Jatropha Genome Database
- JcCA0316141.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0316141.10 + phase: 0 /pseudo/partial
(651 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g009690.1 KH, type 1 chr02_pseudomolecule_IMGAG_V3 21... 98 2e-20
IMGA|Medtr5g033090.1 KH, type 1 chr05_pseudomolecule_IMGAG_V3 13... 96 4e-20
IMGA|Medtr4g121220.1 KH, type 1 chr04_pseudomolecule_IMGAG_V3 28... 92 7e-19
IMGA|AC174330_11.1 KH, type 1 AC174330.20 72313-74150 E EGN_Mt09... 91 2e-18
IMGA|Medtr3g127960.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3 32... 70 3e-12
IMGA|Medtr2g024360.1 KH, type 1 chr02_pseudomolecule_IMGAG_V3 61... 69 5e-12
IMGA|Medtr3g123610.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3 31... 57 3e-08
IMGA|Medtr7g010360.1 KH, type 1 chr07_pseudomolecule_IMGAG_V3 22... 55 8e-08
IMGA|Medtr5g032960.1 hypothetical protein chr05_pseudomolecule_I... 55 1e-07
IMGA|Medtr5g033000.1 hypothetical protein chr05_pseudomolecule_I... 55 2e-07
IMGA|Medtr5g032930.1 hypothetical protein chr05_pseudomolecule_I... 53 6e-07
IMGA|Medtr6g013130.1 KH, type 1 chr06_pseudomolecule_IMGAG_V3 26... 52 1e-06
IMGA|Medtr6g013130.2 KH, type 1 chr06_pseudomolecule_IMGAG_V3 26... 52 1e-06
>IMGA|Medtr2g009690.1 KH, type 1 chr02_pseudomolecule_IMGAG_V3
2180637-2187804 E EGN_Mt090430 20090702
Length = 767
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 562 RSMELESSCSRKRSNVANSVVELLVSEDIIGSVFGEDGGNLTRLRQISGAKVEVCDPSPG 621
R LE K + V N+ +E++V ED + V+GE+G NL RLRQISGAKV + +P PG
Sbjct: 676 RKGGLELVSGSKSAIVTNTTIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPG 735
Query: 622 KNDRTVVISGTPDQTRAAQSLFQAFIL 648
+DRT+V+SG+PD+T+AAQSL QAFIL
Sbjct: 736 TSDRTIVLSGSPDETQAAQSLLQAFIL 762
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 69/97 (71%)
Query: 285 RSIEHEIEKGHPSVLIEGTSVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGE 344
RS+E IEKG S L G+SVTA+L+V S+ V CL G GG I S+ + +GA I+I+ +
Sbjct: 403 RSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGTD 462
Query: 345 QNSDCASENDVVIEITGEYKNVQNALFLVTRKLRDTL 381
+ S CAS+ND V++I+GE+ NVQ+AL+ T +LRD L
Sbjct: 463 KVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNL 499
>IMGA|Medtr5g033090.1 KH, type 1 chr05_pseudomolecule_IMGAG_V3
13482794-13476748 E EGN_Mt090430 20090702
Length = 596
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 575 SNVANSVVELLVSEDIIGSVFGEDGGNLTRLRQISGAKVEVCDPSP-GKNDRTVVISGTP 633
+ V N+ VE++VSE + GSV+GEDGGNL R+RQISGA V V DPS G + VVISGTP
Sbjct: 517 ATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVVISGTP 576
Query: 634 DQTRAAQSLFQAFILAYQ 651
DQT AAQSL QAFI Q
Sbjct: 577 DQTFAAQSLLQAFIQTAQ 594
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Query: 285 RSIEHEIEKG-HPSVLIEGTSVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEG 343
R E I G P+ +E + VTARLL+ + + L GN G++ S+ + SGADIQ+L G
