Jatropha Genome Database

JcCB0005331.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0005331.30 - phase: 0 
         (689 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g129690.1 hypothetical protein chr01_pseudomolecule_I...   748   0.0  
IMGA|Medtr3g150560.1 hypothetical protein chr03_pseudomolecule_I...    80   3e-15
IMGA|Medtr8g109810.1 hypothetical protein chr08_pseudomolecule_I...    72   1e-12
IMGA|Medtr2g052720.1 hypothetical protein chr02_pseudomolecule_I...    59   8e-09

>IMGA|Medtr1g129690.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 29012222-29014297 E
           EGN_Mt090430 20090702
          Length = 643

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/684 (56%), Positives = 461/684 (67%), Gaps = 63/684 (9%)

Query: 16  GCCPTPLFGYPVSQEKIGQT---RSTASTCRRNFAATAASSIFPNTQFTNPESLPSLQES 72
           GCCPT LF     Q     T   R+++S CR+ FA+T+ SSIFPNT+FTN ESLPSL ES
Sbjct: 13  GCCPTLLFIKSSQQSHNNSTTKPRNSSSHCRQTFASTS-SSIFPNTKFTNHESLPSLHES 71

Query: 73  FAEFTKAYPQYSGTYQVDQIRAQEYYQLSHSHHTCLDYIGIGLFSYSQLQKHDSRK--LV 130
           F EF K YPQ+S T ++D +RA+EYY LS  + +CLDYIGIGLFSY Q Q+HD+ K    
Sbjct: 72  FTEFIKVYPQFSETEKIDSLRAKEYYHLSFLNQSCLDYIGIGLFSYYQRQQHDASKTQFS 131

Query: 131 XXXXXXXXXXPQ-ISHFPFFSVSYKTGNLKTQLLHGGQESELESAIKNRIMRFLNISEKD 189
                     PQ  S  PFFS+SYKTGNLKT LLHGG+ESE ESA++ RIM+FLNISE D
Sbjct: 132 SPSTSTPFQSPQQYSDIPFFSISYKTGNLKTLLLHGGKESEFESAMRKRIMKFLNISEND 191

Query: 190 YCMVFTANRTSAFKLVAESYPFSSSQKLLTVYDYESEAVETMINCSEKKGAKIMSAEFSW 249
           Y MVFTANRTSAFKLVA+SYPF S +KLLTVYDYESEAVE MI+ SE +GAK MSAEFSW
Sbjct: 192 YFMVFTANRTSAFKLVADSYPFQSCKKLLTVYDYESEAVEAMISTSENRGAKSMSAEFSW 251

Query: 250 PRLRIHSAXXXXXXXXXXX---XXXXXGLFVFPLHSRVTGARYPYLWMSVAQENDWHILI 306
           PRLRI S                    GLFVFPLHSRVTGARYPYLWM  AQEN WH+LI
Sbjct: 252 PRLRIQSTKLKKMIVSDNSKKKIKKKNGLFVFPLHSRVTGARYPYLWMRTAQENGWHVLI 311

Query: 307 DACALGPKDMDSFGLSLIRPDFLILSFYKIFGENPSGFGCLFVKKSTVPHMEDSNSTGMI 366
           DACALGPKDMDSFGLSL +PDFLI SFYK+FGENPSGFGCLFVKKS++  +E S   G++
Sbjct: 312 DACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSSISILESSTCAGIV 371

Query: 367 RLIPANKLFWFLDESS-GTDVELEQTTKFVLEGDELDTSNSFSGPIAIPKMHHEELEQGX 425
            L+P +  F   ++SS    V + Q +  +L+  EL   +SFSG +  P+          
Sbjct: 372 NLVPESTQFNLSEDSSCNNQVGIGQKSPSILQEQELSALSSFSGRMQTPQF--------- 422

Query: 426 XXXXXXXXXXXXXXVSENSKSETARTTTEQEVSETATSELQTTGTFTIQKEAETSEIMEP 485
                         V  + K+     T E  V E                          
Sbjct: 423 ------------VKVEADPKAPLGSETMEARVVENN------------------------ 446

Query: 486 GKPAEVLQQETAKASRNGIMEIECRGLDQVDLLGLTQISNRARCLINWLVNALMKLKHPN 545
                  Q +T + S+N    IECR LDQVD LGLT I+NR R LINWLVN+L+KLKHPN
Sbjct: 447 -------QVKTVQDSKNESFNIECRCLDQVDSLGLTLITNRGRYLINWLVNSLLKLKHPN 499

Query: 546 TEEIPVIRIYGPKIKFDRGPALAFNVFDWKGEKIEAPLIQKLADRSNISLSCGFLHHISF 605
            E +P+++IYGPKI+FDRGPALAFNV+DWKGEK+E  L+QKLADR+NISLS GFLHHI F
Sbjct: 500 DEGVPLVKIYGPKIRFDRGPALAFNVYDWKGEKVEPVLVQKLADRNNISLSYGFLHHIWF 559

