Jatropha Genome Database

JcCA0317621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317621.10 + phase: 0 
         (289 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g134330.1 hypothetical protein chr08_pseudomolecule_I...   162   3e-40
IMGA|Medtr5g038340.1 hypothetical protein chr05_pseudomolecule_I...    97   7e-21
IMGA|Medtr8g147140.1 hypothetical protein chr08_pseudomolecule_I...    83   2e-16

>IMGA|Medtr8g134330.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 32282987-32284355 E
           EGN_Mt090430 20090702
          Length = 300

 Score =  162 bits (409), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 143/251 (56%), Gaps = 16/251 (6%)

Query: 23  LNPCRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISSGSYRVLEIDYAYQSL 82
           L+PC++ CG I I+YPFSL+ GCG P FR++  C    L F   SGSY+V  IDY  +S+
Sbjct: 31  LSPCKTSCGTIPINYPFSLEDGCGAPQFRNMFNCTTTELFFQTPSGSYKVQSIDYNKKSM 90

Query: 83  TLHEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAKSPLFQGFPGKHL 142
            L++P +S C  +      + F +   +S    P+ D VF+L+ CS  SP+   +  K+L
Sbjct: 91  VLYDPSMSTCSIL---QPHHDFLMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHY--KYL 145

Query: 143 PCRNVSGMGCEEYY-GCPAWSVVGRRHAGSMFGSGPPECCAVAFEAIKAINLSKLECEGY 201
            C N  G  C+E Y GC A+ V        M  S PP CC  ++  +K ++++ L+C  Y
Sbjct: 146 -CFNFEGHTCDELYGGCNAFRVFHL-----MTNSSPP-CCFTSYNTMKFMSMNILDCTHY 198

Query: 202 SSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEFCRACEATGGTCGYGSDGIRQMCMCADF 261
           +S ++   LR  GP +W +GI++ +SV +    C +C  +GG CG+ ++    +C+C+ F
Sbjct: 199 TSVFNSDKLRGVGPLDWVYGIKLSFSVPDTG--CESCGQSGGICGFDTETEALLCLCSSF 256

Query: 262 -NSTSNCDSGT 271
            NST  C +GT
Sbjct: 257 TNSTRGCAAGT 267


>IMGA|Medtr5g038340.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 16206197-16203106 E
           EGN_Mt090430 20090702
          Length = 329

 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 28/255 (10%)

Query: 26  CRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISSGSYRVLEIDYAYQSLTLH 85
           C+  CG  T+ YPF    GCG P F+  + C    L F   +GSY +  IDYA Q + + 
Sbjct: 27  CQRNCGKETLKYPFGSGPGCGDPRFQPHITCSQQKLTFTTHTGSYPITSIDYANQVIYIS 86

Query: 86  EPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSA------KSPLFQGFPG 139
           +P +S C +  L SKG G     W +P F      +F L+ CS       KS  +     
Sbjct: 87  DPTMSTC-SCTLPSKGFGLD---WNAP-FTFDDSTIFALVDCSMNSSSICKSRSYDDGSN 141

Query: 140 KHLPCRNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCA---VAFEAIKAINLSKL 196
             L C   + + C+  Y C        R   +        CC    V       ++L KL
Sbjct: 142 SKLQCDQNTQI-CDVMYSC--------RPISTNINLPISTCCVYTPVNLGPAFDMDLQKL 192

Query: 197 ECEGYSSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEF---CRACEATGGTCGYGSDGIR 253
           +C  Y+  Y+    +VD P +W++GI +KY      ++   C ACE + G CGY      
Sbjct: 193 QCSSYTGFYNYNDQQVD-PEKWNYGIALKYKFSVTNDYPSSCAACERSFGFCGYSEAYNS 251

Query: 254 QMCMCAD-FNSTSNC 267
            +C C +  N+T++C
Sbjct: 252 FLCNCPNGINTTTDC 266


>IMGA|Medtr8g147140.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 36145988-36147689 F
           EGN_Mt090430 20090702
          Length = 333

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 29/256 (11%)

Query: 26  CRSYCGNITIDYPFSLQYGCGHPGFRDLLFCIN-DVLMFHISSGSYRVLEIDYAYQSLTL 84
           CR+ CG+I I YPFS+  GCG P +R +L C +   L     SG Y +  + Y    + +
Sbjct: 37  CRTSCGSIPIQYPFSIDDGCGSPYYRFILSCSDTQKLELRTPSGRYPIHNVSYIDPHIVV 96

Query: 85  HEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAKSPLFQGFPGKHLPC 144
            +P + NC+  V       FS++   S  F  ++ N ++   CS +  + +  P      
Sbjct: 97  TDPFMWNCEDGVNYRPTRPFSLD--TSTRFKLSSQNQYIFFNCSEEKVIVKPKP------ 148

Query: 145 RNVSGMGCEEY-----YGCPAWSVVGRRHAGSMFGSGPPECCAVAFEAIKAINLSKLECE 199
                + CE++       C + S + R      F      CC+   +A +++ L    C 
Sbjct: 149 -----VFCEQFPEHCDSSCDSASYLCRHLPECSFAMSGSSCCSYKPKATESLRLMLEYCT 203

Query: 200 GYSSAYSL---APLRVDGPSEWSFGIRVKYSVQENEEFCRACEAT----GGTCGYGSDGI 252
            Y+S Y     AP   D   +  +GIR+ + +      C  C+      GGTCG+ +   
Sbjct: 204 SYASVYWRNVGAPQLYDQVPQ--YGIRIDFDIPVTTR-CLQCQDQSKGGGGTCGFDTQTQ 260

Query: 253 RQMCMCADFNSTSNCD 268
             +C+C + N T++C+
Sbjct: 261 SFLCLCKEGNFTTHCN 276