Jatropha Genome Database

JcCA0316141.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316141.30 - phase: 1 /partial
         (243 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g079260.1 Transketolase, C-terminal-like chr08_pseudo...   412   e-116
IMGA|Medtr8g079280.1 Transketolase, C-terminal-like chr08_pseudo...   405   e-113
IMGA|Medtr8g139810.1 Transketolase, C-terminal-like chr08_pseudo...   362   e-101
IMGA|Medtr8g139810.2 Transketolase, C-terminal chr08_pseudomolec...   362   e-101
IMGA|Medtr2g025670.1 Transketolase, C-terminal-like chr02_pseudo...   360   e-100
IMGA|Medtr3g136470.1 Transketolase, C-terminal chr03_pseudomolec...   317   4e-87
IMGA|Medtr7g005080.1 Bacterial transketolase chr07_pseudomolecul...    50   1e-06

>IMGA|Medtr8g079260.1 Transketolase, C-terminal-like
           chr08_pseudomolecule_IMGAG_V3 16467658-16470719 E
           EGN_Mt090430 20090702
          Length = 521

 Score =  412 bits (1059), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/240 (82%), Positives = 217/240 (90%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRFA+DRAGLVGADGPTHCGAFDIT+MACLPNM+VMAPSDEAEL++
Sbjct: 282 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMN 341

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAAAIDDRPSCFRFPRGNGIGA LP NNKGTPLEIGKGRIL+EG+ VAILGYG +V+
Sbjct: 342 MVATAAAIDDRPSCFRFPRGNGIGANLPLNNKGTPLEIGKGRILLEGSRVAILGYGCMVQ 401

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
           QC++AA  LR   + VTVADARFCKPLDTDLIR L REHEILITVEEGSIGGF SHVS F
Sbjct: 402 QCMKAAEMLRAVGVYVTVADARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQF 461

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQFK 243
           LSL+G+LDG LKLRSM+LPDRYIDHG+P DQI EAGLSS HI ATVLSLL  PKEAL FK
Sbjct: 462 LSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLDMPKEALLFK 521


>IMGA|Medtr8g079280.1 Transketolase, C-terminal-like
           chr08_pseudomolecule_IMGAG_V3 16474372-16479140 E
           EGN_Mt090430 20090702
          Length = 736

 Score =  405 bits (1041), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/239 (82%), Positives = 216/239 (90%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRFA+DRAGLVGADGPTHCGAFDIT+MACLPNM+VMAPSDEAEL++
Sbjct: 498 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMN 557

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAAAIDDRPSCFRFPRGNGIGA LP +NKGTPLEIGKGRIL+EG+ VAILGYG +V+
Sbjct: 558 MVATAAAIDDRPSCFRFPRGNGIGADLPLHNKGTPLEIGKGRILLEGSRVAILGYGCMVQ 617

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
           QC++AA  LR   + VTV+DARFCKPLDTDLIR L REHEILITVEEGSIGGF SHVS F
Sbjct: 618 QCMKAAEMLRAVGVYVTVSDARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQF 677

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQF 242
           LSL+G+LDG LKLRSM+LPDRYIDHG+P DQI EAGLSS HI ATVLSLL  PKEAL F
Sbjct: 678 LSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLEMPKEALFF 736


>IMGA|Medtr8g139810.1 Transketolase, C-terminal-like
           chr08_pseudomolecule_IMGAG_V3 34207700-34203435 F
           EGN_Mt090430 20090702
          Length = 717

 Score =  362 bits (930), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/238 (71%), Positives = 202/238 (84%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRFA+DRAGLVG+DGPTH G+FD+T+MACLPNMVVMAPSDEAEL H
Sbjct: 477 YDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEAELCH 536

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAAAIDDRPSCFR+PRGNGIG  LP   KG PLEIGKGRIL+EG  VA+LGYGS V+
Sbjct: 537 MVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYGSAVQ 596

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
            C+ AA+ +    + +TVADARFCKPLD  LIR L + HE+LITVEEGSIGGF SHV+ F
Sbjct: 597 NCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHVAQF 656

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQ 241
           ++L G+LDG+LK R +VLPDRYIDHGSP DQ+  AGL+ +HIAATV ++LG+ +EAL+
Sbjct: 657 MALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREALE 714


>IMGA|Medtr8g139810.2 Transketolase, C-terminal
           chr08_pseudomolecule_IMGAG_V3 34207700-34203435 F
           EGN_Mt090430 20090702
          Length = 672

 Score =  362 bits (929), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/238 (71%), Positives = 202/238 (84%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRFA+DRAGLVG+DGPTH G+FD+T+MACLPNMVVMAPSDEAEL H
Sbjct: 432 YDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEAELCH 491

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAAAIDDRPSCFR+PRGNGIG  LP   KG PLEIGKGRIL+EG  VA+LGYGS V+
Sbjct: 492 MVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYGSAVQ 551

