Jatropha Genome Database
- JcCB0004761.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0004761.10 + phase: 0
(97 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g162290.1 Homeodomain-related; chr03_pseudomolecule_I... 96 6e-21
IMGA|Medtr5g020070.1 Homeodomain-like chr05_pseudomolecule_IMGAG... 91 1e-19
IMGA|Medtr7g106250.1 Homeodomain-related; chr07_pseudomolecule_I... 82 5e-17
IMGA|Medtr8g093090.1 Homeodomain-related; chr08_pseudomolecule_I... 81 1e-16
IMGA|Medtr8g093100.1 Homeodomain-related; chr08_pseudomolecule_I... 81 1e-16
IMGA|Medtr3g005020.1 Homeodomain-related; chr03_pseudomolecule_I... 80 2e-16
IMGA|Medtr8g093080.1 Homeodomain-related; chr08_pseudomolecule_I... 77 2e-15
IMGA|Medtr5g020430.1 Homeodomain-related; chr05_pseudomolecule_I... 77 3e-15
IMGA|Medtr5g078240.1 Homeodomain-related; chr05_pseudomolecule_I... 72 5e-14
IMGA|Medtr8g093060.1 Homeodomain-related; chr08_pseudomolecule_I... 69 7e-13
IMGA|Medtr5g089190.1 Homeodomain-related; chr05_pseudomolecule_I... 66 5e-12
IMGA|Medtr8g073480.1 Myb-like DNA-binding region, SHAQKYF class;... 62 9e-11
IMGA|AC233577_46.1 Homeodomain-related; AC233577.5 208388-207744... 57 2e-09
IMGA|Medtr7g133980.1 Homeodomain-like chr07_pseudomolecule_IMGAG... 54 1e-08
IMGA|Medtr1g105920.1 Homeodomain-like chr01_pseudomolecule_IMGAG... 52 7e-08
>IMGA|Medtr3g162290.1 Homeodomain-related;
chr03_pseudomolecule_IMGAG_V3 42354673-42354428 H
EGN_Mt090430 20090702
Length = 81
Score = 95.5 bits (236), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Query: 1 MGSCSLSNP---NSNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDI 57
M S SLS +S WT KQ+KLFE ALA +DKDTPDRW+N+AK VG + EEVKR Y++
Sbjct: 1 MASSSLSKHKPCDSIWTPKQNKLFEKALAKFDKDTPDRWQNVAKAVGGKSVEEVKRHYEL 60
Query: 58 LVNDINNIELDKVPIPNYKN 77
L+ D+ +IE VPIPNYK+
Sbjct: 61 LLEDLKHIESGHVPIPNYKS 80
>IMGA|Medtr5g020070.1 Homeodomain-like
chr05_pseudomolecule_IMGAG_V3 7556672-7556965 H
EGN_Mt090430 20090702
Length = 97
Score = 90.9 bits (224), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 6 LSNPNSN--WTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDIN 63
LS+PNS+ WT K++KLFE ALA+YDK+T DRW NIA VG T E E+K+ Y+IL DI
Sbjct: 10 LSSPNSSLQWTTKKNKLFENALAIYDKETSDRWYNIAMFVGGTTEVEIKKHYEILQEDIK 69
Query: 64 NIELDKVPIPNYK 76
NIE KVP+P Y+
Sbjct: 70 NIESGKVPLPAYR 82
>IMGA|Medtr7g106250.1 Homeodomain-related;
chr07_pseudomolecule_IMGAG_V3 24520776-24520321 H
EGN_Mt090430 20090702
Length = 92
Score = 82.4 bits (202), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 46/64 (71%)
Query: 15 AKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKVPIPN 74
K++K FE ALA+YDKDTPDRW N+A VG EEVK+ Y++LV DI +IE KVP PN
