Jatropha Genome Database

JcCA0313841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313841.10 + phase: 2 /partial
         (269 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase chr03_pseudo...   473   e-134
IMGA|Medtr7g034770.1 Protein of unknown function DUF89 chr07_pse...   165   2e-41
IMGA|Medtr7g034760.1 Protein of unknown function DUF89 chr07_pse...   161   3e-40
IMGA|Medtr6g069730.2 Protein of unknown function DUF89 chr06_pse...   144   4e-35

>IMGA|Medtr3g113960.1 Eukaryotic pantothenate kinase
           chr03_pseudomolecule_IMGAG_V3 28749151-28738871 E
           EGN_Mt090430 20090702
          Length = 899

 Score =  473 bits (1217), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/269 (85%), Positives = 242/269 (89%), Gaps = 1/269 (0%)

Query: 1   ENEASLAVLPDLLTELDGMTEETRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRM 60
           ENEASLAVLPDL  ELD M EETRLL LIEGVLAANIFDWGSRACVDLYHKGTIIEIYRM
Sbjct: 632 ENEASLAVLPDLFVELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRM 691

Query: 61  SRDKMQRPWRVDDFDVFKERMLGSGDNKPRPHKRALLFVDNSGADIVLGMLPLARELLRR 120
           SR+KM+RPWRVDDFD+FKERMLG+GD K  PH+RALLFVDNSGADIVLGMLPLARELLRR
Sbjct: 692 SRNKMRRPWRVDDFDLFKERMLGTGDKKKAPHRRALLFVDNSGADIVLGMLPLARELLRR 751

Query: 121 GTEVVLVANSLPALNDVTAMELPEIVAEAAKHCDILRRAAEAGGLLVDAMINTLDSSKEN 180
           GTEVVLVANSLPALNDVTAMELP+IVAEAAKHCDILRRAAEAGGLLVDAMINT DSSKEN
Sbjct: 752 GTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINT-DSSKEN 810

Query: 181 SASVPLMVVENGCGSPCIDFRQVSSEXXXXXXXXXXXXXEGMGRALHTNFNAQFKCDVLK 240
           S+SVPLMVVENGCGSPCID RQVSSE             EGMGR+LHTN  AQFKCD LK
Sbjct: 811 SSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLYAQFKCDALK 870

Query: 241 LAMVKNQRLAEKLIKGKIYDCVCRYEPAS 269
           LAMVKNQRLAEKLIKG IYDC+C+Y+PAS
Sbjct: 871 LAMVKNQRLAEKLIKGNIYDCICKYQPAS 899


>IMGA|Medtr7g034770.1 Protein of unknown function DUF89
           chr07_pseudomolecule_IMGAG_V3 8360789-8366214 H
           EGN_Mt090430 20090702
          Length = 370

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 141/267 (52%), Gaps = 28/267 (10%)

Query: 1   ENEASLAVLPDLLTELDGMTEE-TRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYR 59
           EN  ++++  +++   D + +E  RL  L+ G+ A N+FD GS    + + +   +    
Sbjct: 129 ENAKAISLFENVVRLNDAIEDEGKRLENLVRGIFAGNVFDLGSPQLAEAFSRDGGMSFSA 188

Query: 60  MSRDKMQRPWRVDDFDVFKERMLGSGDNKPRPHKRALLFVDNSGADIVLGMLPLARELLR 119
              +   RPW +DD D  K R       K       ++FVDNSGADI+LG+LP ARELLR
Sbjct: 189 TCENLQPRPWIIDDLDTLKMRW----SKKSWKKASVIIFVDNSGADIILGILPFARELLR 244

Query: 120 RGTEVVLVANSLPALNDVTAMELPEIVAEAAKHCDILRRAAEAGGLLVDAMINTLDSSKE 179
           RG +V+L AN LP++NDVT  EL EI+++            E G LL  +  N       
Sbjct: 245 RGNQVILAANDLPSINDVTYSELIEIISQLKD---------EEGRLLGVSTSN------- 288

Query: 180 NSASVPLMVVENGCGSPCIDFRQVSSEXXXXXXXXXXXXXEGMGRALHTNFNAQFKCDVL 239
                 L++  +G   P ID  +VS E             EGMGR + TN  AQF+CD +
Sbjct: 289 ------LLIANSGSDLPAIDLTKVSQELACLATDVDLVILEGMGRGIETNLYAQFRCDSM 342