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
            C+ AA+ +    + +TVADARFCKPLD  LIR L + HE+LITVEEGSIGGF SHV+ F
Sbjct: 552 NCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHVAQF 611

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQ 241
           ++L G+LDG+LK R +VLPDRYIDHGSP DQ+  AGL+ +HIAATV ++LG+ +EAL+
Sbjct: 612 MALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREALE 669


>IMGA|Medtr2g025670.1 Transketolase, C-terminal-like
           chr02_pseudomolecule_IMGAG_V3 6849349-6842295 E
           EGN_Mt090430 20090702
          Length = 718

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 165/238 (69%), Positives = 198/238 (83%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVDLQKLPVRF +D+AG VG DGPTHCG+FD+TYMACLPNMVVMAPSDEAE++H
Sbjct: 475 YDQVVHDVDLQKLPVRFVIDKAGFVGEDGPTHCGSFDVTYMACLPNMVVMAPSDEAEIIH 534

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATA AI+DRPSCFRFPR NG G  LPP N+G P+EIGKGRIL+EG  VA+LG+G+ V+
Sbjct: 535 MVATAVAINDRPSCFRFPRANGTGVELPPGNRGIPMEIGKGRILIEGERVALLGFGTAVQ 594

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
            CV AA+ L    + VTVADARFCKPLD  LIR L + HE+LITVEEGSIGGF SHV+ F
Sbjct: 595 NCVAAASMLEDHGLRVTVADARFCKPLDHSLIRSLAKSHEVLITVEEGSIGGFGSHVAQF 654

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQ 241
           ++L G+LDG LK R MV PD YIDHGSP +Q+  AGL+S+HIAATV ++LG+ +EAL+
Sbjct: 655 MALDGLLDGKLKWRPMVFPDIYIDHGSPAEQLAVAGLTSSHIAATVFNILGQTREALE 712


>IMGA|Medtr3g136470.1 Transketolase, C-terminal
           chr03_pseudomolecule_IMGAG_V3 34445680-34451497 E
           EGN_Mt090430 20090702
          Length = 707

 Score =  317 bits (811), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 151/239 (63%), Positives = 189/239 (79%), Gaps = 1/239 (0%)

Query: 4   WTKVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVH 63
           + +VVHDVD QK+PVRF +  AGLVG+DGP  CGAFDIT+M+CLPNM+VMAPSDEAELVH
Sbjct: 467 YDQVVHDVDQQKVPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEAELVH 526

Query: 64  MVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVR 123
           MVATAA I+D+P CFR+PRG  +G      + G P+EIGKGRIL+EG  VA+LGYGS+V+
Sbjct: 527 MVATAAHINDQPVCFRYPRGALVGKDEAILD-GIPIEIGKGRILVEGKDVALLGYGSMVQ 585

Query: 124 QCVEAANKLRTRDISVTVADARFCKPLDTDLIRRLTREHEILITVEEGSIGGFCSHVSHF 183
            C++A + L    I VTVADARFCKPLD +L+R+L + H  LITVEEGSIGGF SHV+ F
Sbjct: 586 NCLKAYSLLANLGIEVTVADARFCKPLDIELLRQLCKHHSFLITVEEGSIGGFGSHVAQF 645

Query: 184 LSLSGILDGDLKLRSMVLPDRYIDHGSPQDQIQEAGLSSNHIAATVLSLLGKPKEALQF 242
           ++L G+LD  +K R +VLPD YI+H SP  Q+ +AGL+ +HIAAT LSLLG+ +EAL F
Sbjct: 646 IALDGLLDRRIKWRPIVLPDSYIEHASPNQQLNQAGLTGHHIAATALSLLGRTREALSF 704


>IMGA|Medtr7g005080.1 Bacterial transketolase
           chr07_pseudomolecule_IMGAG_V3 167775-175471 E
           EGN_Mt090430 20090702
          Length = 361

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 5/149 (3%)

Query: 26  GLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELVHMVATAAAIDDRPSCF---RFPR 82
           G     G  H   +   Y +C P + V+AP   +E    +  AA  D  P  F       
Sbjct: 144 GAAAGVGAQHSHCYASWYGSC-PGLKVLAPYS-SEDARGLLKAAIRDPDPVVFLENELLY 201

Query: 83  GNGIGAALPPNNKGTPLEIGKGRILMEGNSVAILGYGSIVRQCVEAANKLRTRDISVTVA 142
           G     +    +    L IGK +I  EG  V I  +  +V   ++AA  L    IS  V 
Sbjct: 202 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKMVGFALKAAETLEKEGISAEVI 261

Query: 143 DARFCKPLDTDLIRRLTREHEILITVEEG 171
           + R  +PLD   I    R+   L+TVEEG
Sbjct: 262 NLRSIRPLDRATINASVRKTNRLVTVEEG 290