Jatropha Genome Database
- JcCB0005311.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0005311.20 - phase: 0 /partial
(261 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g037340.1 IQ calmodulin-binding region; HECT chr02_ps... 179 2e-45
IMGA|Medtr5g075640.1 HECT; Ubiquitin interacting motif; UBA-like... 129 2e-30
IMGA|Medtr2g029860.1 HECT; Ubiquitin chr02_pseudomolecule_IMGAG_... 96 2e-20
IMGA|Medtr2g029890.1 HECT chr02_pseudomolecule_IMGAG_V3 8104649-... 95 3e-20
IMGA|Medtr2g029850.1 HECT; Ubiquitin chr02_pseudomolecule_IMGAG_... 91 8e-19
IMGA|Medtr8g147800.1 HECT; Ubiquitin chr08_pseudomolecule_IMGAG_... 89 2e-18
IMGA|Medtr2g029910.1 HECT; Ubiquitin chr02_pseudomolecule_IMGAG_... 84 8e-17
IMGA|Medtr4g098630.1 HECT; Armadillo-like helical chr04_pseudomo... 65 4e-11
>IMGA|Medtr2g037340.1 IQ calmodulin-binding region; HECT
chr02_pseudomolecule_IMGAG_V3 10124038-10100639 E
EGN_Mt090430 20090702
Length = 1024
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 138/260 (53%), Gaps = 47/260 (18%)
Query: 2 YDGDFKDLSLDFTVTEESFGKRHVFELKPGGKDVCVTNENKMQYVHAMADYKLNRQILPF 61
Y+GD DL L F + +G++ EL PGGK++ VTNEN + ++H +A+++LN QI
Sbjct: 812 YEGDISDLELYFVILNNEYGEQTEEELLPGGKNLRVTNENVITFIHLVANHRLNSQIRQQ 871
Query: 62 SNAFYRGLTDVISPSWLKLFNAMEFNQLLSGGDFDIDVDDLRNNTRYTGGYSEGSRTIKL 121
S+ F RG +I W+ +FN E L+SG +DVDDLR +T Y G Y I++
Sbjct: 872 SSHFLRGFQQLIQKDWIDMFNEHELQLLISGSLDSLDVDDLREHTNYAGTYHSEHDVIEM 931
Query: 122 FWEVIRGFQPNERCLLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDASLWATIGGQDVDR 181
FWEV++GF + LKFVT CSR PLLGF++L+P F I + +A+ A +DR
Sbjct: 932 FWEVLKGFSMENKKKFLKFVTGCSRGPLLGFRYLEPLFCIQRAGGNATEDA------LDR 985
Query: 182 LPSASTCYNTLKVFLMQGTMTPRIFSLRFQSILFIFHLTLDVPVLYSCLGWLQLPTYKRA 241
LP+A+TC N LK LP Y+
Sbjct: 986 LPTAATCMNLLK-----------------------------------------LPPYRSK 1004
Query: 242 STLRAKLLYAISSNTGFELS 261
+ +KLLYAI+S+ GF+LS
Sbjct: 1005 DQMESKLLYAINSDAGFDLS 1024
>IMGA|Medtr5g075640.1 HECT; Ubiquitin interacting motif; UBA-like;
DUF913, E3 ubiquitin ligase TOM1;
chr05_pseudomolecule_IMGAG_V3 27600476-27583196 E
EGN_Mt090430 20090702
Length = 3641
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 106/198 (53%), Gaps = 23/198 (11%)
Query: 5 DFKDLSLDFTVTEES---FGKRHV--FELKPGGKDVCVTNENKMQYVHAMADYKLNRQIL 59
D DL+ EE + + V +EL PGG+++ VT ENK QYV +A+++L I
Sbjct: 3428 DVLDLTFSIDADEEKLILYERTEVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIR 3487
Query: 60 PFSNAFYRGLTDVISPSWLKLFNAMEFNQLLSGGDFDIDVDDLRNNTRYTGGYSEGSRTI 119
P NAF G +++I + +FN E L+SG DID+DDLR NT Y+ GYS S I
Sbjct: 3488 PQINAFLEGFSELIPRELISIFNDKELELLISGLP-DIDLDDLRANTEYS-GYSAASPVI 3545
Query: 120 KLFWEVIRGFQPNERCLLLKFVTSCSRAPLLGFKHLQ-----PSFTIHKVACDASLWATI 174
+ FWEV++G ++ LL+FVT S+ PL GF LQ F IHK
