Jatropha Genome Database

JcCA0317991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317991.10 - phase: 0 /pseudo/partial
         (298 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g084310.1 hypothetical protein chr07_pseudomolecule_I...   153   9e-38
IMGA|AC235749_24.1 hypothetical protein AC235749.1 69824-68762 E...   146   1e-35

>IMGA|Medtr7g084310.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 18184753-18186767 E
           EGN_Mt090430 20090702
          Length = 242

 Score =  153 bits (387), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 107/157 (68%), Gaps = 1/157 (0%)

Query: 35  EAVLYTASFEEMEEKFIKYQTAQWVMYSLLLILAWGIGLFMLLYLPVRRYILRKDIQSRK 94
           E ++Y+ SFEE+    IKY T  W+  SLLL+LAWG GL MLLYLP RRY+LRKD+ SR+
Sbjct: 37  EQIVYSTSFEELASSSIKYDTVIWLSISLLLVLAWGFGLLMLLYLPFRRYVLRKDLSSRR 96

Query: 95  LYLTPNAIVYKVTKPVAFPCFGVLKKEKHILLPSVADIVIEQGYLQSLFGVCSLRIENVG 154
           LY+T   +VY+V++P   P +G +  E+ + L  V DI+IEQG LQS++GV + R+E++ 
Sbjct: 97  LYVTHTEVVYEVSRPSYIPFWGTITIERRLPLSLVIDIIIEQGCLQSIYGVHTFRVESIA 156

Query: 155 VRRPPS-DDVQIQGVANPNAFKKAVLTRLSYMRNEFG 190
             +  + D +Q QG+++P+  +K ++T  S +  + G
Sbjct: 157 HGKAAAIDQLQAQGISDPDLLRKVIITEASKISRDLG 193


>IMGA|AC235749_24.1 hypothetical protein AC235749.1 69824-68762 E
           EGN_Mt090430 20090702
          Length = 221

 Score =  146 bits (369), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/143 (47%), Positives = 100/143 (69%), Gaps = 1/143 (0%)

Query: 35  EAVLYTASFEEMEEKFIKYQTAQWVMYSLLLILAWGIGLFMLLYLPVRRYILRKDIQSRK 94
           E ++Y+ASFEE+    IKY T  W+  SLLL+LAWG GL MLLYLP RRY+LRKD+ SR+
Sbjct: 37  EQIVYSASFEELASSSIKYDTVIWLSISLLLVLAWGFGLLMLLYLPFRRYVLRKDLSSRR 96

Query: 95  LYLTPNAIVYKVTKPVAFPCFGVLKKEKHILLPSVADIVIEQGYLQSLFGVCSLRIENVG 154
           LY+T   +VY+V++P   P +G +  E+   L  V DI+IEQG LQS++GV + R+E++ 
Sbjct: 97  LYITHTEVVYEVSRPSYIPFWGTITIERRSPLSLVIDIIIEQGCLQSIYGVHTFRVESIA 156

Query: 155 VRRPPS-DDVQIQGVANPNAFKK 176
             +  + D +Q QG+++P+  +K
Sbjct: 157 HGKAAAIDQLQAQGISDPDLLRK 179