Jatropha Genome Database

JcCB0008441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008441.10 - phase: 0 
         (417 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g106000.1 Thiolase chr05_pseudomolecule_IMGAG_V3 4259...   676   0.0  
IMGA|Medtr5g106000.2 Thiolase; chr05_pseudomolecule_IMGAG_V3 425...   653   0.0  
IMGA|AC233669_10.1 Thiolase AC233669.2 43191-49625 E EGN_Mt09043...   640   0.0  
IMGA|AC233669_10.2 Thiolase AC233669.2 43191-45704 E EGN_Mt09043...   312   2e-85
IMGA|Medtr4g023640.1 Thiolase chr04_pseudomolecule_IMGAG_V3 5223...   208   4e-54

>IMGA|Medtr5g106000.1 Thiolase chr05_pseudomolecule_IMGAG_V3
           42593338-42586767 E EGN_Mt090430 20090702
          Length = 407

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/392 (84%), Positives = 360/392 (91%)

Query: 26  DVCIVGVARTPMGGFLGTLSSLPATKLGSIAIEAALKRAHVDPSLVQEVFFGNVLSANLG 85
           DVCIVGVARTPMG FLGTLSS+PATKLGSIAIEAALKRA+VDP++V+EVFFGNVLSANLG
Sbjct: 16  DVCIVGVARTPMGAFLGTLSSVPATKLGSIAIEAALKRANVDPAIVEEVFFGNVLSANLG 75

Query: 86  QAPARQAALGAGISNSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMESMSNTP 145
           QAPARQAALGAG+S SVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGME+MS+ P
Sbjct: 76  QAPARQAALGAGLSKSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMENMSSVP 135

Query: 146 KYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDVGMGSCAEICADNHSITREDQDNYAIQS 205
           KYLAEARKGSRLGHDSLVDGMLKDGLWDVY DVGMG CAE+CADNHSITREDQDNYA+QS
Sbjct: 136 KYLAEARKGSRLGHDSLVDGMLKDGLWDVYKDVGMGVCAELCADNHSITREDQDNYAVQS 195

Query: 206 FERGIAAQEGGAFAWEIVPVEVSGGRGKPSTIIDRDEGIGKFDPVKLRKLRPSFKQDGGT 265
           FERGI+AQE G F WEI PVEVSGGRG+PSTI+D+DEG+GKFD  KLRKLRPSFK+ GG+
Sbjct: 196 FERGISAQENGYFGWEITPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPSFKETGGS 255

Query: 266 VTAGNASSISDGAAALVLVSGETALKLGLQVIAKITGYADAAQAPELFTTAPALAIPKAL 325
           VTAGNASSISDGAAALVLVSGE ALKLGLQVIAKITGYADAAQ PELFTTAPA+AIPKA+
Sbjct: 256 VTAGNASSISDGAAALVLVSGEKALKLGLQVIAKITGYADAAQDPELFTTAPAIAIPKAI 315

Query: 326 SSAGLDASQVDYYEINEAFAVVALSNQKLLGLNPEKVNVHGGAVSLGHPLGCSGARILVT 385
           ++AGL+ S++D+YEINEAFAVVAL+NQKLLGL+  KVNVHGGAVSLGHPLGCSGARILVT
Sbjct: 316 ANAGLETSKIDFYEINEAFAVVALANQKLLGLDSAKVNVHGGAVSLGHPLGCSGARILVT 375

Query: 386 LLGVLRQRXXXXXXXXXXXXXXXASALVLELL 417
           LLGVL+Q+               ASALV+ELL
Sbjct: 376 LLGVLKQKNGKYGVGGVCNGGGGASALVVELL 407


>IMGA|Medtr5g106000.2 Thiolase; chr05_pseudomolecule_IMGAG_V3
           42594226-42586767 E EGN_Mt090430 20090702
          Length = 381

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/381 (83%), Positives = 349/381 (91%)

Query: 37  MGGFLGTLSSLPATKLGSIAIEAALKRAHVDPSLVQEVFFGNVLSANLGQAPARQAALGA 96
           MG FLGTLSS+PATKLGSIAIEAALKRA+VDP++V+EVFFGNVLSANLGQAPARQAALGA
Sbjct: 1   MGAFLGTLSSVPATKLGSIAIEAALKRANVDPAIVEEVFFGNVLSANLGQAPARQAALGA 60

Query: 97  GISNSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMESMSNTPKYLAEARKGSR 156
           G+S SVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGME+MS+ PKYLAEARKGSR
Sbjct: 61  GLSKSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMENMSSVPKYLAEARKGSR 120

