Jatropha Genome Database

JcCB0005331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0005331.10 - phase: 0 
         (368 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g129720.1 TCP transcription factor chr01_pseudomolecu...   253   1e-67
IMGA|Medtr2g006520.1 TCP transcription factor chr02_pseudomolecu...   134   5e-32
IMGA|Medtr2g005910.1 TCP transcription factor chr02_pseudomolecu...   134   5e-32
IMGA|Medtr7g018180.1 TCP transcription factor chr07_pseudomolecu...   133   2e-31
IMGA|Medtr5g040550.1 TCP transcription factor chr05_pseudomolecu...   129   3e-30
IMGA|Medtr8g112560.1 TCP transcription factor chr08_pseudomolecu...   127   8e-30
IMGA|Medtr8g112220.1 TCP transcription factor chr08_pseudomolecu...   127   8e-30
IMGA|Medtr1g076470.1 TCP transcription factor chr01_pseudomolecu...   121   6e-28
IMGA|Medtr1g143870.1 TCP transcription factor chr01_pseudomolecu...   120   1e-27
IMGA|Medtr1g143660.1 TCP transcription factor chr01_pseudomolecu...   120   1e-27
IMGA|Medtr1g046410.1 TCP transcription factor chr01_pseudomolecu...   119   2e-27

>IMGA|Medtr1g129720.1 TCP transcription factor
           chr01_pseudomolecule_IMGAG_V3 29020377-29021876 E
           EGN_Mt090430 20090702
          Length = 367

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/221 (65%), Positives = 164/221 (74%), Gaps = 22/221 (9%)

Query: 74  SLLQVPKSSNTRALVTAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGET 133
           SL+ VP  + T A   AKR SKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGET
Sbjct: 76  SLIPVPVQTMTVA--AAKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGET 133

Query: 134 IRWLLEHAEPAIIEATGTGTVPAIAVSINGTLKIPTTSPARPDGDELLPKKRRKRPSNSD 193
           IRWLLE AEP+IIEATGTGTVPAIAVS+ GTLKIPT+SPARPDG++  P KRR+R SNS+
Sbjct: 134 IRWLLEQAEPSIIEATGTGTVPAIAVSVGGTLKIPTSSPARPDGED-APVKRRRRASNSE 192

Query: 194 FIDVNEQQTSVSSGLAPISPTA----AATLPNYGGGSTQGLVPFWPMGT----------- 238
           F+D+N+ Q S+ SGLAPI+ TA    A +     G +  GLVP WP+ +           
Sbjct: 193 FVDLND-QVSMCSGLAPIAQTAYGAAATSSGGGSGENGGGLVPLWPVVSNGVGSNTTGPF 251

Query: 239 FMLPQSGSGSNQSQLWAIPAAATPFFNVAARPISSFVSAMQ 279
           FM P S +  NQ Q WAIPAA  PFFNV  RPIS FVSAMQ
Sbjct: 252 FMFPNS-TLMNQPQFWAIPAA--PFFNVQTRPISDFVSAMQ 289


>IMGA|Medtr2g006520.1 TCP transcription factor
           chr02_pseudomolecule_IMGAG_V3 680418-682650 E
           EGN_Mt090430 20090702
          Length = 487

 Score =  134 bits (338), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 78/99 (78%), Gaps = 5/99 (5%)

Query: 73  ISLLQVPKSSNTRALVTA-----KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGH 127
           +S  Q+   S+T   VTA     KR +KDRHTKV+GRGRRIRMPATCAAR+FQLTRELGH
Sbjct: 104 VSNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGH 163

Query: 128 KSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSINGTLK 166
           KSDGETI WLL+ AEPAII ATGTGT+PA   ++N +L+
Sbjct: 164 KSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLR 202


>IMGA|Medtr2g005910.1 TCP transcription factor
           chr02_pseudomolecule_IMGAG_V3 468226-465994 E
           EGN_Mt090430 20090702
          Length = 487

 Score =  134 bits (338), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 78/99 (78%), Gaps = 5/99 (5%)

Query: 73  ISLLQVPKSSNTRALVTA-----KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGH 127
           +S  Q+   S+T   VTA     KR +KDRHTKV+GRGRRIRMPATCAAR+FQLTRELGH
Sbjct: 104 VSNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGH 163

Query: 128 KSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSINGTLK 166
           KSDGETI WLL+ AEPAII ATGTGT+PA   ++N +L+
Sbjct: 164 KSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLR 202


>IMGA|Medtr7g018180.1 TCP transcription factor
           chr07_pseudomolecule_IMGAG_V3 4438218-4437149 E
           EGN_Mt090430 20090702
          Length = 284

 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 80/113 (70%), Gaps = 1/113 (0%)

Query: 60  LGDXXXXXXXSLPISLLQVPKSSNTRALVTAKRPS-KDRHTKVEGRGRRIRMPATCAARI 118
           +G+       +L I L +      T+  +  KR S KDRHTKVEGRGRRIRMPA CAARI
Sbjct: 15  MGENKESETKNLQIVLSETTTKDETKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARI 74