Sbjct: 14 VKENKAFERALAVYDKDTPDRWYNVAHAVGGKTPEEVKKHYELLVEDIKHIESGKVPFPN 73
Query: 75 YKNC 78
YK
Sbjct: 74 YKKI 77
>IMGA|Medtr8g093090.1 Homeodomain-related;
chr08_pseudomolecule_IMGAG_V3 20328444-20328687 E
EGN_Mt090430 20090702
Length = 72
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 11 SNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKV 70
++WTA+Q+KLFE ALA+YD++TP+RW N+AK+VG + E+VK Y+IL D+ IE +
Sbjct: 3 TSWTARQNKLFEQALALYDRETPERWHNVAKVVGKS-VEDVKSHYEILKEDVQRIEHGHI 61
Query: 71 PIPNYKN 77
P P YK
Sbjct: 62 PFPRYKT 68
>IMGA|Medtr8g093100.1 Homeodomain-related;
chr08_pseudomolecule_IMGAG_V3 20342487-20342733 E
EGN_Mt090430 20090702
Length = 73
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 11 SNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKV 70
++WTA+Q+KLFE ALA+YD++TP+RW N+AK+VG + E+VK Y+IL D+ IE +
Sbjct: 3 TSWTARQNKLFEQALALYDRETPERWHNVAKVVGKS-VEDVKSHYEILKEDVQRIEHGHI 61
Query: 71 PIPNYKN 77
P P YK
Sbjct: 62 PFPRYKT 68
>IMGA|Medtr3g005020.1 Homeodomain-related;
chr03_pseudomolecule_IMGAG_V3 85548-87058 F
EGN_Mt090430 20090702
Length = 91
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 1 MGSCSLSNPNSNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDT-NEEEVKREYDILV 59
M S S S +W+AK +K FE ALA++DKDTPDRW N+A+ VG E+VKR Y+ L+
Sbjct: 1 MASMSASG---SWSAKDNKAFERALAVFDKDTPDRWSNVAQAVGGGKTPEDVKRHYEHLL 57
Query: 60 NDINNIELDKVPIPNYKNC 78
D+ +IE +V PNYKN
Sbjct: 58 RDVRHIESGQVAFPNYKNI 76
>IMGA|Medtr8g093080.1 Homeodomain-related;
chr08_pseudomolecule_IMGAG_V3 20323556-20325425 E
EGN_Mt090430 20090702
Length = 66
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 11 SNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKV 70
++WTA+Q+KLFE ALA+YD++TP+RW N+AK+VG + E+VK Y+IL D+ IE +
Sbjct: 3 TSWTARQNKLFEQALALYDRETPERWHNVAKVVGKSV-EDVKSHYEILKEDVQRIEHGHI 61
Query: 71 PIP 73
P P
Sbjct: 62 PFP 64
>IMGA|Medtr5g020430.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 7721047-7720853 H
EGN_Mt090430 20090702
Length = 64
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 11 SNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKV 70
++WTA+Q+KLFE ALA+YD++TPDRW N+AK+VG + E+VKR Y+IL DI IE +V
Sbjct: 2 ASWTARQNKLFEEALAIYDRETPDRWHNVAKVVGKSV-EDVKRHYEILKEDIKRIERGEV 60
Query: 71 PIP 73
P
Sbjct: 61 AYP 63
>IMGA|Medtr5g078240.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 28984628-28986611 E
EGN_Mt090430 20090702
Length = 307
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 4 CSLSNPNSNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDIN 63
C N +NWT +++KLFE ALA++DKDTPDRW +A+++ +V R+Y L +D+
Sbjct: 20 CMEDNMATNWTPEENKLFENALAVHDKDTPDRWHKVAEMIPGKTVGDVMRQYKELEDDVC 79
