Jatropha Genome Database
- JcCB0001721.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0001721.10 + phase: 1 /partial
(205 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g039870.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3... 347 3e-96
IMGA|Medtr3g076130.1 Amine oxidase; SWIRM chr03_pseudomolecule_I... 59 2e-09
IMGA|Medtr3g086600.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3... 54 5e-08
IMGA|Medtr3g086600.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3... 54 5e-08
IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3... 54 7e-08
IMGA|Medtr1g028330.1 Amine oxidase; SWIRM chr01_pseudomolecule_I... 54 8e-08
>IMGA|Medtr3g039870.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
10694186-10683854 E EGN_Mt090430 20090702
Length = 501
Score = 347 bits (889), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 168/205 (81%), Positives = 191/205 (93%)
Query: 1 PCSPEKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAM 60
PC PEKEFF+YAHE+RGYYTFWQHM+NAYPGSNILVVTLTNGESKRVEAQ++EETL+EAM
Sbjct: 297 PCGPEKEFFMYAHEQRGYYTFWQHMDNAYPGSNILVVTLTNGESKRVEAQTNEETLREAM 356
Query: 61 EVLRDMFGPNIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVGRIFFTGEH 120
VLRDMFGPNIP+A DILVP WWNNRFQRGSYSN+PIISN +V ++IK+PVGRIFFTGEH
Sbjct: 357 AVLRDMFGPNIPDAIDILVPCWWNNRFQRGSYSNFPIISNGKVFYNIKAPVGRIFFTGEH 416
Query: 121 TSERFNGYVHGGYLSGIDTSKSLLEVMREEKGRKNESQTFLLEPLLALTGSLTLTQTEAV 180
TSERFNGYVHGGYL+GIDT K+L+E +R+E R++ESQT LLEPLLALTGSLT ++ E V
Sbjct: 417 TSERFNGYVHGGYLAGIDTGKALVEEIRKENERESESQTLLLEPLLALTGSLTKSKPETV 476
Query: 181 SSLHKCDIPTQLYLSGKLGIPEAIL 205
S++HKCDIPTQLYLSGKLGIPEAIL
Sbjct: 477 SNIHKCDIPTQLYLSGKLGIPEAIL 501
>IMGA|Medtr3g076130.1 Amine oxidase; SWIRM
chr03_pseudomolecule_IMGAG_V3 17547835-17545029 E
EGN_Mt090430 20090702
Length = 748
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 12 AHERRGYYTFWQ-HMENAYPGSNILVVTLTNGESKRVEAQSDEETL-KEAMEVLRDMFGP 69
+H+R ++ F+ H + P ++ L GE+ +D L + L+ +F P
Sbjct: 459 SHDRGEFFLFYGYHTVSGGPA----LIALVAGEAAHAFETTDPSILLNRVLTTLKGIFQP 514
Query: 70 ---NIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVG-RIFFTGEHTSERF 125
N+P+ + RW ++ F GSYS+ + S+ + + VG R+FF GE TS ++
Sbjct: 515 KGINVPDPIQSICTRWGSDPFSYGSYSHVSVQSSGKDYDILAENVGNRLFFAGEATSRQY 574
Query: 126 NGYVHGGYLSGIDTSKSLLEV 146
+HG ++SG+ + + ++
Sbjct: 575 PATMHGAFMSGLREASCIYQL 595
>IMGA|Medtr3g086600.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
20299092-20305101 E EGN_Mt090430 20090702
Length = 496