Query: 240 KLAMVKNQRLAEKLIKGKIYDCVCRYE 266
           K+AMVKN  +A K +K ++YDCV +Y+
Sbjct: 343 KIAMVKNTGVA-KFLKSRMYDCVIKYD 368


>IMGA|Medtr7g034760.1 Protein of unknown function DUF89
           chr07_pseudomolecule_IMGAG_V3 8352606-8356264 E
           EGN_Mt090430 20090702
          Length = 369

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/266 (36%), Positives = 144/266 (54%), Gaps = 29/266 (10%)

Query: 1   ENEASLAVLPDLLTELDGMTEE-TRLLMLIEGVLAANIFDWGSRACVDLYHKGTIIEIYR 59
           EN  ++++  +++   D + +E  RL  L+ G+ A N+FD GS    + + +  +     
Sbjct: 129 ENAKAISLFENVVRLNDAIEDEGNRLENLVRGIFAGNVFDLGSPQLAEAFSRDGM-SFSA 187

Query: 60  MSRDKMQRPWRVDDFDVFKERMLGSGDNKPRPHKRALLFVDNSGADIVLGMLPLARELLR 119
              + + RPW +DD D  K R       K       ++FVDNSGADI+LG+LP ARELLR
Sbjct: 188 TCENLLPRPWIIDDLDTLKIRW----SKKSWKKASVIIFVDNSGADIILGILPFARELLR 243

Query: 120 RGTEVVLVANSLPALNDVTAMELPEIVAEAAKHCDILRRAAEAGGLLVDAMINTLDSSKE 179
           RG++VVL AN LP++NDVT  EL EI++         +   E G LL       + +SK 
Sbjct: 244 RGSQVVLAANDLPSINDVTYSELIEIIS---------KLKDEEGRLL------GVSTSK- 287

Query: 180 NSASVPLMVVENGCGSPCIDFRQVSSEXXXXXXXXXXXXXEGMGRALHTNFNAQFKCDVL 239
                 L++  +G   P ID  +VS E             EGMGR + TN  AQFKCD +
Sbjct: 288 ------LLIANSGNDLPVIDLTKVSQELASLTSDVDLVILEGMGRGIETNLYAQFKCDSM 341

Query: 240 KLAMVKNQRLAEKLIKGKIYDCVCRY 265
           K+AMVK+  +AE  ++ ++YDCV +Y
Sbjct: 342 KIAMVKHPEVAE-FLESRMYDCVIKY 366


>IMGA|Medtr6g069730.2 Protein of unknown function DUF89
           chr06_pseudomolecule_IMGAG_V3 12965534-12969084 E
           EGN_Mt090430 20090702
          Length = 181

 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 113/208 (54%), Gaps = 35/208 (16%)

Query: 62  RDKMQRPWRVDDFDVFKERMLGSGDNKPRPHKRALLFVDNSGADIVLGMLPLARELLRRG 121
           ++ + RPW +DD + FK                 ++FVDNSGADI+LG+LP ARELLRRG
Sbjct: 8   QNLVTRPWVIDDLEAFK----------------VIIFVDNSGADIILGILPFARELLRRG 51

Query: 122 TEVVLVANSLPALNDVTAMELPEIVAEAAKHCDILRRAAEAGGLLVDAMINTLDSSKENS 181
           ++VVL AN LP++NDVT  EL EI+             ++ G  L D   N +  S  N 
Sbjct: 52  SQVVLAANDLPSINDVTYSELVEII-------------SKVGFQLKDEEGNLVGVSTSN- 97

Query: 182 ASVPLMVVENGCGSPCIDFRQVSSEXXXXXXXXXXXXXEGMGRALHTNFNAQFKCDVLKL 241
               L++  +G   P ID  +VS E             EGMGR + TN  AQFKCD LK+
Sbjct: 98  ----LLIANSGNDLPVIDLARVSQELAYLASDADLVVLEGMGRGIETNLYAQFKCDSLKI 153

Query: 242 AMVKNQRLAEKLIKGKIYDCVCRYEPAS 269
            MVK+  +A+  + G++YDCV +Y   S
Sbjct: 154 GMVKHPEVAQ-FLGGRLYDCVLKYNEVS 180