Jatropha Genome Database

JcCA0314231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314231.10 + phase: 0 /pseudo/partial
         (300 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g039870.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...   440   e-124
IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3...    81   7e-16
IMGA|Medtr3g086600.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...    72   2e-13
IMGA|Medtr3g086600.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3...    60   2e-09
IMGA|Medtr3g153970.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...    54   9e-08
IMGA|Medtr1g028330.1 Amine oxidase; SWIRM chr01_pseudomolecule_I...    52   4e-07
IMGA|Medtr2g045700.1 Amine oxidase chr02_pseudomolecule_IMGAG_V3...    49   3e-06

>IMGA|Medtr3g039870.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           10694186-10683854 E EGN_Mt090430 20090702
          Length = 501

 Score =  440 bits (1132), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/308 (71%), Positives = 249/308 (80%), Gaps = 8/308 (2%)

Query: 1   MDSPSRXXXXXXXXXXXXXXXXKVLAENGIEDMVILEASDRIGGRIRKENFGGVSVELGA 60
           MDS +R                KVL+ENG+ED+V+LEASDRIGGRIRKE FGGVSVELGA
Sbjct: 1   MDSTNRSSVIIIGAGISGISAAKVLSENGVEDIVMLEASDRIGGRIRKECFGGVSVELGA 60

Query: 61  GWIAGVGGKESNPVWELANQSGLRTCFSDYSNARYNIYDRSGKIFPSGVAADSYKKAVDS 120
           GWIAGVGG+E+NPVWELA Q  L+TCFSDYSNAR+NIYD+SGK+ PSG+A DSYKKAV+S
Sbjct: 61  GWIAGVGGREANPVWELAVQHNLKTCFSDYSNARFNIYDQSGKLIPSGIADDSYKKAVES 120

Query: 121 AIMKLRSQEANH--------ACEVIEPPCSPKTPIELAIDFILHDFEMAEVEPISTYVDL 172
           AI KLR +E             +V +P  +PKTP+ELAIDFILHDFEMAEVEPISTYVD 
Sbjct: 121 AIQKLRDEEVEEDDEEANDDGNKVTKPSLTPKTPVELAIDFILHDFEMAEVEPISTYVDF 180

Query: 173 GEREFLVADERGYECLLYKMAEDFLFTSEGKILDNRLKLNKVVREIHHSRNGVIVETEDG 232
           GEREFLVADERGY+ LLYKMAE FLFTSEG+ILD+RLKLNKVVRE+ HSRNGV V TEDG
Sbjct: 181 GEREFLVADERGYDHLLYKMAEGFLFTSEGRILDDRLKLNKVVRELQHSRNGVTVITEDG 240

Query: 233 CVYEASYVILSVSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKFLAVXS 292
           CVYEA+YVILSVSIGVLQSDL++F PPLP+WK EAI +CDVMVYTKIFLKFPY+F     
Sbjct: 241 CVYEANYVILSVSIGVLQSDLLAFNPPLPRWKLEAIEKCDVMVYTKIFLKFPYRFWPCGP 300

Query: 293 XKGVLIYA 300
            K   +YA
Sbjct: 301 EKEFFMYA 308


>IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3
           38819227-38814231 F EGN_Mt090430 20090702
          Length = 488

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 127/289 (43%), Gaps = 57/289 (19%)

Query: 33  MVILEASDRIGGRIRKENFGGVSVELGAGWIAGVGGKESNPVWELANQSGL---RTC--- 86
           +V+LE+ DRIGGRI  +   G  V+LGA W+ GV  +  NP+  L  + GL   RTC   
Sbjct: 53  VVLLESRDRIGGRIHTDYSFGFPVDLGASWLHGVCNE--NPLAPLIGRLGLPLYRTCEDN 110

Query: 87  --FSDYSNARYNIYDRSGKIFPSGVAADSYKKAVDSAIMKLRSQEANHACEVIEPPCS-- 142
               D+    Y ++D  G   P  +  +  K        ++  QE ++  +      S  
Sbjct: 111 SVLYDHDLESYALFDMEGNQVPQELVTEVGKT------FEMILQETDNVRQEFSEDMSIL 164

Query: 143 -------PKTPIELAIDFILHD-----------FEMAEVEPISTYVDLGEREFLVADE-- 182
                   + P EL ++ + H            +  A+ + IS      + E L      
Sbjct: 165 RALSIVFERKP-ELRLEGLSHKVLQWYLCRMEGWFAADSDSISLKC-WDQEELLPGGHGL 222

Query: 183 --RGYECLLYKMAEDFLFTSEGKILDNRL--KLNKVVREIHHSRNGVIVETEDGCVYEAS 238
             RGY  +++ +A         K LD RL  +  K+VR      NGV V TE+G  + A 
Sbjct: 223 MVRGYLPVIHTLA---------KGLDIRLGHRATKIVR----GYNGVKVTTENGKTFVAD 269