Query: 157 LGHDSLVDGMLKDGLWDVYNDVGMGSCAEICADNHSITREDQDNYAIQSFERGIAAQEGG 216
           LGHDSLVDGMLKDGLWDVY DVGMG CAE+CADNHSITREDQDNYA+QSFERGI+AQE G
Sbjct: 121 LGHDSLVDGMLKDGLWDVYKDVGMGVCAELCADNHSITREDQDNYAVQSFERGISAQENG 180

Query: 217 AFAWEIVPVEVSGGRGKPSTIIDRDEGIGKFDPVKLRKLRPSFKQDGGTVTAGNASSISD 276
            F WEI PVEVSGGRG+PSTI+D+DEG+GKFD  KLRKLRPSFK+ GG+VTAGNASSISD
Sbjct: 181 YFGWEITPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPSFKETGGSVTAGNASSISD 240

Query: 277 GAAALVLVSGETALKLGLQVIAKITGYADAAQAPELFTTAPALAIPKALSSAGLDASQVD 336
           GAAALVLVSGE ALKLGLQVIAKITGYADAAQ PELFTTAPA+AIPKA+++AGL+ S++D
Sbjct: 241 GAAALVLVSGEKALKLGLQVIAKITGYADAAQDPELFTTAPAIAIPKAIANAGLETSKID 300

Query: 337 YYEINEAFAVVALSNQKLLGLNPEKVNVHGGAVSLGHPLGCSGARILVTLLGVLRQRXXX 396
           +YEINEAFAVVAL+NQKLLGL+  KVNVHGGAVSLGHPLGCSGARILVTLLGVL+Q+   
Sbjct: 301 FYEINEAFAVVALANQKLLGLDSAKVNVHGGAVSLGHPLGCSGARILVTLLGVLKQKNGK 360

Query: 397 XXXXXXXXXXXXASALVLELL 417
                       ASALV+ELL
Sbjct: 361 YGVGGVCNGGGGASALVVELL 381


>IMGA|AC233669_10.1 Thiolase AC233669.2 43191-49625 E EGN_Mt090430
           20090702
          Length = 408

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/394 (79%), Positives = 350/394 (88%)

Query: 24  SVDVCIVGVARTPMGGFLGTLSSLPATKLGSIAIEAALKRAHVDPSLVQEVFFGNVLSAN 83
           S DVCIVGV RTPMGGFLG+LSSL AT LGS+AI+AALKRA+VDPSLVQEVFFGNVLSAN
Sbjct: 5   SRDVCIVGVGRTPMGGFLGSLSSLSATHLGSLAIKAALKRANVDPSLVQEVFFGNVLSAN 64

Query: 84  LGQAPARQAALGAGISNSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMESMSN 143
           LGQAPARQAALGAGI  SV+CTT+NKVC+SGMKATMLAAQ+IQLG NDVVV GGMESMSN
Sbjct: 65  LGQAPARQAALGAGIPTSVICTTINKVCSSGMKATMLAAQTIQLGSNDVVVVGGMESMSN 124

Query: 144 TPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDVGMGSCAEICADNHSITREDQDNYAI 203
            PKY+AEARKGSRLGHD+++DGMLKDGLWDVYND GMG CAE+CAD H+ITR+ QD+YAI
Sbjct: 125 APKYIAEARKGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAEMCADQHAITRDQQDSYAI 184

Query: 204 QSFERGIAAQEGGAFAWEIVPVEVSGGRGKPSTIIDRDEGIGKFDPVKLRKLRPSFKQDG 263
           QSFERGI+AQ GG FAWEIVPVE+  GRGKPST++D+DEG+GKFD  KLRKL P+FK+ G
Sbjct: 185 QSFERGISAQNGGHFAWEIVPVEIFSGRGKPSTLVDKDEGLGKFDAAKLRKLGPNFKKVG 244

Query: 264 GTVTAGNASSISDGAAALVLVSGETALKLGLQVIAKITGYADAAQAPELFTTAPALAIPK 323
           GTVTAGNASSISDGAAALVLVS + A +LGL VIAKI G+ADAAQAPE FTTAPALAIPK
Sbjct: 245 GTVTAGNASSISDGAAALVLVSEKKAHELGLHVIAKIKGFADAAQAPEFFTTAPALAIPK 304

Query: 324 ALSSAGLDASQVDYYEINEAFAVVALSNQKLLGLNPEKVNVHGGAVSLGHPLGCSGARIL 383
           A+S+AGL+ASQ+DYYEINEAF+ VAL+NQKLLGL+PEK+NVHGGAVSLGHPLGCSGARIL
Sbjct: 305 AISNAGLEASQIDYYEINEAFSAVALANQKLLGLDPEKLNVHGGAVSLGHPLGCSGARIL 364