Sbjct: 347 RIAEDHIRNGFQPATAVE-SPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHG 405
Query: 344 EQNSDCASENDVVIEITGEYKNVQNALFLVTRKLRDTLVPSELLDEAKLR 393
E + AS+NDVV++ITG Y+ V+NAL +T +RD + +ELL EAK++
Sbjct: 406 EPIPN-ASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNELLAEAKIK 454
>IMGA|Medtr4g121220.1 KH, type 1 chr04_pseudomolecule_IMGAG_V3
28348757-28355344 E EGN_Mt090430 20090702
Length = 616
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 577 VANSVVELLVSEDIIGSVFGEDGGNLTRLRQISGAKVEVCDPSPGKNDRT-VVISGTPDQ 635
+ N+ VE+++ DIIGSV+GE+G NL +LRQISGAKV +P PG +DR +V+SGTPD+
Sbjct: 540 ITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGAKVVFHEPRPGTSDRAKIVLSGTPDE 599
Query: 636 TRAAQSLFQAFIL 648
T+AAQSL QA+IL
Sbjct: 600 TQAAQSLLQAYIL 612
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%)
Query: 285 RSIEHEIEKGHPSVLIEGTSVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGE 344
RSIE IEK + +SVTA+L+V S+ V L G GG I S+ + + I+I
Sbjct: 338 RSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNG 397
Query: 345 QNSDCASENDVVIEITGEYKNVQNALFLVTRKLRDTL 381
+ CAS ND V++I+GE NV++AL+ TR+LRD +
Sbjct: 398 EVPKCASFNDQVVQISGELPNVRDALYNATRRLRDHI 434
>IMGA|AC174330_11.1 KH, type 1 AC174330.20 72313-74150 E
EGN_Mt090430 20090702
Length = 173
Score = 90.5 bits (223), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 575 SNVANSVVELLVSEDIIGSVFGEDGGNLTRLRQISGAKVEVCDPSP-GKNDRTVVISGTP 633
+ V N+ VE++VSE + GSV+GEDGGNL R+RQISGA V V DPS G + VVISGTP
Sbjct: 100 ATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVVISGTP 159
Query: 634 DQTRAAQSLFQA 645
DQT AAQSL QA
Sbjct: 160 DQTFAAQSLLQA 171
>IMGA|Medtr3g127960.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3
32655203-32650880 E EGN_Mt090430 20090702
Length = 662
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 51/73 (69%)
Query: 577 VANSVVELLVSEDIIGSVFGEDGGNLTRLRQISGAKVEVCDPSPGKNDRTVVISGTPDQT 636
+ ++ VE++V ++ ++GE+G L ++ QIS A V + DP PG + ++ISGTP+QT
Sbjct: 585 ITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPGAVETKIIISGTPEQT 644
Query: 637 RAAQSLFQAFILA 649
AAQSL QAF+++
Sbjct: 645 NAAQSLIQAFVMS 657
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 304 SVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITGEY 363
S+ AR++V S + CL G GG I ++ SGA I++L ++ C SE+D VI+++G
Sbjct: 396 SMLARVIVSSKHIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVI 455
Query: 364 KNVQNALFLVTRKLRDTL 381
+ V +AL +T +LR+
Sbjct: 456 EAVHDALLQITTRLRNNF 473
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 308 RLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITGEYKNVQ 367
RLL+ S+ V C+ G GG + + + SGA I+IL E+ CAS++D +++ITG + V+
Sbjct: 168 RLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVR 227
Query: 368 NALFLVTRKL 377
AL V ++L
Sbjct: 228 RALQSVFQQL 237
>IMGA|Medtr2g024360.1 KH, type 1 chr02_pseudomolecule_IMGAG_V3
6144546-6137927 E EGN_Mt090430 20090702
Length = 632