Query: 606 SDKFEEDKATVLERKASSVKGKLTNKREEKSNLGITVATVALGFLANFEDTYRLWAFIAQ 665
           +DK+ E K  VL+ K    +  + NK++++ +LG+TV T AL FLANFED Y+LW F+A+
Sbjct: 560 ADKYSEGKGRVLQTKEGRGEKVMVNKKKDRDDLGVTVVTAALSFLANFEDVYKLWTFVAR 619

Query: 666 FLDADFVEKAKWRYTALNQKTIEV 689
           FLDADFVEK +WRYTALNQKTIEV
Sbjct: 620 FLDADFVEKERWRYTALNQKTIEV 643


>IMGA|Medtr3g150560.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 39705178-39707244 E
           EGN_Mt090430 20090702
          Length = 369

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 19/185 (10%)

Query: 176 KNRIMRFLNISEKDYCMVFTANRTSAFKLVAESYPFSSSQKLLTVYDYESEAVETMINCS 235
           +N++++   +++ +Y ++FT +   A  LV ESYPF      +T+ D E + ++      
Sbjct: 185 QNKVLKHYGLTDDEYLVLFTPSYKDAMMLVGESYPFIKGNYYMTILDQEEDFIKEFACFK 244

Query: 236 EKKGAKIMSAEFSWPRLRIHSAXXXXXXXXXXXXXXXXGLFVFPLHSRVTGARYPYLWMS 295
           E   +K++ A  +W  LRI  +                GLF +P  +  +G  +   W+S
Sbjct: 245 E---SKVIPAPKTWLDLRIKGS-QLSQNFRRRCKISPKGLFSYP--ADASGTMH---WIS 295

Query: 296 VAQENDWHILIDACA--LGPKDMDSFGLSLIRPDFLILSF-----YKIFGENPSGFGCLF 348
            A  N+WH+L+DA A  +G    D   L+L RPDF+I S            NPS   CL 
Sbjct: 296 EAHRNNWHVLLDASAYVVG---KDRLHLALHRPDFVICSLDNNTHSSNTNSNPSRITCLL 352

Query: 349 VKKST 353
           V+K +
Sbjct: 353 VRKES 357


>IMGA|Medtr8g109810.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 24714224-24715913 E
           EGN_Mt090430 20090702
          Length = 359

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 12/182 (6%)

Query: 172 ESAIKNRIMRFLNISEKDYCMVFTANRTSAFKLVAESYPFSSSQKLLTVYDYESEAVETM 231
           E   +N++++   + + +Y ++FT +      LV ESYPF      +T+   + + ++  
Sbjct: 172 EIQAQNKVLKHCGLPDAEYLVLFTPSYKDTMMLVGESYPFVKGNYCMTILGEQEDYIKEF 231

Query: 232 INCSEKKGAKIMSAEFSWPRLRIHSAXXXXXXXXXXXXXXXXGLFVFPLHSRVTGARYPY 291
              +  K +K++ A  +W  LRI  +                GLF +   + V G  +  
Sbjct: 232 ---AFYKKSKVIPAPKTWLDLRIRGS--QLSQNFRRCKISPKGLFAY--EADVNGKMH-- 282

Query: 292 LWMSVAQENDWHILIDACALGPKDMDSFGLSLIRPDFLILSFYKIFGENPSGFGCLFVKK 351
            W+S A+ N WH+L+DA A+     D   + L RPDFL+         NPS   CL ++K
Sbjct: 283 -WISEARRNYWHVLLDASAMV-VGKDRLHVGLHRPDFLVCCLDNT-NSNPSRITCLLIRK 339

Query: 352 ST 353
            +
Sbjct: 340 KS 341


>IMGA|Medtr2g052720.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 14333998-14336069 E
           EGN_Mt090430 20090702
          Length = 353

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 35/185 (18%)

Query: 176 KNRIMRFLNISEKDYCMVFTANRTSAFKLVAESYPFSSSQKLLTVYDYESEAVETMINCS 235
           +N++++   +++ +Y ++FT +   A  LV E   F                      C 
Sbjct: 185 QNKVLKHYGLTDDEYLVLFTPSYKDAMMLVGEKEDFIKE-----------------FGCF 227

Query: 236 EKKGAKIMSAEFSWPRLRIHSAXXXXXXXXXXXXXXXXGLFVFPLHSRVTGARYPYLWMS 295
             K +K++ A  +W  LRI  +                GLF +P  +  +G  +   W+S
Sbjct: 228 --KESKVIPAPKTWLDLRIKGSQLSQNFRRRCKISPK-GLFSYP--ADASGTMH---WIS 279

Query: 296 VAQENDWHILIDACA--LGPKDMDSFGLSLIRPDFLILSF-----YKIFGENPSGFGCLF 348
            A  N+WH+L+DA A  +G    D   L+L RPDF+I S            NPS   CL 
Sbjct: 280 EAHRNNWHVLLDASAYVVG---KDRLHLALHRPDFVICSLDNNTHSSNTNSNPSRITCLL 336

Query: 349 VKKST 353
           V+K +
Sbjct: 337 VRKES 341