Jatropha Genome Database

JcCA0317741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317741.10 + phase: 1 /partial
         (195 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g098260.1 Hydroxymethylglutaryl-coenzyme A reductase ...   334   2e-92
IMGA|Medtr5g026580.1 Hydroxymethylglutaryl-coenzyme A reductase ...   334   2e-92
IMGA|Medtr5g026630.1 Hydroxymethylglutaryl-coenzyme A reductase ...   333   3e-92
IMGA|Medtr5g026620.1 Hydroxymethylglutaryl-coenzyme A reductase ...   332   5e-92
IMGA|Medtr5g026610.1 Hydroxymethylglutaryl-coenzyme A reductase ...   332   5e-92
IMGA|Medtr5g026600.1 Hydroxymethylglutaryl-coenzyme A reductase ...   332   5e-92
IMGA|Medtr5g026590.1 Hydroxymethylglutaryl-coenzyme A reductase ...   332   5e-92
IMGA|Medtr8g087140.1 Hydroxymethylglutaryl-coenzyme A reductase ...   330   2e-91
IMGA|Medtr5g024810.1 Hydroxymethylglutaryl-coenzyme A reductase ...   328   1e-90
IMGA|Medtr5g094670.1 Hydroxymethylglutaryl-coenzyme A reductase ...   320   2e-88
IMGA|Medtr5g024810.2 Hydroxymethylglutaryl-coenzyme A reductase ...   188   1e-48

>IMGA|Medtr5g098260.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 39171483-39173766 F
           EGN_Mt090430 20090702
          Length = 545

 Score =  334 bits (857), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/195 (83%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKEEVVK VLKT+V SLVELNMLKN         
Sbjct: 351 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVESLVELNMLKNLTGSAMAGA 410

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSA+++ATGQDPAQN+ESSHC+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 411 LGGFNAHASNIVSAVYLATGQDPAQNVESSHCMTMMEAVNDGKDLHISVTMPSIEVGTVG 470

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKESPG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 471 GGTQLASQSACLNLLGVKGASKESPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 530

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS+KDV++VAS
Sbjct: 531 MKYNRSNKDVTKVAS 545


>IMGA|Medtr5g026580.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 10727986-10730916 E
           EGN_Mt090430 20090702
          Length = 542

 Score =  334 bits (856), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/195 (83%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKEEVVK VLKT+V SLVELNMLKN         
Sbjct: 348 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVESLVELNMLKNLTGSAMAGA 407

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAI++ATGQDPAQN+ESSHC+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 408 LGGFNAHASNIVSAIYLATGQDPAQNVESSHCMTMMEAVNDGKDLHISVTMPSIEVGTVG 467

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKE+PG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 468 GGTQLASQSACLNLLGVKGASKETPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 527

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS+KDV++VAS
Sbjct: 528 MKYNRSNKDVTKVAS 542


>IMGA|Medtr5g026630.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 10755405-10753357 F
           EGN_Mt090430 20090702
          Length = 550

 Score =  333 bits (854), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 163/195 (83%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKEEVVK VLKT+V SLVELNMLKN         
Sbjct: 356 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVESLVELNMLKNLTGSAMAGA 415

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAI++ATGQDPAQN+ESSHC+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 416 LGGFNAHASNIVSAIYLATGQDPAQNVESSHCMTMMEAVNDGKDLHISVTMPSIEVGTVG 475

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKE+PG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 476 GGTQLASQSACLNLLGVKGASKETPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 535

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS+KDV++VAS
Sbjct: 536 MKYNRSNKDVTKVAS 550


>IMGA|Medtr5g026620.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 10751325-10749286 E
           EGN_Mt090430 20090702
          Length = 542

 Score =  332 bits (852), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKE+VVK VLKT+V SLVELNMLKN         
Sbjct: 348 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEDVVKKVLKTSVESLVELNMLKNLTGSAMAGA 407

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAI++ATGQDPAQN+ESSHC+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 408 LGGFNAHASNIVSAIYLATGQDPAQNVESSHCMTMMEAVNDGKDLHISVTMPSIEVGTVG 467

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKE+PG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 468 GGTQLASQSACLNLLGVKGASKETPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 527

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS+KDV++VAS
Sbjct: 528 MKYNRSNKDVTKVAS 542


>IMGA|Medtr5g026610.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 10746320-10744223 E
           EGN_Mt090430 20090702
          Length = 542

 Score =  332 bits (852), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKE+VVK VLKT+V SLVELNMLKN         
Sbjct: 348 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEDVVKKVLKTSVESLVELNMLKNLTGSAMAGA 407

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAI++ATGQDPAQN+ESSHC+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 408 LGGFNAHASNIVSAIYLATGQDPAQNVESSHCMTMMEAVNDGKDLHISVTMPSIEVGTVG 467

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKE+PG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 468 GGTQLASQSACLNLLGVKGASKETPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 527

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS+KDV++VAS
Sbjct: 528 MKYNRSNKDVTKVAS 542


>IMGA|Medtr5g026600.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 10741249-10739168 E
           EGN_Mt090430 20090702
          Length = 542

 Score =  332 bits (852), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKE+VVK VLKT+V SLVELNMLKN         
Sbjct: 348 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEDVVKKVLKTSVESLVELNMLKNLTGSAMAGA 407