Query: 239 YVILSVSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
             I++V +GVL++++I F P LP WK  AI    V V  KI L F   F
Sbjct: 270 AAIIAVPLGVLKANVIKFEPKLPDWKEAAIADIGVGVENKIILHFKNVF 318


>IMGA|Medtr3g086600.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           20299092-20305101 E EGN_Mt090430 20090702
          Length = 496

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 53/289 (18%)

Query: 33  MVILEASDRIGGRIRKENFGGVSVELGAGWIAGVGGKESNPV--------WELANQSGLR 84
           + +LE+ DR+GGRI  +   G  V++GA W+ GV  +  NP+          L   SG  
Sbjct: 53  VTLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNE--NPLAPLIRCLGLTLYRTSGDD 110

Query: 85  TCFSDYSNARYNIYDRSGKIFPSGVA---ADSYKK----------------AVDSAIM-- 123
           +   D+      ++D  G   P        +++K+                +V  AI   
Sbjct: 111 SVLYDHDLESCMLFDIDGHQVPQQTVIEVGETFKRILEETGKVRDEHPEDISVSEAISIV 170

Query: 124 -----KLRSQEANHACEVIEPPCSPKTPIELAIDFILHDFEMAEVEPISTYVDLGEREFL 178
                +LR Q  +H  EV++     +     A D  +   +  +      +V  G    +
Sbjct: 171 LDRHPQLRQQGLSH--EVLQWYIC-RMEAWFAADADMISLKTWDQASAIEHVLSGGHGLM 227

Query: 179 VADERGYECLLYKMAEDFLFTSEGKILDNRLKLNKVVREIHHSRNGVIVETEDGCVYEAS 238
           V   +GY+ ++  +A+D             ++LN  V +I    N V+V  EDG  + A 
Sbjct: 228 V---QGYKPVINALAKDI-----------DIRLNHRVTKISSGYNKVMVTLEDGRNFVAD 273

Query: 239 YVILSVSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
             I++V IG+L+++LI F P LP WK  AI    V    KI LKF   F
Sbjct: 274 AAIITVPIGILKANLIEFEPRLPDWKVSAISDLGVGNENKIALKFDKVF 322


>IMGA|Medtr3g086600.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           20299092-20305101 E EGN_Mt090430 20090702
          Length = 270

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 183 RGYECLLYKMAEDFLFTSEGKILDNRLKLNKVVREIHHSRNGVIVETEDGCVYEASYVIL 242
           +GY+ ++  +A+D             ++LN  V +I    N V+V  EDG  + A   I+
Sbjct: 3   QGYKPVINALAKDI-----------DIRLNHRVTKISSGYNKVMVTLEDGRNFVADAAII 51

Query: 243 SVSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLKFPYKF 287
           +V IG+L+++LI F P LP WK  AI    V    KI LKF   F
Sbjct: 52  TVPIGILKANLIEFEPRLPDWKVSAISDLGVGNENKIALKFDKVF 96


>IMGA|Medtr3g153970.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           40614967-40624335 E EGN_Mt090430 20090702
          Length = 1328

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 209 LKLNKVVREIHHSR------NGVIVETEDGCVYEASYVILSVSIGVLQSDLISFRPPLPK 262
           + LN VV  + +        N V V T +G  +    V+++V +G L+++ I F PPLP 
Sbjct: 422 IHLNHVVTNVSYDSKESGLGNKVKVSTSNGNEFFGDAVLVTVPLGCLKAETIKFSPPLPP 481

Query: 263 WKTEAIGRCDVMVYTKIFLKFPYKF 287
           WK  +I R    V  K+ L+FP  F
Sbjct: 482 WKYSSIQRLGFGVLNKVVLEFPSVF 506


>IMGA|Medtr1g028330.1 Amine oxidase; SWIRM
            chr01_pseudomolecule_IMGAG_V3 6838806-6852075 E
            EGN_Mt090430 20090702
          Length = 1932

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 223  NGVIVETEDGCVYEASYVILSVSIGVLQSDLISFRPPLPKWKTEAIGRCDVMVYTKIFLK 282
            N V V T +G  +    V+++V +G L+++ I F P LP+WK  +I R    V  K+ L+
Sbjct: 1134 NKVKVSTLNGSEFFGDAVLITVPLGCLKAETIQFTPSLPEWKCSSIQRLGFGVLNKVILE 1193

Query: 283  FPYKF 287
            FP  F
Sbjct: 1194 FPTVF 1198


>IMGA|Medtr2g045700.1 Amine oxidase chr02_pseudomolecule_IMGAG_V3
          12683142-12681098 E EGN_Mt090430 20090702
          Length = 546

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 26 AENGIEDMVILEASDRIGGRIRKENFGGVSVELGAGWIAGVGGKESNPVWELANQ 80
          A   + +++++E   RIGGRI    FGG  +E+GA WI G+G   ++P+ ++A Q
Sbjct: 29 ASKDLFELIVVEGGTRIGGRINTSEFGGDKIEMGATWIHGIG---NSPIHKIAQQ 80