Jatropha Genome Database

JcCA0316521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316521.10 + phase: 0 /pseudo/partial
         (207 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g159920.1 6-phosphogluconate dehydrogenase, NAD-bindi...   118   2e-27
IMGA|Medtr4g137510.1 Sugar transporter superfamily; 6-phosphoglu...    82   1e-16

>IMGA|Medtr4g159920.1 6-phosphogluconate dehydrogenase, NAD-binding;
           6-phosphogluconate dehydrogenase, C-terminal-like;
           chr04_pseudomolecule_IMGAG_V3 40434801-40435960 E
           EGN_Mt090430 20090702
          Length = 308

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 103/195 (52%), Gaps = 17/195 (8%)

Query: 22  NTEFVSLSNTRIGSIDIRVMGRSVYAHL--AGYTHRLHSDPLXRPTSRSHWGQPC-SISY 78
            +E ++ SNTR+G I   VMG+S+ AHL  +GYT  + +    R  S++   QP   I  
Sbjct: 3   TSEPITPSNTRLGWIGTGVMGQSMCAHLIRSGYTLTVFN----RTPSKA---QPLLDIGA 55

Query: 79  CRCLSIXCHFFHRRLSFPHPSSPTGF-------XXXXXXXXXXXXXXCCMTTFDPFLASE 131
               S         + F     P+                         MTT DP LA E
Sbjct: 56  TLATSPHAVASQSDVVFSIVGYPSDVRSVLLDPNTGALAGLKSGGILVDMTTSDPSLAVE 115

Query: 132 ISDVAFAKNYHSIDAPVSRGDRGDKNKTHAIFAGGDKVVIDRLNPLFVLMGKVNYMGAPG 191
           I+D A  K+ HSIDAPVS GDRG KN T AIFAGGD+ ++ +L+PLF  +GKVNYMG  G
Sbjct: 116 IADAASVKSCHSIDAPVSGGDRGAKNGTLAIFAGGDESIVKKLSPLFSSLGKVNYMGTSG 175

Query: 192 KGQLAKLTNQIAISS 206
           KGQ  KL NQI I+S
Sbjct: 176 KGQFVKLANQITIAS 190


>IMGA|Medtr4g137510.1 Sugar transporter superfamily;
           6-phosphogluconate dehydrogenase, NAD-binding;
           Phosphate-induced protein 1 conserved region;
           6-phosphogluconate dehydrogenase, C-terminal-like;
           chr04_pseudomolecule_IMGAG_V3 33883043-33880390 E
           EGN_Mt090430 20090702
          Length = 361

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 86/186 (46%), Gaps = 4/186 (2%)

Query: 26  VSLSNTRIGSIDIRVMGRSVYAHL--AGYTHRLHSDPLXRPTSRSHWGQPCSISYCRC-L 82
           ++ S TRIG I I VMG ++ + L  AGYT   ++     P S S       ++     L
Sbjct: 9   ITTSTTRIGWIGIGVMGGAMASRLISAGYTLTFYARNPSHPNSLSLQSLGAKLANSPSHL 68

Query: 83  SIXCHFFHRRLSFPHPSSPTGFXXXXXXXXXXXXXXCCMTTFD-PFLASEISDVAFAKNY 141
           +         L  P                         TT   P LA EIS  A AK+ 
Sbjct: 69  ANSSDVVFTMLGHPSDVKSIYLDKNGVVSSLNPNTVTVDTTSSHPDLAKEISVAARAKSA 128

Query: 142 HSIDAPVSRGDRGDKNKTHAIFAGGDKVVIDRLNPLFVLMGKVNYMGAPGKGQLAKLTNQ 201
            SIDAPVS GD G ++   AIFA G+  V++ L PLF +MGK  Y+G  G GQ  K+ NQ
Sbjct: 129 WSIDAPVSGGDIGARDGKLAIFAAGEAAVVEWLQPLFEIMGKATYLGPAGCGQSCKIANQ 188

Query: 202 IAISSH 207
           I I ++
Sbjct: 189 ITIGAN 194