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAI++ATGQDPAQN+ESSHC+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 408 LGGFNAHASNIVSAIYLATGQDPAQNVESSHCMTMMEAVNDGKDLHISVTMPSIEVGTVG 467

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKE+PG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 468 GGTQLASQSACLNLLGVKGASKETPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 527

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS+KDV++VAS
Sbjct: 528 MKYNRSNKDVTKVAS 542


>IMGA|Medtr5g026590.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 10736261-10734069 E
           EGN_Mt090430 20090702
          Length = 542

 Score =  332 bits (852), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKE+VVK VLKT+V SLVELNMLKN         
Sbjct: 348 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEDVVKKVLKTSVESLVELNMLKNLTGSAMAGA 407

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAI++ATGQDPAQN+ESSHC+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 408 LGGFNAHASNIVSAIYLATGQDPAQNVESSHCMTMMEAVNDGKDLHISVTMPSIEVGTVG 467

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKE+PG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 468 GGTQLASQSACLNLLGVKGASKETPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 527

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS+KDV++VAS
Sbjct: 528 MKYNRSNKDVTKVAS 542


>IMGA|Medtr8g087140.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr08_pseudomolecule_IMGAG_V3 18049162-18045484 E
           EGN_Mt090430 20090702
          Length = 583

 Score =  330 bits (847), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 160/195 (82%), Positives = 176/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKEEVVK VLKT+V +LVELNMLKN         
Sbjct: 389 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVEALVELNMLKNLTGSALAGA 448

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSA++IATGQDPAQN+ESSHCITMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 449 LGGFNAHASNIVSAVYIATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVG 508

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGA+ ESPG+N+RLLATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 509 GGTQLASQSACLNLLGVKGANTESPGANARLLATIVAGSVLAGELSLMSAIAAGQLVKSH 568

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRSS+D+S++ S
Sbjct: 569 MKYNRSSRDMSKIVS 583


>IMGA|Medtr5g024810.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 9907562-9910894 E
           EGN_Mt090430 20090702
          Length = 567

 Score =  328 bits (840), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 161/195 (82%), Positives = 174/195 (89%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKEEVVK VLK +V SLVELNMLKN         
Sbjct: 373 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKISVESLVELNMLKNLTGSAMAGA 432

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAI++ATGQDPAQN+ESS C+TMMEAVNDGKDLH+SV+MPSIEVGTVG
Sbjct: 433 LGGFNAHASNIVSAIYLATGQDPAQNVESSQCMTMMEAVNDGKDLHISVTMPSIEVGTVG 492

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLNLLGVKGASKE+PG+NSR LATIVAGSVLAGELSLMSAIAAGQLV SH
Sbjct: 493 GGTQLASQSACLNLLGVKGASKETPGANSRQLATIVAGSVLAGELSLMSAIAAGQLVKSH 552

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRSSKDV++V S
Sbjct: 553 MKYNRSSKDVTKVTS 567


>IMGA|Medtr5g094670.1 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 37470548-37474321 E
           EGN_Mt090430 20090702
          Length = 565

 Score =  320 bits (821), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 164/195 (84%), Positives = 177/195 (90%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           NYCSDKKPAAVNWIEGRGKSVVCEAIIKE+VVK VLKT VA+LVELNMLKN         
Sbjct: 371 NYCSDKKPAAVNWIEGRGKSVVCEAIIKEDVVKKVLKTKVAALVELNMLKNLAGSAVAGT 430

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEVGTVG 120
              FNAHA NIVSAIFIATGQDPAQN+ESSHCITMMEAVNDG+DLH+SV+MPSIEVGTVG
Sbjct: 431 LGGFNAHASNIVSAIFIATGQDPAQNVESSHCITMMEAVNDGRDLHISVTMPSIEVGTVG 490

Query: 121 GGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLMSAIAAGQLVNSH 180
           GGTQLASQSACLN+LGVKGASKE PGSNSRLLATIVAG+VLAGELSLMSAIA+GQLV SH
Sbjct: 491 GGTQLASQSACLNMLGVKGASKEEPGSNSRLLATIVAGAVLAGELSLMSAIASGQLVKSH 550

Query: 181 MKYNRSSKDVSRVAS 195
           MKYNRS KDV++++S
Sbjct: 551 MKYNRSCKDVTKISS 565


>IMGA|Medtr5g024810.2 Hydroxymethylglutaryl-coenzyme A reductase
           chr05_pseudomolecule_IMGAG_V3 9907562-9909795 E
           EGN_Mt090430 20090702
          Length = 488

 Score =  188 bits (477), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 89/116 (76%), Positives = 98/116 (84%)

Query: 1   NYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKNVLKTNVASLVELNMLKNXXXXXXXXX 60
           N+CSDKK AAVNWIEGRGKSVVCEA+IKEEVVK VLK +V SLVELNMLKN         
Sbjct: 373 NFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKISVESLVELNMLKNLTGSAMAGA 432

Query: 61  XXXFNAHAGNIVSAIFIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVSMPSIEV 116
              FNAHA NIVSAI++ATGQDPAQN+ESS C+TMMEAVNDGKDLH+SV+MPSIEV
Sbjct: 433 LGGFNAHASNIVSAIYLATGQDPAQNVESSQCMTMMEAVNDGKDLHISVTMPSIEV 488