Jatropha Genome Database

JcCA0317171.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317171.20 + phase: 0 
         (756 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g009090.1 Cobaltochelatase subunit chr05_pseudomolecu...   596   e-170
IMGA|Medtr5g009090.2 AAA ATPase chr05_pseudomolecule_IMGAG_V3 19...   513   e-145
IMGA|Medtr5g009080.1 von Willebrand factor, type A chr05_pseudom...   484   e-137
IMGA|Medtr2g018830.1 Magnesium chelatase, ChlI subunit chr02_pse...   201   8e-52
IMGA|Medtr5g009080.2 Magnesium-chelatase subunit chlD, chloropla...   155   8e-38

>IMGA|Medtr5g009090.1 Cobaltochelatase subunit
           chr05_pseudomolecule_IMGAG_V3 1908806-1895513 E
           EGN_Mt090430 20090702
          Length = 754

 Score =  596 bits (1537), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 305/401 (76%), Positives = 339/401 (84%), Gaps = 17/401 (4%)

Query: 10  FSVTCTPY---QLQSSILLPSVKWYSLLPAFYSFKLAKRPHTRRFSVLASSANATLEPGN 66
           FS+T TP+   QLQ   L  S  + SL      F    R   +R     S      +  N
Sbjct: 3   FSLTQTPHTNLQLQFHSLFSSKPFLSL-----KFHQTCRVQPKR-----SVPKLRAQSEN 52

Query: 67  GAVVAPSE---KLELSSYGRQFFPLAAVVGQDAIKTALLLGAIDREIGGIAISGRRGTAK 123
           GA V  SE   KL+ S+YGRQ+FPLAAVVGQDAIKTALLLGA D  IGGIAISGRRGTAK
Sbjct: 53  GAAVLTSEEEKKLDASNYGRQYFPLAAVVGQDAIKTALLLGATDPRIGGIAISGRRGTAK 112

Query: 124 TVMARGLHAILPPIDVVVGSVANADPSYPEEWEDGLAERA-YDSDGNVKTQVVRSPFVQI 182
           T+MARG+HAILPPI+VV GS+AN+DPS PEEWED LA+R  YDSDGN+KT++V+SPFVQI
Sbjct: 113 TIMARGMHAILPPIEVVEGSIANSDPSCPEEWEDDLAQRVEYDSDGNIKTRIVKSPFVQI 172

Query: 183 PLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLT 242
           PLGVTEDRLIGSVDVEESVKTGTTV+QPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLT
Sbjct: 173 PLGVTEDRLIGSVDVEESVKTGTTVYQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLT 232

Query: 243 EGVNIVEREGISFKHPCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMNFEDRVAAVG 302
           EGVNIVEREGISF+HPC+PLLIATYNP+EG+VREHLLDRIAINLSADLPM+FE+RVAAVG
Sbjct: 233 EGVNIVEREGISFRHPCRPLLIATYNPDEGSVREHLLDRIAINLSADLPMSFENRVAAVG 292

Query: 303 IATQFQERSNEVFQMVVEETEFAKTQVILAREYLKDVTIGREQLKYLVMEALRGGCQGHR 362
           IAT+FQ+   EVF+ V E+T+ AKTQ+ILAREYLKDVTIG+EQLKYLV+EALRGG QGHR
Sbjct: 293 IATEFQDNCGEVFKTVDEDTDNAKTQIILAREYLKDVTIGKEQLKYLVLEALRGGVQGHR 352

Query: 363 AELYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSIVS 403
           AELYAARVAKCLAALEGREKV  DDLKKAVELVILPRSIV+
Sbjct: 353 AELYAARVAKCLAALEGREKVYADDLKKAVELVILPRSIVT 393



 Score =  481 bits (1238), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/305 (81%), Positives = 253/305 (82%), Gaps = 1/305 (0%)

Query: 453 FIFDAEGGLVDEKLLFFXXXXXXXXXXXXXXXNVIFSEDRGRYIKPMLPKGPVKRLAVDA 512
           FIFDAEGGLVDEKLLFF               NVIFSEDRGRYIKPMLPKGPVKRLAVDA
Sbjct: 450 FIFDAEGGLVDEKLLFFAQQAQRRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 509

Query: 513 TLRAAAPYQKLRREKDTQKSRKVFVEXXXXXXXXXXXXXXXLVIFVVDASGSMALNRMQN 572
           TLRAAAPYQKLRREKDT+  RKVFVE               LVIFVVDASGSMALNRMQN
Sbjct: 510 TLRAAAPYQKLRREKDTENRRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQN 569

