Jatropha Genome Database

JcCA0317481.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317481.40 - phase: 2 /partial
         (151 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g101130.1 EPS15 homology (EH); Dynamin chr05_pseudomo...   287   1e-78
IMGA|Medtr2g029240.1 EPS15 homology (EH); Dynamin; Actin-binding...   267   1e-72
IMGA|Medtr8g147510.1 EPS15 homology (EH); Dynamin chr08_pseudomo...   267   1e-72

>IMGA|Medtr5g101130.1 EPS15 homology (EH); Dynamin
           chr05_pseudomolecule_IMGAG_V3 40458795-40464475 E
           EGN_Mt090430 20090702
          Length = 557

 Score =  287 bits (735), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 137/151 (90%), Positives = 143/151 (94%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SFNDKPVN+A  GPIGKELFEKEQEDLLSDLKDIPK ACDRRINEFVKRARAAKIHAYII
Sbjct: 407 SFNDKPVNDAVSGPIGKELFEKEQEDLLSDLKDIPKAACDRRINEFVKRARAAKIHAYII 466

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLKKEMPAMMGKAK QQ+LID+LA EFGKVQREFHLPPGDFPNVEHFRE LSGYNIDKF
Sbjct: 467 SHLKKEMPAMMGKAKAQQKLIDNLAGEFGKVQREFHLPPGDFPNVEHFRESLSGYNIDKF 526

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPYD 151
           EKLKPKM+Q VDDML YDIP+LLKNF+NPYD
Sbjct: 527 EKLKPKMLQVVDDMLAYDIPNLLKNFKNPYD 557


>IMGA|Medtr2g029240.1 EPS15 homology (EH); Dynamin; Actin-binding,
           actinin-type chr02_pseudomolecule_IMGAG_V3
           7748883-7753752 E EGN_Mt090430 20090702
          Length = 540

 Score =  267 bits (683), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 125/151 (82%), Positives = 138/151 (91%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SFNDKP NE    P+GK LFEKEQ DLL+DL DIPKKACDRRINEFVKRAR+AKIHAYII
Sbjct: 390 SFNDKPTNEGFADPLGKNLFEKEQNDLLADLLDIPKKACDRRINEFVKRARSAKIHAYII 449

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLKKEMP MMGKAK QQ+LID+L +EF KV+RE+HLPPGDFP+VEHFREVLSGY+IDKF
Sbjct: 450 SHLKKEMPTMMGKAKAQQKLIDNLDNEFAKVKREYHLPPGDFPSVEHFREVLSGYSIDKF 509

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPYD 151
           EKLKPKMIQA+DDMLGY+IP+LLK FRNPYD
Sbjct: 510 EKLKPKMIQAIDDMLGYEIPELLKKFRNPYD 540


>IMGA|Medtr8g147510.1 EPS15 homology (EH); Dynamin
           chr08_pseudomolecule_IMGAG_V3 36336789-36341831 E
           EGN_Mt090430 20090702
          Length = 542

 Score =  267 bits (683), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 125/151 (82%), Positives = 139/151 (92%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SFNDKP+NE  VGP+G+ELF+KEQ DLLSDL DIP+KACD RINEFVKRAR+AKIHAYI+
Sbjct: 392 SFNDKPINEGFVGPLGQELFKKEQNDLLSDLVDIPRKACDGRINEFVKRARSAKIHAYIV 451

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLK EMPAMMGKAK QQRLID+L DEF KVQREFHLP GDFPN++HFREVLS Y+IDKF
Sbjct: 452 SHLKMEMPAMMGKAKVQQRLIDNLEDEFKKVQREFHLPAGDFPNIDHFREVLSSYSIDKF 511

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPYD 151
           +KLKPKMIQAVDDMLGY+IP+LLK FRNPYD
Sbjct: 512 DKLKPKMIQAVDDMLGYEIPELLKKFRNPYD 542