Query: 119 FQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSINGTLKIPTTS 171
           FQLTRELGHKSDGETI+WLL+ +EP+II ATGTGT+PA A++ +G    P  S
Sbjct: 75  FQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALASSGNTLTPQGS 127


>IMGA|Medtr5g040550.1 TCP transcription factor
           chr05_pseudomolecule_IMGAG_V3 17311282-17309549 E
           EGN_Mt090430 20090702
          Length = 416

 Score =  129 bits (323), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 67/77 (87%), Gaps = 1/77 (1%)

Query: 91  KRPS-KDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEAT 149
           KR S KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI WLL+ AEPA+I AT
Sbjct: 63  KRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAAT 122

Query: 150 GTGTVPAIAVSINGTLK 166
           GTGT+PA   S+N +L+
Sbjct: 123 GTGTIPANFTSLNISLR 139


>IMGA|Medtr8g112560.1 TCP transcription factor
           chr08_pseudomolecule_IMGAG_V3 25298484-25296792 E
           EGN_Mt090430 20090702
          Length = 437

 Score =  127 bits (319), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 6/91 (6%)

Query: 78  VPKSSNTRALVTAKRP------SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 131
           VP S+ T +    K+P      +KDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDG
Sbjct: 75  VPASTPTTSDPANKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDG 134

Query: 132 ETIRWLLEHAEPAIIEATGTGTVPAIAVSIN 162
           ETI WLL+ AEPA+I ATGTGT+PA   S+N
Sbjct: 135 ETIEWLLQQAEPAVIAATGTGTIPANFTSLN 165


>IMGA|Medtr8g112220.1 TCP transcription factor
           chr08_pseudomolecule_IMGAG_V3 25134377-25132685 E
           EGN_Mt090430 20090702
          Length = 437

 Score =  127 bits (319), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 6/91 (6%)

Query: 78  VPKSSNTRALVTAKRP------SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 131
           VP S+ T +    K+P      +KDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDG
Sbjct: 75  VPASTPTTSDPANKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDG 134

Query: 132 ETIRWLLEHAEPAIIEATGTGTVPAIAVSIN 162
           ETI WLL+ AEPA+I ATGTGT+PA   S+N
Sbjct: 135 ETIEWLLQQAEPAVIAATGTGTIPANFTSLN 165


>IMGA|Medtr1g076470.1 TCP transcription factor
           chr01_pseudomolecule_IMGAG_V3 15249568-15250185 E
           EGN_Mt090430 20090702
          Length = 205

 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 63/76 (82%), Gaps = 2/76 (2%)

Query: 83  NTRALVT--AKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEH 140
           NT+  V   A R +KDRHTKV GRGRR+RMP  CAARIFQLTRELGH+SDGETI WLL H
Sbjct: 36  NTKLTVRRPASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRH 95

Query: 141 AEPAIIEATGTGTVPA 156
           AEP+II ATGTGTVPA
Sbjct: 96  AEPSIIAATGTGTVPA 111


>IMGA|Medtr1g143870.1 TCP transcription factor
           chr01_pseudomolecule_IMGAG_V3 31897379-31899293 E
           EGN_Mt090430 20090702
          Length = 257

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/84 (66%), Positives = 67/84 (79%)

Query: 83  NTRALVTAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAE 142
           N + L   K P+KDRH+KV+GRGRRIRMP  CAAR+FQLTRELGHKSDG+TI WLL  AE
Sbjct: 22  NRQQLAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 81

Query: 143 PAIIEATGTGTVPAIAVSINGTLK 166
           P+II ATGTGT PA   S++ +L+
Sbjct: 82  PSIIAATGTGTTPASFSSLSVSLR 105


>IMGA|Medtr1g143660.1 TCP transcription factor
           chr01_pseudomolecule_IMGAG_V3 31773953-31775867 E
           EGN_Mt090430 20090702
          Length = 257

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/84 (66%), Positives = 67/84 (79%)

Query: 83  NTRALVTAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAE 142
           N + L   K P+KDRH+KV+GRGRRIRMP  CAAR+FQLTRELGHKSDG+TI WLL  AE
Sbjct: 22  NRQQLAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 81

Query: 143 PAIIEATGTGTVPAIAVSINGTLK 166
           P+II ATGTGT PA   S++ +L+
Sbjct: 82  PSIIAATGTGTTPASFSSLSVSLR 105


>IMGA|Medtr1g046410.1 TCP transcription factor
           chr01_pseudomolecule_IMGAG_V3 10803933-10802210 E
           EGN_Mt090430 20090702
          Length = 235

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 64/81 (79%), Gaps = 2/81 (2%)

Query: 76  LQVPKSSNTRALVTAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIR 135
           L  P S N  A+   K PSKDRH+KV+GRGRRIRMP  CAAR+FQLTRELGHKSDG+TI 
Sbjct: 16  LVEPTSQN--AITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIE 73

Query: 136 WLLEHAEPAIIEATGTGTVPA 156
           WLL  AEP+II ATGTGT PA
Sbjct: 74  WLLRQAEPSIIAATGTGTTPA 94