Jatropha Genome Database

JcCA0317081.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317081.20 + phase: 0 
         (179 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g084010.1 hypothetical protein chr01_pseudomolecule_I...   148   2e-36

>IMGA|Medtr1g084010.1 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 16771684-16767252 E
           EGN_Mt090430 20090702
          Length = 161

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 109/132 (82%), Gaps = 1/132 (0%)

Query: 49  KKSEGKYGRRKSGAVDFDVLKQHGYKGGMSVLSVPLPKED-TKPDWAWSTGKERREIEAV 107
           KKS+GK  ++KS  +DF+ LK++GYKGG SVL VP PKED +K DW+WS+GKE+R  + V
Sbjct: 30  KKSKGKSTKQKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDSKRDWSWSSGKEKRVEKEV 89

Query: 108 EESYEQRQKTRAALLDAERLTNVQTSKEKKNLSFSQKEKRKRDLGQASRGKNFVEEEKRL 167
           EE+YE+R+KTR AL   E++  V T  +KKNLSFSQKEK+KRDLGQASRGKN+VEEEKRL
Sbjct: 90  EETYEERKKTREALSLGEQMPTVLTRNDKKNLSFSQKEKKKRDLGQASRGKNYVEEEKRL 149

Query: 168 SRESGIYSGFDT 179
            R++G+YSGFD+
Sbjct: 150 LRDNGVYSGFDS 161