Jatropha Genome Database

JcCA0317081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317081.10 - phase: 0 
         (226 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g080080.1 Protein kinase chr07_pseudomolecule_IMGAG_V...    47   9e-06

>IMGA|Medtr7g080080.1 Protein kinase chr07_pseudomolecule_IMGAG_V3
           16822103-16818822 E EGN_Mt090430 20090702
          Length = 363

 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 8/155 (5%)

Query: 15  IKQGAEARVYESTFVGRQSIVK--ERFSKKYRHPSLDSKLTLKRLNAEARCMTKARRLGV 72
           I +GA  +VY+  +V +   +K  +R +      SL++     R   E   M++     +
Sbjct: 51  IGEGAHGKVYQGRYVDQIVAIKVLQRGTTSEERASLEN-----RFAREVNMMSRVHHDNL 105

Query: 73  STPVLYALDPLLHTLTFEYVDGHSVKDIFLEFGLHGVVEERLADIAMQIGDAIGKLHDGG 132
              +    DPL+  +T E + G S++          +      + A+ I  A+  LHD G
Sbjct: 106 VKFIGACKDPLMVIVT-ELLPGMSLRKYLTSIRPKPLDIHVAINFALDIARAMDWLHDNG 164

Query: 133 LIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPE 167
           +IH DL   N+L+      + L DFGL+   ++ E
Sbjct: 165 IIHRDLKPDNLLLTANQKSVKLADFGLAREESVTE 199