Jatropha Genome Database

JcCA0315091.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315091.30 + phase: 0 /partial
         (188 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g156590.1 Aspartate-semialdehyde dehydrogenase, micro...   335   8e-93

>IMGA|Medtr4g156590.1 Aspartate-semialdehyde dehydrogenase,
           microbial chr04_pseudomolecule_IMGAG_V3
           38827843-38824119 E EGN_Mt090430 20090702
          Length = 379

 Score =  335 bits (859), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 161/188 (85%), Positives = 169/188 (89%)

Query: 1   VQRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCNIFKQQYAFNLFSHNAPVLENG 60
           V RMVVSTYQ         MEELELQTREVLEGKPPTC IF +QYAFNLFSHNA VL NG
Sbjct: 192 VLRMVVSTYQAASGAGAAAMEELELQTREVLEGKPPTCKIFNRQYAFNLFSHNASVLSNG 251

Query: 61  YNEEEMKLVKETRKIWNDMNVKVTATCIRVPVMRAHAESVNLQFEKPLDEDTARAILKNA 120
           YNEEEMKLVKETRKIWND +VKVTATCIRVPVMRAHAESVNLQFE+PLDEDTAR ILKN+
Sbjct: 252 YNEEEMKLVKETRKIWNDKDVKVTATCIRVPVMRAHAESVNLQFERPLDEDTARDILKNS 311

Query: 121 AGVVVIDDRASNHFPTPLEVSNKDDVAVGRIRRDVSQEGNHGLDIFVCGDQIRKGAALNA 180
            GVVVIDDR SN+FPTPLEVSNKDDVAVGRIRRD+SQ+GN GLDIF+CGDQIRKGAALNA
Sbjct: 312 PGVVVIDDRESNNFPTPLEVSNKDDVAVGRIRRDLSQDGNQGLDIFICGDQIRKGAALNA 371

Query: 181 IQIAELLL 188
           IQIAELLL
Sbjct: 372 IQIAELLL 379