Query: 573 AKGAALKLLAESYTSRDQVAIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 632
           AKGAALKLLAESYTSRDQV+IIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG
Sbjct: 570 AKGAALKLLAESYTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 629

Query: 633 LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKXXXX-XXXXXXXXXXXXXQELKDEI 691
           LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLK                  QELKDEI
Sbjct: 630 LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKRSTDPEAAAATDAPKPTSQELKDEI 689

Query: 692 LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTKEALS 751
           LEVAGKIYK+GMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAV+S  T+EALS
Sbjct: 690 LEVAGKIYKSGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVVSMATREALS 749

Query: 752 ALKSS 756
           ALKSS
Sbjct: 750 ALKSS 754


>IMGA|Medtr5g009090.2 AAA ATPase chr05_pseudomolecule_IMGAG_V3
           1908806-1901894 E EGN_Mt090430 20090702
          Length = 350

 Score =  513 bits (1321), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/357 (73%), Positives = 297/357 (83%), Gaps = 17/357 (4%)

Query: 10  FSVTCTPY---QLQSSILLPSVKWYSLLPAFYSFKLAKRPHTRRFSVLASSANATLEPGN 66
           FS+T TP+   QLQ   L  S  + SL      F    R   +R     S      +  N
Sbjct: 3   FSLTQTPHTNLQLQFHSLFSSKPFLSL-----KFHQTCRVQPKR-----SVPKLRAQSEN 52

Query: 67  GAVVAPSE---KLELSSYGRQFFPLAAVVGQDAIKTALLLGAIDREIGGIAISGRRGTAK 123
           GA V  SE   KL+ S+YGRQ+FPLAAVVGQDAIKTALLLGA D  IGGIAISGRRGTAK
Sbjct: 53  GAAVLTSEEEKKLDASNYGRQYFPLAAVVGQDAIKTALLLGATDPRIGGIAISGRRGTAK 112

Query: 124 TVMARGLHAILPPIDVVVGSVANADPSYPEEWEDGLAERA-YDSDGNVKTQVVRSPFVQI 182
           T+MARG+HAILPPI+VV GS+AN+DPS PEEWED LA+R  YDSDGN+KT++V+SPFVQI
Sbjct: 113 TIMARGMHAILPPIEVVEGSIANSDPSCPEEWEDDLAQRVEYDSDGNIKTRIVKSPFVQI 172

Query: 183 PLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLT 242
           PLGVTEDRLIGSVDVEESVKTGTTV+QPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLT
Sbjct: 173 PLGVTEDRLIGSVDVEESVKTGTTVYQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLT 232

Query: 243 EGVNIVEREGISFKHPCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMNFEDRVAAVG 302
           EGVNIVEREGISF+HPC+PLLIATYNP+EG+VREHLLDRIAINLSADLPM+FE+RVAAVG
Sbjct: 233 EGVNIVEREGISFRHPCRPLLIATYNPDEGSVREHLLDRIAINLSADLPMSFENRVAAVG 292

Query: 303 IATQFQERSNEVFQMVVEETEFAKTQVILAREYLKDVTIGREQLKYLVMEALRGGCQ 359
           IAT+FQ+   EVF+ V E+T+ AKTQ+ILAREYLKDVTIG+EQLKYLV+EALRGG Q
Sbjct: 293 IATEFQDNCGEVFKTVDEDTDNAKTQIILAREYLKDVTIGKEQLKYLVLEALRGGVQ 349


>IMGA|Medtr5g009080.1 von Willebrand factor, type A
           chr05_pseudomolecule_IMGAG_V3 1901865-1895513 E
           EGN_Mt090430 20090702
          Length = 406

 Score =  484 bits (1245), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/305 (81%), Positives = 253/305 (82%), Gaps = 1/305 (0%)

Query: 453 FIFDAEGGLVDEKLLFFXXXXXXXXXXXXXXXNVIFSEDRGRYIKPMLPKGPVKRLAVDA 512
           FIFDAEGGLVDEKLLFF               NVIFSEDRGRYIKPMLPKGPVKRLAVDA
Sbjct: 102 FIFDAEGGLVDEKLLFFAQQAQRRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDA 161

Query: 513 TLRAAAPYQKLRREKDTQKSRKVFVEXXXXXXXXXXXXXXXLVIFVVDASGSMALNRMQN 572
           TLRAAAPYQKLRREKDT+  RKVFVE               LVIFVVDASGSMALNRMQN
Sbjct: 162 TLRAAAPYQKLRREKDTENRRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQN 221