Sbjct: 3546 QWFWEVVQGLSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSP------ 3599
Query: 175 GGQDVDRLPSASTCYNTL 192
D LPSA TC+N L
Sbjct: 3600 -----DHLPSAHTCFNQL 3612
>IMGA|Medtr2g029860.1 HECT; Ubiquitin chr02_pseudomolecule_IMGAG_V3
8044224-8039845 H EGN_Mt090430 20090702
Length = 815
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 18/196 (9%)
Query: 3 DGDFKD---LSLDFTVTEESFGKRHVFELKPGGKDVCVTNENKMQYVHAMADYKLNRQIL 59
+ D+ D L L F++ E G R V EL PGG+ + V ++N+ +YVH + + I
Sbjct: 602 EADYIDSDALGLTFSIEVEELGHREVIELCPGGESLVVDSKNREKYVHLLIQSRFVTSIS 661
Query: 60 PFSNAFYRGLTDVISPSWLKLFNAM---EFNQLLSGGDFDIDVDDLRNNTRYTGGYSEGS 116
+ F +G D+IS S L+ F + +F+ +L G + DI V+D + +T+Y GY E
Sbjct: 662 EQISHFAQGFADIISCSSLEFFQFLHHEDFDWMLHGSENDISVEDWKAHTKY-HGYKEND 720
Query: 117 RTIKLFWEVIRGFQPNERCLLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDASLWATIGG 176
R I FW+++ ++ +LL F TS P+ GF L I K
Sbjct: 721 RQISWFWKIVGRMPAEQKKVLLFFWTSVKHLPVEGFHGLNSRLLICK-----------SH 769
Query: 177 QDVDRLPSASTCYNTL 192
+ + LPS+ TC+ L
Sbjct: 770 EPDNHLPSSHTCFYKL 785
>IMGA|Medtr2g029890.1 HECT chr02_pseudomolecule_IMGAG_V3
8104649-8109950 E EGN_Mt090430 20090702
Length = 783
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 18/196 (9%)
Query: 3 DGDFKD---LSLDFTVTEESFGKRHVFELKPGGKDVCVTNENKMQYVHAMADYKLNRQIL 59
D D+ D L L F++ E G R V +L PGG+ + V ++N+ +YVH + + I
Sbjct: 570 DADYIDSDALGLTFSIEVEELGHREVIKLCPGGESLVVDSKNREKYVHLLIQNRFVTSIS 629
Query: 60 PFSNAFYRGLTDVISPSWLKLFNAM---EFNQLLSGGDFDIDVDDLRNNTRYTGGYSEGS 116
+ F +G D+IS S L+ F + +F+ L G + DI+V+D + +T+Y GY +
Sbjct: 630 KQVSHFAQGFADIISCSRLEFFQFLDHEDFDWKLHGSENDINVEDWKAHTKYL-GYKKND 688
Query: 117 RTIKLFWEVIRGFQPNERCLLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDASLWATIGG 176
R I FW+++ ++ +LL F TS P+ GF L + I K
Sbjct: 689 RQISWFWKIVGKMSAEQKKVLLFFWTSVKHLPVEGFHGLSSTLLISK-----------SR 737
Query: 177 QDVDRLPSASTCYNTL 192
+ + LPS+ TC+ L
Sbjct: 738 EPGNHLPSSHTCFYKL 753
>IMGA|Medtr2g029850.1 HECT; Ubiquitin chr02_pseudomolecule_IMGAG_V3
8031721-8028260 H EGN_Mt090430 20090702
Length = 826
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 3 DGDFKD---LSLDFTVTEESFGKRHVFELKPGGKDVCVTNENKMQYVHAMADYKLNRQIL 59
D D+ D L L F+ E G R + EL PGG+ + V ++N+ +YVH + + I
Sbjct: 613 DADYIDSDALGLTFSTEVEELGHRELIELCPGGESLVVDSKNREKYVHLLIQNRFVTSIS 672
Query: 60 PFSNAFYRGLTDVISPSWLKLFNAM---EFNQLLSGGDFDIDVDDLRNNTRYTGGYSEGS 116
+ F G D++S S L+ F + +F+ +L G + I V+D + +T+Y GY E
Sbjct: 673 KQVSHFAEGFADILSCSRLEFFQFLDLEDFDLMLHGSENAISVEDWKVHTKYH-GYKEND 731
Query: 117 RTIKLFWEVIRGFQPNERCLLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDASLWATIGG 176
I FW+++ ++ +LL F TS P+ GF+ L + I K
Sbjct: 732 HQISWFWKIVGRMSAEQKKVLLFFWTSVKHLPVEGFRGLSSTLLISK-----------SS 780
Query: 177 QDVDRLPSASTCYNTL 192
+ + LPS+ TC+ L
Sbjct: 781 KPDNHLPSSHTCFYKL 796