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 31 GSNILVVTLTNGESKRVEAQSDEETLKEAMEVLRDMFGPNIPNATDILVPRWWNNRFQRG 90
G+ +LV + +E SDE M L+ MF P+ LV W + G
Sbjct: 350 GNPVLVYMAAGRFAYDLEKLSDESAANFVMLQLKKMF-PDACEPVQYLVSHWGTDPNSLG 408
Query: 91 SYSNYPIISNNQVLHD-IKSPVGRIFFTGEHTSERFNGYVHGGYLSGIDTSKSLLEVMRE 149
YS Y ++ + ++D +++P+G IFF GE S G VHG Y +G+ +++ + E
Sbjct: 409 CYS-YDLVGKSMDVYDKLRAPLGNIFFGGEAMSLDNQGSVHGAYSAGVMAAENCQRYLWE 467
Query: 150 EKG 152
++G
Sbjct: 468 KQG 470
>IMGA|Medtr3g086600.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3
20299092-20305101 E EGN_Mt090430 20090702
Length = 270
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 31 GSNILVVTLTNGESKRVEAQSDEETLKEAMEVLRDMFGPNIPNATDILVPRWWNNRFQRG 90
G+ +LV + +E SDE M L+ MF P+ LV W + G
Sbjct: 124 GNPVLVYMAAGRFAYDLEKLSDESAANFVMLQLKKMF-PDACEPVQYLVSHWGTDPNSLG 182
Query: 91 SYSNYPIISNNQVLHD-IKSPVGRIFFTGEHTSERFNGYVHGGYLSGIDTSKSLLEVMRE 149
YS Y ++ + ++D +++P+G IFF GE S G VHG Y +G+ +++ + E
Sbjct: 183 CYS-YDLVGKSMDVYDKLRAPLGNIFFGGEAMSLDNQGSVHGAYSAGVMAAENCQRYLWE 241
Query: 150 EKG 152
++G
Sbjct: 242 KQG 244
>IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3
38819227-38814231 F EGN_Mt090430 20090702
Length = 488
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 4 PEKEFFIYAHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAMEVL 63
P EF E +++ ++ A G +LV +K +E SDE A L
Sbjct: 320 PNVEFLGVVAETSYGCSYFLNLHKA-AGHPVLVYMPAGRLAKDIEKMSDEAAADFAFTQL 378
Query: 64 RDMFGPNIPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVGRIFFTGEHTSE 123
+ + P+ + LV RW + GSYS + + + ++ PV +FF GE TS
Sbjct: 379 KKIL-PDASSPIQYLVSRWGTDINSLGSYSFDAVGKPHGLYERLRVPVDNLFFAGEATSV 437
Query: 124 RFNGYVHGGYLSG 136
+ G VHG Y +G
Sbjct: 438 LYTGSVHGAYSTG 450
>IMGA|Medtr1g028330.1 Amine oxidase; SWIRM
chr01_pseudomolecule_IMGAG_V3 6838806-6852075 E
EGN_Mt090430 20090702
Length = 1932
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 8 FFIYAHER--RGY-YTFWQHMENAYPGSNILVVTLTNGESKRVEAQSDEETLKEAMEVLR 64
F A ER RG+ + FW + G+ +L+ + + ++ S ++ + A++VLR
Sbjct: 1206 FGATAEERSKRGHCFMFWNVKKTV--GAPVLIALVVGKAAIDGQSLSSQDHINHALKVLR 1263
Query: 65 DMFGPN-IPNATDILVPRWWNNRFQRGSYSNYPIISNNQVLHDIKSPVGR-IFFTGEHTS 122
+FG + +P+ +V W + + G+YS + ++ + I PV +FF GE T
Sbjct: 1264 KLFGEDSVPDPVAYVVTDWGRDPYSFGAYSYVAVGASGEDYDIIGRPVDNCLFFAGEATC 1323
Query: 123 ERFNGYVHGGYLSGIDTSKSLLEVMREEKGRKNESQTFLLEPLLALTGSLTLTQTEAVSS 182
+ V G +SG+ + +++++ G N ++ +E L A G L + E
Sbjct: 1324 KEHPDTVGGAMMSGLREAVRIIDILN--TGNDNTAE---VEALEAAQGQLDTERNEVRDI 1378
Query: 183 LHKCD 187
+ + D
Sbjct: 1379 IKRLD 1383