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 142/352 (40%), Gaps = 46/352 (13%)
Query: 308 RLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITGEYKNVQ 367
R+L SD + L G GG + + SGA I++ + + D E T + K+V
Sbjct: 316 RMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSDLKSVA 375
Query: 368 -NALFLVTRKLRDT---------LVPSELLDEAKLRSPNGRVVEVASPRXXXXXXXXXXX 417
A+ L+ K+ D LVPS+++ RS G ++ R
Sbjct: 376 VEAVLLLQEKINDEDDAPVSIRLLVPSKVIGCIIGRS--GAIINEIRKRTKADIQIS--- 430
Query: 418 XREASLTSAMDQLGFSNSLCNASSLRLQLTQKFGKGSSAAIKNNENSSTAFVGGSELERS 477
R A D + +R L Q + +KN + +G L S
Sbjct: 431 -RSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNKDIDHNRHIGSESLYAS 489
Query: 478 LHFLLPKEVLNEVGAKSPSGVRETACLELDLSIGQASGPMKVGATSPSLHMPPFMLFFVI 537
L +L+ + A +P+ L D G +G L
Sbjct: 490 SSVLSAPPMLSSIPATAPA-------LAYDQRTGSGTG-----------------LGMHS 525
Query: 538 ALSNWMYITWVHLQTVERSSKMFGRSMELESSCSRKRSNVANSVVELLVSEDIIGSVFGE 597
+ S++ Y ++ ++E + +G ++ S +E++V + +G V G+
Sbjct: 526 SRSHYGYDSY----SMEDNG--YGSMSSYATNLYEGHRLPPLSTLEMVVPANAVGKVMGK 579
Query: 598 DGGNLTRLRQISGAKVEVCDPSPGKNDRTVVISGTPDQTRAAQSLFQAFILA 649
G NL +R+ISGA VE+ + + DR +ISGT ++ RAA++L QAFI+A
Sbjct: 580 GGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAAENLIQAFIMA 631
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 305 VTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITGEYK 364
V+ RLLV S V+ C+ G G I ++ + + ADIQI + A +ND ++E+ GE
Sbjct: 394 VSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQISRSNK-PKYADDNDELVEVVGEVD 452
Query: 365 NVQNALFLVTRKLRDTLVPSELLD 388
V++AL + +LR+ ++ ++ +D
Sbjct: 453 CVRDALIQIVLRLREDVLKNKDID 476
>IMGA|Medtr3g123610.1 KH, type 1 chr03_pseudomolecule_IMGAG_V3
31119624-31123691 E EGN_Mt090430 20090702
Length = 646
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 558 KMFGRSMELESSCSRKRSNVANSVVELLVSEDIIGSVFGEDGGNLTRLRQISGAKVEVCD 617
K R +L + +R S V S++E+++ E + + + L ++ ++SGA V++ +
Sbjct: 549 KESDRRDDLPTGLNRTVSLVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGANVKLVE 608
Query: 618 PSPGKNDRTVVISGTPDQTRAAQSLFQAFILAYQ 651
P + ++ + ISGTP+Q QSL Q FIL+ Q
Sbjct: 609 DRPDEKEKIIQISGTPEQAERGQSLLQGFILSTQ 642
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 305 VTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITGEYK 364
+T RL+V S + CL+G + S+ +GA +QIL E+ C + D +++I GE +
Sbjct: 412 ITTRLIVPSSDIECLDGKNASL-SEIERSTGASVQILPREELPPCIANTDELVQIVGEIE 470
Query: 365 NVQNALFLVTRKLR----------DTLVPSELLDEAKLRSPN--GRVVEVAS 404
+N + VT KLR DT+ PS L + S N V E A+
Sbjct: 471 AARNVILDVTAKLRSYVYRDILQWDTVPPSAPLPSVEASSSNSMATVAETAT 522
>IMGA|Medtr7g010360.1 KH, type 1 chr07_pseudomolecule_IMGAG_V3
2221145-2226736 E EGN_Mt090430 20090702
Length = 571
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 302 GTSVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITG 361
G VTA+LLV SD + C+ G GG+I +GA I+IL+ ++ CA +D +++I+G
