Jatropha Genome Database

JcCA0316161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316161.10 + phase: 0 
         (246 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g116710.1 Glycosyl transferase, family 2 chr02_pseudo...   400   e-112
IMGA|Medtr7g027050.1 Glycosyl transferase, family 2 chr07_pseudo...    66   2e-11

>IMGA|Medtr2g116710.1 Glycosyl transferase, family 2
           chr02_pseudomolecule_IMGAG_V3 27284905-27280488 E
           EGN_Mt090430 20090702
          Length = 244

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/249 (79%), Positives = 217/249 (87%), Gaps = 17/249 (6%)

Query: 2   EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61
           +KNKYSII+P YNERLNI+LI+YLIFKHL DVDFE+IVVDDGSPDGTQ+VVKQLQQVYGE
Sbjct: 9   KKNKYSIIVPIYNERLNISLILYLIFKHLPDVDFEVIVVDDGSPDGTQDVVKQLQQVYGE 68

Query: 62  DRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 121
           DRILLR RP+K+GLGTAY+HG+KHASGNFVVIMDADLSHHPKYLP FI+KQLETGA IVT
Sbjct: 69  DRILLRARPRKMGLGTAYIHGMKHASGNFVVIMDADLSHHPKYLPGFIRKQLETGADIVT 128

Query: 122 GTRYVKGGGVHGWNLMRKLTSRGANVLAHTLLWPGVSDLTGSFRLYKKSVLEDIISSVVS 181
           GTRYVKGGGVH WNLMRKLTSRGANVLA TLLWPGVSDLTGSFRLY+K+VLEDIIS  VS
Sbjct: 129 GTRYVKGGGVHRWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYRKTVLEDIISCCVS 188

Query: 182 KGYVFQMEMIVRASRKGYHIEEPLARLFFTGSKLLLLIEFLE----VPKLGGSEIVEYLK 237
           KG VFQMEMIVRASRKGYHI+E             + I F++      KLGGSEIVEYLK
Sbjct: 189 KGSVFQMEMIVRASRKGYHIKE-------------VPITFVDRVYGSSKLGGSEIVEYLK 235

Query: 238 GLAYLLVTT 246
           GL YLL+TT
Sbjct: 236 GLVYLLMTT 244


>IMGA|Medtr7g027050.1 Glycosyl transferase, family 2
           chr07_pseudomolecule_IMGAG_V3 7025648-7019557 F
           EGN_Mt090430 20090702
          Length = 330

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 27/215 (12%)

Query: 4   NKY-SIIIPTYNE--RLNIAL---IVYLIFKHLRDVDF--EIIVVDDGSPDGTQEVVKQL 55
           +KY S+IIP YNE  RL  AL   ++YL  +  +D  F  E+++VDDGS DGT+ V  + 
Sbjct: 61  SKYISLIIPAYNEEHRLPGALEETMIYLQHRASKDPSFSYEVVIVDDGSVDGTKRVAFEF 120

Query: 56  QQVYGEDRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDA-------DLSHHPKYLPSF 108
            + Y  D++ +    +  G G A   G+ H+ G  ++++DA       DL      + + 
Sbjct: 121 VRKYTVDKVRVILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKITDLEKLENQIRAV 180

Query: 109 IKK-----------QLETGASIVTGTR-YVKGGGVHGWNLMRKLTSRGANVLAHTLLWPG 156
            KK           ++     +V G+R +++   +      R    +G +++      PG
Sbjct: 181 AKKDGDSSGSDSSFRMSDTPVVVFGSRAHLEEKALATRKWYRNFLMKGFHLVVLLAAGPG 240

Query: 157 VSDLTGSFRLYKKSVLEDIISSVVSKGYVFQMEMI 191
           + D    F+++ ++    + S+V  K + F +E++
Sbjct: 241 IRDTQCGFKMFTRAAARKLFSNVRLKRWCFDVELV 275