Jatropha Genome Database

JcCA0316871.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316871.20 - phase: 0 
         (185 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g093370.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...   140   3e-34
IMGA|Medtr6g093350.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...   135   8e-33
IMGA|Medtr6g093390.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...   105   2e-23
IMGA|Medtr6g093360.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...    69   2e-12
IMGA|Medtr6g092420.1 Phospholipase A2 chr06_pseudomolecule_IMGAG...    68   3e-12
IMGA|Medtr4g160940.1 Phospholipase A2 chr04_pseudomolecule_IMGAG...    65   3e-11

>IMGA|Medtr6g093370.1 Phospholipase A2 chr06_pseudomolecule_IMGAG_V3
           20008110-20010422 E EGN_Mt090430 20090702
          Length = 147

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 5/130 (3%)

Query: 61  LSVLANSPNND-----SQVKCSKTCVAENCNSVGIRYGKYCGVGWTGCPGEKPCDDLDAC 115
           LS+L ++  +D     S   CSK C+AE C+++GI+YGKYCGVG++GCPGEKPCDD+DAC
Sbjct: 18  LSLLFSAAFHDTLADSSSANCSKKCIAELCDTMGIKYGKYCGVGYSGCPGEKPCDDIDAC 77

Query: 116 CKIHDECVEKKGLMSIKCHEXXXXXXXXXXXXXXIGFSRDCTYETAVPTMLQGMDMAILL 175
           C  HD+CV K G+  +KCH+              +GFS++C   T VPTM++GMD+AI+L
Sbjct: 78  CMAHDDCVGKFGMTHVKCHKKFKKCLIRAQKAGKVGFSKECPVSTTVPTMIRGMDLAIML 137

Query: 176 SQLGSPRDEL 185
           S LG    EL
Sbjct: 138 SDLGDNFHEL 147


>IMGA|Medtr6g093350.1 Phospholipase A2 chr06_pseudomolecule_IMGAG_V3
           20000020-20002208 E EGN_Mt090430 20090702
          Length = 166

 Score =  135 bits (341), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 80/110 (72%)

Query: 70  NDSQVKCSKTCVAENCNSVGIRYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKKGLM 129
           + S   CS+TC AE C+++GI+YGKYCGVG+ GCPGEKPCDD+DACC  HDECV++ G+ 
Sbjct: 47  DSSLANCSRTCKAELCDTMGIKYGKYCGVGYWGCPGEKPCDDIDACCMGHDECVDRFGMT 106

Query: 130 SIKCHEXXXXXXXXXXXXXXIGFSRDCTYETAVPTMLQGMDMAILLSQLG 179
            +KCH+              +GFS++C    AVPTM++GMD+AILLS+LG
Sbjct: 107 HVKCHKRLKNCLIREQKANKVGFSKECPANVAVPTMIKGMDLAILLSELG 156


>IMGA|Medtr6g093390.1 Phospholipase A2 chr06_pseudomolecule_IMGAG_V3
           20014226-20014798 E EGN_Mt090430 20090702
          Length = 98

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 62/90 (68%)

Query: 90  IRYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKKGLMSIKCHEXXXXXXXXXXXXXX 149
           I+YG+YCGVG++GCPG KPCDD+DACC  HD+CV + G+  +KCH+              
Sbjct: 3   IKYGRYCGVGYSGCPGVKPCDDIDACCMGHDDCVGRFGVTHVKCHKRLKNCLIRVQRAGK 62

Query: 150 IGFSRDCTYETAVPTMLQGMDMAILLSQLG 179
           +GFS++C    A PTM++GMD+AI+ S +G
Sbjct: 63  VGFSKECPVSIAAPTMIRGMDLAIMFSSIG 92


>IMGA|Medtr6g093360.1 Phospholipase A2 chr06_pseudomolecule_IMGAG_V3
           20005717-20006762 E EGN_Mt090430 20090702
          Length = 98

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 37/60 (61%)

Query: 95  YCGVGWTGCPGEKPCDDLDACCKIHDECVEKKGLMSIKCHEXXXXXXXXXXXXXXIGFSR 154
           YCG+ +TGCP EKPCD +DACC  HD+CV K G+ ++KCH+               GFSR
Sbjct: 36  YCGIRYTGCPDEKPCDHIDACCIAHDDCVGKFGMTNVKCHKKFKNCLVKKRKAGKFGFSR 95


>IMGA|Medtr6g092420.1 Phospholipase A2 chr06_pseudomolecule_IMGAG_V3
           19431398-19434044 E EGN_Mt090430 20090702
          Length = 157

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)

Query: 75  KCSKTCVAENCNSVGI-RYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKK 126
           +CS+ C +  C+   + RYGKYCG+ ++GCPGEKPCD LDACC  HD+CV  K
Sbjct: 46  ECSRQCESSFCSVPPLLRYGKYCGLLYSGCPGEKPCDGLDACCMKHDQCVTVK 98


>IMGA|Medtr4g160940.1 Phospholipase A2 chr04_pseudomolecule_IMGAG_V3
           40937290-40936185 E EGN_Mt090430 20090702
          Length = 158

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 76  CSKTCVAENCNSVGI-RYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKK 126
           CS+ C +  C+   +  YGKYCG+ ++GCPGE PCDDLD CC  HD CV+ K
Sbjct: 39  CSRKCESNFCSVPPLLSYGKYCGINYSGCPGETPCDDLDTCCMNHDLCVKAK 90