Query: 64 NIELDKVPIPNY 75
NIE +P+P Y
Sbjct: 80 NIEAGLIPVPGY 91
>IMGA|Medtr8g093060.1 Homeodomain-related;
chr08_pseudomolecule_IMGAG_V3 20310348-20311251 F
EGN_Mt090430 20090702
Length = 72
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 11 SNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKV 70
S WT +Q+K FE ALA+YD+++PD+W+N+A +VG + E+VKR Y+IL D+ IE +V
Sbjct: 3 STWTPRQNKQFERALAIYDRESPDKWQNVANMVGKS-VEDVKRHYEILKEDVRRIEHGQV 61
Query: 71 PIP 73
P
Sbjct: 62 AFP 64
>IMGA|Medtr5g089190.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 34612404-34614655 E
EGN_Mt090430 20090702
Length = 271
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 10 NSNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDK 69
+ W+ + +K FE ALA+YDKDTPDRW +A+++ +V ++Y LV D++ IE
Sbjct: 24 QTEWSREDNKKFESALAIYDKDTPDRWLKVAEMIPGKTVFDVIKQYRELVEDVSEIEAGN 83
Query: 70 VPIPNY-----------KNCYEGKSRQESKIISNNEEER 97
VPIP Y K Y+G R+ + ++ E +
Sbjct: 84 VPIPGYLASSFTFEVVEKQNYDGNRRRHVTVRGSDHERK 122
>IMGA|Medtr8g073480.1 Myb-like DNA-binding region, SHAQKYF class;
Homeodomain-like; chr08_pseudomolecule_IMGAG_V3
14339736-14342896 H EGN_Mt090430 20090702
Length = 290
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 13 WTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKVPI 72
W+ Q K FE LA Y +D DRW IA V EE+KR Y +L +DIN+IE VP+
Sbjct: 10 WSRDQDKAFENTLANYPEDAVDRWEKIAADVPGKTLEEIKRHYVVLFDDINHIESGFVPL 69
Query: 73 PNYKN--------CYEGKSRQESKIISNNEEER 97
P+Y + EG + ++ S++ +ER
Sbjct: 70 PDYDSFSKSSTTCAGEGGAVKKGTKASSSYQER 102
>IMGA|AC233577_46.1 Homeodomain-related; AC233577.5 208388-207744
F EGN_Mt090430 20090702
Length = 176
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 11 SNWTAKQHKLFEYALAMYDKDTPDRWRNIAKIVGDTNEEEVKREYDILVNDINNIELDKV 70
+ WT KLFE AL M +D PDRW IA+ V + E++ Y+ LV+DI I+ +V
Sbjct: 22 TQWTRDHDKLFERALLMVPEDLPDRWEKIAEQVPGKSAAEIRDHYEALVHDILEIDSGRV 81
Query: 71 PIPNYKN 77
+P+Y +
Sbjct: 82 EVPSYSD 88
>IMGA|Medtr7g133980.1 Homeodomain-like
chr07_pseudomolecule_IMGAG_V3 31521964-31523169 E
EGN_Mt090430 20090702
Length = 87
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 12 NWTAKQHKLFEYALAMYDKDTPDRWRNIAKIV-GDTNEEEVKREYDILVNDINNIELDKV 70
W+ K++KLFE ALAM D+ P+RW +A +V GD + +V+ Y IL+ D++ IE KV
Sbjct: 7 GWSWKENKLFELALAMVDEKHPERWEVVAAMVGGDKSAGDVQEHYVILLEDLHVIESGKV 66
>IMGA|Medtr1g105920.1 Homeodomain-like
chr01_pseudomolecule_IMGAG_V3 21954358-21953619 E
EGN_Mt090430 20090702
Length = 93
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 12 NWTAKQHKLFEYALAMYDKDTPDRWRNIAKIV-GDTNEEEVKREYDILVNDINNIE 66
W+ K++KLFE ALA+ D+ P+RW +A +V G+ + EV++ Y IL+ D+ IE
Sbjct: 10 GWSWKENKLFELALALVDESHPERWEMVAAMVGGEKSAGEVQKHYVILLEDLELIE 65