>IMGA|Medtr8g147800.1 HECT; Ubiquitin chr08_pseudomolecule_IMGAG_V3
36472076-36466008 E EGN_Mt090430 20090702
Length = 881
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 3 DGDFKD---LSLDFTVTEESFGKRHVFELKPGGKDVCVTNENKMQYVHAMADYKLNRQIL 59
D DF D L L F E G+R +L PGGK++ V ++N+++YV + + I
Sbjct: 666 DSDFIDSDALGLTFIREVEELGQRKAIQLCPGGKNIVVNSKNRVKYVDLLIKDRFVTSIA 725
Query: 60 PFSNAFYRGLTDVISPSWLKLF-----NAMEFNQLLSGGDFDIDVDDLRNNTRYTGGYSE 114
+ F +G +++S S L+ F + + + +L G + I V+D + +T Y GY++
Sbjct: 726 EQVSHFAKGFAEILSSSKLQQFFFQSLESEDLDWMLRGSEDAISVEDWKAHTEY-NGYTD 784
Query: 115 GSRTIKLFWEVIRGFQPNERCLLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDASLWATI 174
I FWE++ E+ +LL F TS P+ GF+ L I+K
Sbjct: 785 TDIQISWFWEIVGRMTAEEKKVLLFFWTSVKYLPVEGFRGLGSRLHIYK----------- 833
Query: 175 GGQDVDRLPSASTCYNTL 192
+ DRLPS+ TC+ L
Sbjct: 834 SHESGDRLPSSHTCFYRL 851
>IMGA|Medtr2g029910.1 HECT; Ubiquitin chr02_pseudomolecule_IMGAG_V3
8114554-8118844 H EGN_Mt090430 20090702
Length = 801
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 11 LDFTVTEESFGKRHVFELKPGGKDVCVTNENKMQYVHAMADYKLNRQILPFSNAFYRGLT 70
L F++ E G R V EL GG+ + V ++N+ +YV + + + I + F G
Sbjct: 599 LTFSIEVEELGHRKVIELCSGGESIVVNSKNREKYVDLLIQNRFVKSISEQVSHFAEGFA 658
Query: 71 DVISPSWLKLFNAMEFNQL---LSGGDFDIDVDDLRNNTRYTGGYSEGSRTIKLFWEVIR 127
D+IS S L+ F ++ L L G + I V+D + +T+Y GY + I FW+++
Sbjct: 659 DIISGSRLEFFQFLDLEDLDWMLHGSENAISVEDWKAHTKYR-GYKKNDCQISWFWKIVG 717
Query: 128 GFQPNERCLLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDASLWATIGGQDVDRLPSAST 187
+R +LL F TS P+ GF L D+ L+ + + LPS+ T
Sbjct: 718 RMSAEQRKVLLFFWTSVKHLPVKGFHGL-----------DSCLFICKSSEPNNHLPSSHT 766
Query: 188 CYNTL 192
C+ L
Sbjct: 767 CFYEL 771
>IMGA|Medtr4g098630.1 HECT; Armadillo-like helical
chr04_pseudomolecule_IMGAG_V3 21322304-21312280 E
EGN_Mt090430 20090702
Length = 1881
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 97/268 (36%), Gaps = 55/268 (20%)
Query: 1 HYDG-DFKDLSLDFTVTEESFGKRHVFELKPGGKDVCVTNENKMQYVHAMADYKLNRQIL 59
HY G DL LDFT+ + LKPG D V N Y+ + D + I
Sbjct: 1662 HYRGAPIADLCLDFTLP-----GYPEYTLKPG--DEIVDLNNLEDYISMVVDATVKTGIT 1714
Query: 60 PFSNAFYRGLTDVISPSWLKLFNAMEFNQLLSGGDFDIDVDDLRNNTRYTGGYSEGSRTI 119
AF G V S L++F E + LL G + L ++ ++ GY+ S I
Sbjct: 1715 RQLEAFRAGFNQVFDISSLQIFTPHELDYLLCGRRELWKTETLADHIKFDHGYTAKSPAI 1774
Query: 120 KLFWEVIRGFQPNERCLLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDASLWATIGGQDV 179
E++ F P ++ +FVT + P G L P TI + + T G
Sbjct: 1775 VNLLEIMGEFTPEQQRAFCQFVTGAPKLPPGGLAVLNPKLTIVRKLSSTAANTTSNGNGP 1834
Query: 180 -----DRLPSASTCYNTLKVFLMQGTMTPRIFSLRFQSILFIFHLTLDVPVLYSCLGWLQ 234
D LPS TC N +L+
Sbjct: 1835 SETADDDLPSVMTCAN-----------------------------------------YLK 1853
Query: 235 LPTYKRASTLRAKLLYAISSNTG-FELS 261
LP Y + KL+YAI+ G F+LS
Sbjct: 1854 LPPYSTKEIMHKKLMYAINEGQGSFDLS 1881