Jatropha Genome Database

JcCA0317991.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317991.30 - phase: 0 /pseudo
         (798 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g026550.1 Chaperonin Cpn60/TCP-1; Phosphatidylinosito...   210   2e-54
IMGA|Medtr8g133260.1 Phosphatidylinositol-4-phosphate 5-kinase c...   190   2e-48

>IMGA|Medtr8g026550.1 Chaperonin Cpn60/TCP-1;
            Phosphatidylinositol-4-phosphate 5-kinase; Zinc finger,
            FYVE/PHD-type chr08_pseudomolecule_IMGAG_V3
            5728508-5740160 E EGN_Mt090430 20090702
          Length = 1811

 Score =  210 bits (535), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 191/317 (60%), Gaps = 20/317 (6%)

Query: 1    MVACFRYASIDVHSVYLPPSKLEFNYDNQEWIQKEVNEVRQRADLLFKEVQNSLHRISEK 60
            MVACFRYASIDVHSVYLPP KL F+Y NQ+WIQKE +EV  RA+LLF E+ N L +I EK
Sbjct: 1017 MVACFRYASIDVHSVYLPPHKLNFDYGNQDWIQKETDEVVNRAELLFSEILNGLGQIGEK 1076

Query: 61   ASSVGSQNGDLKASELATFRVVELEGILQKNKEEFEESFRNMPSKEVKVGRP--VIDILE 118
             SS    N   K  E+   +V ELEG+LQ+ K EFEE+ + + ++E + G+P   IDILE
Sbjct: 1077 RSSASQINSGHKTPEIRR-QVAELEGMLQREKLEFEETLQKILNQEKRNGQPGTGIDILE 1135

Query: 119  INKLRRQILFNCIAWNETLKDADRLSTTILHEGQRSFIPKLKEKFVNSVENL-VEIDLSP 177
            +N+L RQ+LF    W+  L  AD L+ +    G  S I +  E  ++  ENL  ++ L+ 
Sbjct: 1136 VNRLWRQLLFQSYMWDHRLIYADSLANSNNETGLSSSISEDMEIPID--ENLTTDVSLA- 1192

Query: 178  KLGKSFSSCDSVPVDTKPVVNLNQGGNDSYIHQPVRVHEGRGMDLDLNLRKEAARSLSSS 237
              G+ FSS DS+      VV+     +D++ HQ V + + +  +      KE   +LS S
Sbjct: 1193 --GRGFSSVDSI----CGVVDAKSSQSDAF-HQEVDMVKNKQNE------KEEQPNLSIS 1239

Query: 238  ENINEKSDPSESGNAVRRVHSEGEFPIMDNLSDTLDAAWIGKNQPGSMTLKDNGSSLPDP 297
            ++IN++SD  E    VRR  SEG FP++ +LS+TLDA W G+NQ G  T KD+ S  PD 
Sbjct: 1240 KSINDQSDLLEPELGVRRALSEGPFPVVPSLSETLDAKWTGENQSGIGTQKDSTSVNPDT 1299

Query: 298  AAVNSVAANTDLEIILL 314
            +  +++ A    E   L
Sbjct: 1300 STADALTATVQREAYHL 1316


>IMGA|Medtr8g133260.1 Phosphatidylinositol-4-phosphate 5-kinase
           chr08_pseudomolecule_IMGAG_V3 31687489-31693414 E
           EGN_Mt090430 20090702
          Length = 1166

 Score =  190 bits (483), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/305 (43%), Positives = 180/305 (59%), Gaps = 21/305 (6%)

Query: 1   MVACFRYASIDVHSVYLPPSKLEFNYDNQEWIQKEVNE-VRQRADLLFKEVQNSLHRISE 59
           MVACFRYASID++SVYLPPSKLEFNYD+Q+W+QKE +E V  +A++LF EV ++L++ISE
Sbjct: 383 MVACFRYASIDLNSVYLPPSKLEFNYDSQDWLQKEAHEQVHNKAEILFSEVCSALNQISE 442

Query: 60  KASSVGSQNGDLKASELATFR--VVELEGILQKNKEEFEESFRNMPSKEVKVGRPVIDIL 117
           K S    Q G      +A FR  +VEL+ ILQK KEE E +           G  ++D+L
Sbjct: 443 KFSGSVLQEG---GKAVADFRHLIVELKEILQKEKEESERAI---------AGGLMVDVL 490

Query: 118 EINKLRRQILFNCIAWNETLKDADRLSTTILHEGQRSFIPKLKEKFVNSVENLVEIDLSP 177
           E+ KLRR IL     W++ L  A         E  ++   K+K   + S E  VE D+  
Sbjct: 491 ELCKLRRHILILSFVWDQRLIYASNQGKITFSEDSKNSYQKVKS--IGSKEKAVETDVVT 548

Query: 178 KLGKSFSSCDSVPVDTKPVVNLNQGGNDSYIHQPVRVHEGRGMDLDLNLRKEAARSLSSS 237
           +  +S SS DS  ++TKP  NL+   N S++ Q   + +G     D+   K    SLS  
Sbjct: 549 RSARSHSSSDSFLLETKPDGNLDL-ENSSHLSQSGEMIKGEDKSKDIGQSK-FDLSLSHD 606

Query: 238 ENINEKSDPSESGNAV--RRVHSEGEFPIMDNLSDTLDAAWIGKNQPGSMTLKDNGSSLP 295
            NIN+KS+ SE G A+  RR  SEG    + NLSDTLDAAW G+N P ++  ++NG   P
Sbjct: 607 ANINDKSNSSEFGGAIRRRRTSSEGGSRNVANLSDTLDAAWTGENHPENILYEENGCPAP 666

Query: 296 DPAAV 300
           D AAV
Sbjct: 667 DVAAV 671