Sbjct: 150 GDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISG 209
Query: 362 EYKNVQNALFLVTRKLRD 379
E V+ AL V +L D
Sbjct: 210 EIAVVKKALIQVAARLHD 227
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 304 SVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITGEY 363
S T+RLLV S + CL G GG I ++ + A+I+IL E A+E+D +++I+GE
Sbjct: 381 SFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGEL 440
Query: 364 KNVQNALFLVTRKLRDTLVPSE 385
++AL V +LR L E
Sbjct: 441 DIAKDALLQVLTRLRANLFDKE 462
>IMGA|Medtr5g032960.1 hypothetical protein
chr05_pseudomolecule_IMGAG_V3 13410120-13409667 E
EGN_Mt090430 20090702
Length = 57
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/46 (67%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 607 QISGAKVEVCDPSP-GKNDRTVVISGTPDQTRAAQSLFQAFILAYQ 651
QISGA V V DPS G + VVISGTPDQT AAQSL QAFI Q
Sbjct: 10 QISGADVTVFDPSSTGTSGGKVVISGTPDQTFAAQSLLQAFIQTAQ 55
>IMGA|Medtr5g033000.1 hypothetical protein
chr05_pseudomolecule_IMGAG_V3 13427154-13425287 E
EGN_Mt090430 20090702
Length = 63
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/46 (67%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 607 QISGAKVEVCDPS-PGKNDRTVVISGTPDQTRAAQSLFQAFILAYQ 651
QISGA V V DPS G + VVISGTPDQT AAQSL QAFI Q
Sbjct: 16 QISGADVTVFDPSNTGTSGGKVVISGTPDQTFAAQSLLQAFIQTAQ 61
>IMGA|Medtr5g032930.1 hypothetical protein
chr05_pseudomolecule_IMGAG_V3 13392510-13390268 E
EGN_Mt090430 20090702
Length = 103
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 31/43 (72%)
Query: 607 QISGAKVEVCDPSPGKNDRTVVISGTPDQTRAAQSLFQAFILA 649
+IS AKV V PS G++ VVISG PDQT AAQSL QAFI A
Sbjct: 37 RISNAKVTVYGPSVGRSGGNVVISGMPDQTFAAQSLLQAFIQA 79
>IMGA|Medtr6g013130.1 KH, type 1 chr06_pseudomolecule_IMGAG_V3
2675311-2680501 E EGN_Mt090430 20090702
Length = 553
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 302 GTSVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITG 361
G V A+LLV SD + C+ G GG+I +GA I+IL+ + CA +D +++I+G
Sbjct: 141 GPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISG 200
Query: 362 EYKNVQNALFLVTRKL 377
+ V+ AL + +L
Sbjct: 201 DAAVVKKALHQIASRL 216
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 304 SVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITGEY 363
S T RLLV S + CL G GG I ++ + ++I+IL E AS++D +++I+G+
Sbjct: 373 SFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDL 432
Query: 364 KNVQNALFLVTRKLRDTLVPSE 385
++AL V +LR L E
Sbjct: 433 DVAKDALVQVLTRLRANLFDRE 454
>IMGA|Medtr6g013130.2 KH, type 1 chr06_pseudomolecule_IMGAG_V3
2675311-2680501 E EGN_Mt090430 20090702
Length = 538
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 302 GTSVTARLLVESDVVCCLNGNGGEIDSKFTEGSGADIQILEGEQNSDCASENDVVIEITG 361
G V A+LLV SD + C+ G GG+I +GA I+IL+ + CA +D +++I+G
Sbjct: 141 GPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISG 200
Query: 362 EYKNVQNALFLVTRKL 377
+ V+ AL + +L
Sbjct: 201 DAAVVKKALHQIASRL 216