Jatropha Genome Database

JcCB0004861.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004861.20 - phase: 0 
         (356 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g135710.1 Acetylglutamate kinase chr03_pseudomolecule...   421   e-118

>IMGA|Medtr3g135710.1 Acetylglutamate kinase
           chr03_pseudomolecule_IMGAG_V3 34039465-34040834 E
           EGN_Mt090430 20090702
          Length = 340

 Score =  421 bits (1083), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/294 (71%), Positives = 243/294 (82%), Gaps = 1/294 (0%)

Query: 64  TATSASP-PDSPDRFRVDILSESLPYIQKFRGKTIVVKYGGAAMKVPELKAXXXXXXXXX 122
           +A++ASP P SP +FRVDILSESLP+IQKFRGKTIVVKYGGAAMK PEL+A         
Sbjct: 47  SASAASPEPASPGQFRVDILSESLPFIQKFRGKTIVVKYGGAAMKSPELQASVINDLVLL 106

Query: 123 XCVGLRPVLVHGGGPEINHWLKLLNIEPLFHEGLRVTDAKTMEIVSMVLVGKVNKDLVSL 182
            CVGLRPV+VHGGGPEINHWL  LNI+P+F +GLRVTDA+TMEIVSMVLVGKVNK LVSL
Sbjct: 107 WCVGLRPVMVHGGGPEINHWLGRLNIQPVFRDGLRVTDAETMEIVSMVLVGKVNKILVSL 166

Query: 183 INKAGATAVGLSGMDGRLLMARPTPNSAQLGFVGEVTRVDSTILQPLIDNSHIPVIASVA 242
           INKA ATAVGLSG+DG+LL ARP+PNS+ LGFVGEV RVD  +L+ L+D+  IPV+ASVA
Sbjct: 167 INKADATAVGLSGVDGKLLTARPSPNSSNLGFVGEVARVDPAVLRSLVDSGQIPVVASVA 226

Query: 243 ADESGQSYNINADTVXXXXXXXXXXXXXXXXTDVAGILENKDDPKSLVKEIDIKGVKKLI 302
           ADESGQ YNINADTV                TDVAGILE+++DP+SLVK+IDIKGV K+I
Sbjct: 227 ADESGQLYNINADTVAGELAAALGAEKLILLTDVAGILEDRNDPESLVKKIDIKGVTKMI 286

Query: 303 EEKKVAGGMIPKVNCCVRSLAQGVRTASIIDGRVEHSLLHEIMSEEGIGTMITG 356
           E+  + GGMIPKVNCC+RSLAQGV+TASIIDGRV HSLL EI+++EG GTMITG
Sbjct: 287 EDGIIGGGMIPKVNCCIRSLAQGVKTASIIDGRVPHSLLLEILTDEGAGTMITG 340