Query: 573 AKGAALKLLAESYTSRDQVAIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 632
           AKGAALKLLAESYTSRDQV+IIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG
Sbjct: 222 AKGAALKLLAESYTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHG 281

Query: 633 LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKXXXX-XXXXXXXXXXXXXQELKDEI 691
           LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLK                  QELKDEI
Sbjct: 282 LTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKRSTDPEAAAATDAPKPTSQELKDEI 341

Query: 692 LEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTKEALS 751
           LEVAGKIYK+GMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAV+S  T+EALS
Sbjct: 342 LEVAGKIYKSGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVVSMATREALS 401

Query: 752 ALKSS 756
           ALKSS
Sbjct: 402 ALKSS 406



 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 42/44 (95%)

Query: 360 GHRAELYAARVAKCLAALEGREKVNVDDLKKAVELVILPRSIVS 403
           GHRAELYAARVAKCLAALEGREKV  DDLKKAVELVILPRSIV+
Sbjct: 2   GHRAELYAARVAKCLAALEGREKVYADDLKKAVELVILPRSIVT 45


>IMGA|Medtr2g018830.1 Magnesium chelatase, ChlI subunit
           chr02_pseudomolecule_IMGAG_V3 5047276-5044877 F
           EGN_Mt090430 20090702
          Length = 422

 Score =  201 bits (512), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 120/310 (38%), Positives = 176/310 (56%), Gaps = 1/310 (0%)

Query: 83  RQFFPLAAVVGQDAIKTALLLGAIDREIGGIAISGRRGTAKTVMARGLHAILPPIDVVVG 142
           R  +P AA+VGQD +K  LLL  ID +IGG+ I G RGT K+   R L  +LP I VV G
Sbjct: 83  RPVYPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVFG 142

Query: 143 SVANADPSYPEEWEDGLAERAYDSDGNVKTQVVRSPFVQIPLGVTEDRLIGSVDVEESVK 202
              N+DP  PE     + +R    +  +   + +   V +PLG TEDR+ G++D+E+++ 
Sbjct: 143 DPYNSDPEDPEVMGVEVRDRVIKGE-QLSIVLSKINMVDLPLGATEDRVCGTIDIEKALT 201

Query: 203 TGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNIVEREGISFKHPCKPL 262
            G   F+PGLLA+A+RG+LYVDE+NLLD+ + ++LL+    G N VEREGIS  HP + +
Sbjct: 202 EGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFI 261

Query: 263 LIATYNPEEGAVREHLLDRIAINLSADLPMNFEDRVAAVGIATQFQERSNEVFQMVVEET 322
           LI + NPEEG +R  LLDR  ++       + E RV  V    +F +   E  +    E 
Sbjct: 262 LIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRETYKAEQ 321

Query: 323 EFAKTQVILAREYLKDVTIGREQLKYLVMEALRGGCQGHRAELYAARVAKCLAALEGREK 382
           E    Q+  AR+ L  V I ++    +          G R ++ + R AK LAAL+GR++
Sbjct: 322 EKLTDQITSARKILSSVQIDQDLKVKISRVCAELNVDGLRGDIVSNRAAKALAALKGRDQ 381

Query: 383 VNVDDLKKAV 392
           V V+D+   +
Sbjct: 382 VTVEDIATVI 391


>IMGA|Medtr5g009080.2 Magnesium-chelatase subunit chlD, chloroplast
           precursor, putative chr05_pseudomolecule_IMGAG_V3
           1897074-1895386 E EGN_Mt090430 20090702
          Length = 105

 Score =  155 bits (392), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/105 (78%), Positives = 85/105 (80%), Gaps = 1/105 (0%)

Query: 653 MIVAITDGRANISLKXXXXXXXXXXXXXXX-XXQELKDEILEVAGKIYKAGMSLLVIDTE 711
           MIVAITDGRANISLK                  QELKDEILEVAGKIYK+GMSLLVIDTE
Sbjct: 1   MIVAITDGRANISLKRSTDPEAAAATDAPKPTSQELKDEILEVAGKIYKSGMSLLVIDTE 60

Query: 712 NKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTKEALSALKSS 756
           NKFVSTGFAKEIARVAQGKYYYLPNASDAV+S  T+EALSALKSS
Sbjct: 61  NKFVSTGFAKEIARVAQGKYYYLPNASDAVVSMATREALSALKSS 105