Query: 384 VTLLGVLRQRXXXXXXXXXXXXXXXASALVLELL 417
           VTLLGVLR +               ASALV+EL+
Sbjct: 365 VTLLGVLRHKGGKYGVGAICNGGGGASALVVELM 398


>IMGA|AC233669_10.2 Thiolase AC233669.2 43191-45704 E EGN_Mt090430
           20090702
          Length = 191

 Score =  312 bits (799), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/175 (84%), Positives = 162/175 (92%)

Query: 24  SVDVCIVGVARTPMGGFLGTLSSLPATKLGSIAIEAALKRAHVDPSLVQEVFFGNVLSAN 83
           S DVCIVGV RTPMGGFLG+LSSL AT LGS+AI+AALKRA+VDPSLVQEVFFGNVLSAN
Sbjct: 5   SRDVCIVGVGRTPMGGFLGSLSSLSATHLGSLAIKAALKRANVDPSLVQEVFFGNVLSAN 64

Query: 84  LGQAPARQAALGAGISNSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGMESMSN 143
           LGQAPARQAALGAGI  SV+CTT+NKVC+SGMKATMLAAQ+IQLG NDVVV GGMESMSN
Sbjct: 65  LGQAPARQAALGAGIPTSVICTTINKVCSSGMKATMLAAQTIQLGSNDVVVVGGMESMSN 124

Query: 144 TPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDVGMGSCAEICADNHSITREDQ 198
            PKY+AEARKGSRLGHD+++DGMLKDGLWDVYND GMG CAE+CAD H+ITR+ Q
Sbjct: 125 APKYIAEARKGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAEMCADQHAITRDQQ 179


>IMGA|Medtr4g023640.1 Thiolase chr04_pseudomolecule_IMGAG_V3
           5223767-5218589 F EGN_Mt090430 20090702
          Length = 435

 Score =  208 bits (530), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/379 (38%), Positives = 212/379 (55%), Gaps = 27/379 (7%)

Query: 26  DVCIVGVARTPM-----GGFLGTLSSLPATKLGSIAIEAALKRAHVDPSLVQEVFFGNVL 80
           DV IV   RT +     GGF  TL   P   L S+ ++A +++ +V+PS V ++  G VL
Sbjct: 45  DVVIVAAYRTAICKAKRGGFKDTL---PDDLLASV-LKAVIEKTNVEPSEVGDIVVGTVL 100

Query: 81  SANLGQA-PARQAALGAGISNSVVCTTVNKVCASGMKATMLAAQSIQLGINDVVVAGGME 139
                +A   R AA  AG  ++V   TVN+ C+SG++A    A  I+ G  D+ +  G+E
Sbjct: 101 GPGSERAIECRMAAFYAGFPDTVPLRTVNRQCSSGLQAVADVAAYIKAGFYDIGIGAGLE 160

Query: 140 SMSNTPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDVGMGSCAEICADNHSITREDQD 199
            M  T   ++  RK +       +    +D L      + MG  +E  A  + +TR++QD
Sbjct: 161 CM--TQDTISGVRKTN---PKVEIFAQARDCL------LSMGITSENVAQRYGVTRQEQD 209

Query: 200 NYAIQSFERGIAAQEGGAFAWEIVPVE---VSGGRGKPSTII-DRDEGIG-KFDPVKLRK 254
             A++S  R  AA   G F  EI+PV    V    G+   II   D+GI    + V L K
Sbjct: 210 QAAVESHRRAAAATASGKFKDEIIPVSTKFVDPKTGEEKQIIVSVDDGIRPNANLVDLAK 269

Query: 255 LRPSFKQDGGTVTAGNASSISDGAAALVLVSGETALKLGLQVIAKITGYADAAQAPELFT 314
           L+P+FK+DG T TAGNAS +SDGAAA++L+    A++ GL ++     ++     P +  
Sbjct: 270 LKPAFKKDG-TTTAGNASQVSDGAAAVLLMKRSVAVQKGLPILGIFRSFSAVGVDPAVMG 328

Query: 315 TAPALAIPKALSSAGLDASQVDYYEINEAFAVVALSNQKLLGLNPEKVNVHGGAVSLGHP 374
             PA AIP A+ SAGL+ S +D YEINEAFA   + + K LGL+P KVNV+GGA++ GHP
Sbjct: 329 VGPAFAIPAAVKSAGLELSNIDLYEINEAFASQFVYSCKKLGLDPTKVNVNGGAMAFGHP 388

Query: 375 LGCSGARILVTLLGVLRQR 393
           LG +GAR + TLL  +++R
Sbjct: 389 LGATGARCVATLLNEMKRR 407