Jatropha Genome Database

JcCA0315581.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315581.30 - phase: 0 /TE/partial
         (333 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g080870.1 Peptidase aspartic, catalytic chr02_pseudom...   149   2e-36
IMGA|Medtr5g028970.1 hypothetical protein chr05_pseudomolecule_I...    60   1e-09
IMGA|Medtr7g040530.1 hypothetical protein chr07_pseudomolecule_I...    52   4e-07
IMGA|Medtr5g039360.1 hypothetical protein chr05_pseudomolecule_I...    50   2e-06

>IMGA|Medtr2g080870.1 Peptidase aspartic, catalytic
           chr02_pseudomolecule_IMGAG_V3 18773924-18773065 H
           EGN_Mt090430 20090702
          Length = 229

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 97/135 (71%)

Query: 187 KLPPKLKDPRSFSIPCNIGNLDFEKALADLGAGINLMSYGVFKMLGMGELKPTMMSLQLV 246
           ++P K  DP SF+IPC+IGNL+  KAL DLG  INL+   + K LG   +K   M+L LV
Sbjct: 61  RIPQKKTDPGSFTIPCSIGNLNINKALCDLGTSINLIPLSMMKKLGNLVVKLARMTLSLV 120

Query: 247 DRSIKYPRGIVEDVLVKVGTFIFPVDFVILDIDEDREGSLILGRPFLATARALIDVYEGK 306
           D SIK+P  +VEDVLVKVG F+FPVDFVI+D+ ED +  L+LGRPFLAT RA+ID+  G+
Sbjct: 121 DCSIKHPFTVVEDVLVKVGRFVFPVDFVIMDMKEDNDCPLLLGRPFLATGRAMIDMDVGE 180

Query: 307 LTLRVGQEEIIFDVL 321
           + LR+  E I F+V 
Sbjct: 181 VMLRIKDEHIEFNVF 195


>IMGA|Medtr5g028970.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 11987719-11990018 E
           EGN_Mt090430 20090702
          Length = 102

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 234 GELKPTMMSLQLVDRSIKYPRG-IVEDVLVKVGTFIFPVDFVILDIDEDREGSLILGRPF 292
           GE++ T   L ++++      G +V+ +LV +GTF+F +D V+++I +  EG LIL R F
Sbjct: 12  GEIQVTSNFLAMLEKVTLETFGRMVKYILVIIGTFVFLIDVVVMEISDVEEGPLILRRSF 71

Query: 293 LATARALIDVYEGKLTLR 310
           LAT RAL+DV +G + LR
Sbjct: 72  LATFRALVDVEQGDVILR 89


>IMGA|Medtr7g040530.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 9943828-9944475 H
           EGN_Mt090430 20090702
          Length = 90

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%)

Query: 245 LVDRSIKYPRGIVEDVLVKVGTFIFPVDFVILDIDEDREGSLILGRPFLATARALIDVYE 304
           L D S  +  GIV D  VKV  F FP D +++ +   +E  L+LGR  L T++ALI V  
Sbjct: 20  LADGSKSHIDGIVRDAQVKVDKFSFPTDMIVMKMINYQECPLLLGRSLLTTSQALIYVER 79

Query: 305 GKLTLR 310
           GK+ +R
Sbjct: 80  GKIVIR 85


>IMGA|Medtr5g039360.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 16663955-16664365 H
           EGN_Mt090430 20090702
          Length = 136

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 12/105 (11%)

Query: 238 PTMMSLQLVDRSIKYPRGIVEDVLVKVGTFIFPVDFVILDIDEDREGSLILGRPFLATAR 297
           PT   L++ DR+ + P G+V +V V +  F F  D V++DI    +  + LGRPFLA A+
Sbjct: 2   PTEKLLRVADRTKEEPEGVVLNVKVAIEDFEFLADIVVMDI---HDCPVTLGRPFLAIAQ 58

Query: 298 ALIDVYEGKLTLR---------VGQEEIIFDVLKSCKLPMDCNDY 333
           A I +   ++ L+         + Q+ I  D    C    D + Y
Sbjct: 59  ARIKLEYKEIVLKARGKYLIHQISQDNIRKDAGTECHTVEDVDPY 103