHSALLVPYFSWKYSHRRH 152

Query: 206 HQNHGHVENDESWHPLPEKIF----RNLDN--ITRKLRFTVPFPMLAYPFYLWNRSPGKT 259
           H N G +E DE + P  +       + L N  + R L  T+    L +P YL     G+ 
Sbjct: 153 HSNTGSLERDEVFVPKQKSSIYWYSKYLSNNPLGRVLTITITL-TLGWPLYLALNVSGRP 211

Query: 260 ----GSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGF 315
                 HF+P   ++   ER  +  S     A+   L  L+   G   ++ +YG+P    
Sbjct: 212 YDRFACHFNPHGPIYSDRERLQIYVSDAGILAVCFGLYHLAMAKGLAWVVCVYGVPLLVV 271

Query: 316 VMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHL 374
             +L  +T+L H      LP Y  +EW +LRG L T+DRDYG +N + H+I  THV HHL
Sbjct: 272 NGFLVLITFLQH--THPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHL 329

Query: 375 FPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLIGSLVRSLRKDHYVS 426
           F  +PHYH +EAT+A KP+LG YYR  E     PF+   +L R  R+  YV 
Sbjct: 330 FSTMPHYHAMEATKAIKPILGDYYRLDET----PFY--QALWREARECIYVE 375


>IMGA|AC233577_39.1 Fatty acid desaturase AC233577.5 182710-180865 E
           EGN_Mt090430 20090702
          Length = 343

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 151/322 (46%), Gaps = 36/322 (11%)

Query: 93  PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXX------XX 146
           P   PPF +  ++ +IP HC+ +    S SYVV D                         
Sbjct: 5   PHTKPPFTVGQLKKSIPPHCFERSILLSFSYVVFDLSIAYVLYISTTYFHSFPHPFPFIL 64

Query: 147 XPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHH 206
            P+YW  Q T                       + +VG +LH+S+LVPY  W+ISHR HH
Sbjct: 65  WPVYWLLQVT-------------------TNGFDDLVGFILHTSLLVPYFSWKISHRRHH 105

Query: 207 QNHGHVENDESWHPLPEKIF----RNLDNITRKLRFTVPFPMLAYPFYL----WNRSPGK 258
            N   +E DE + P P+       + L+N   +    +    L +P YL    + R   +
Sbjct: 106 SNTASLERDEVFVPKPKSNVGWYSKYLNNPLGRALTLLITLTLGWPLYLAFNVFGRPYDR 165

Query: 259 TGSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMW 318
             SH+HP + ++   ER  V  S     A   LL  ++ + G + L+ +Y +P      +
Sbjct: 166 FASHYHPYAPIYSKRERLQVFVSIAAVLAATYLLYFIASLKGFVWLICVYFVPLLIVNGF 225

Query: 319 LDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYG-WINNIHHDIGTHVIHHLFPQ 377
           L  +TYL H      LP Y   EW +LRG L T+DRDYG  I   HH   THV HH+F  
Sbjct: 226 LVTITYLQHT--HFSLPHYDSKEWDWLRGALATVDRDYGILIKVFHHITDTHVAHHIFST 283

Query: 378 IPHYHLIEATEAAKPVLGKYYR 399
           +PHYH +EAT+A KP+LG+YY+
Sbjct: 284 MPHYHAMEATKAMKPILGEYYQ 305


>IMGA|Medtr8g145530.1 Fatty acid desaturase
           chr08_pseudomolecule_IMGAG_V3 35397649-35391594 E
           EGN_Mt090430 20090702
          Length = 446

 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 121/259 (46%), Gaps = 19/259 (7%)

Query: 148 PLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQ 207
           PL WA  GT     FV+GHDC H SFS N  +  +VG L    ++ PY  WR  H  HH 
Sbjct: 152 PLAWAWTGTAVTGFFVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHA 211

Query: 208 NHGHVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDS 267
               ++ D +W P+ +  F +   + + + +         PF  W        SHF  D 
Sbjct: 212 KTNMLKEDTAWQPVWQDEFESSPFLRKAIIYGYG------PFRCWMSIAHWLVSHF--DL 263

Query: 268 DLFLPNERKDVITSTICWTAMAA----LLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVT 323
             F PNE K V  S  C  A  A    L++  + +MG I   K + +P+ G+  W+   T
Sbjct: 264 KTFRPNEIKRVKISLACVFAFIAIGWPLIIYKTGIMGWI---KFWLMPWLGYHFWMSTFT 320

Query: 324 YLHHHGHEEKLPWYRGNEWSYLRGGLT-TLDRDY-GWINNIHHDIGTHVIHHLFPQIPHY 381
            +HH      +P+    EW+  +  L  T+   Y  WI  + HDI  H+ HH+ P+IP Y
Sbjct: 321 MVHHTA--PHIPFKNSEEWNAAQAQLNGTVHCAYPQWIEILCHDINVHIPHHISPKIPSY 378

Query: 382 HLIEATEAAKPVLGKYYRE 400
           +L  A ++ +   GKY  E
Sbjct: 379 NLRAAHKSIQENWGKYLNE 397