Jatropha Genome Database

JcCA0313071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0313071.10 + phase: 0 
         (365 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g048590.1 Alpha-1,4-glucan-protein synthase (UDP-form...   660   0.0  
IMGA|Medtr7g089260.1 Alpha-1,4-glucan-protein synthase (UDP-form...   368   e-102

>IMGA|Medtr5g048590.1 Alpha-1,4-glucan-protein synthase
           (UDP-forming) chr05_pseudomolecule_IMGAG_V3
           20550596-20553315 F EGN_Mt090430 20090702
          Length = 362

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/356 (87%), Positives = 334/356 (93%), Gaps = 1/356 (0%)

Query: 4   SSIKPTPLLRDELDIVIPTIRNLDFLEMWRAFFEPYHLIIVQDGDPSKTIKVPDGFDYEL 63
           SS KPTPLL+DELDIVIPTIRNLDFLEMWR FFE YHLIIVQDGDPSK IKVP GFDYEL
Sbjct: 3   SSSKPTPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPQGFDYEL 62

Query: 64  YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQ 123
           YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYI+TIDDDCFVAKDP+G EINALEQ
Sbjct: 63  YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQ 122

Query: 124 HIKNLLSPSTPHFFNTLYDPYRDGADFVRGYPFSLREGVITAVSHGLWLNIPDYDAPTQL 183
           HIKNLLSPSTP FFNTLYDPYRDGADFVRGYPFSLREGV TAVSHGLWLNIPDYDAPTQL
Sbjct: 123 HIKNLLSPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQL 182

Query: 184 VKPLERNTRYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRYDDMWA 243
           VKP ERNTR+VDAVMT+PKGTLFPMCGMNLAF+RELIGPAMYFGLMGDGQP+GRYDDMWA
Sbjct: 183 VKPHERNTRFVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWA 242

Query: 244 GWCMKVICDHMGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEQLIPFFQSVVLPKEC 303
           GWC+KVICDH+G GVKTGLPYIWHSKASNPFVNLKKEYKGIFWQE++IPFFQ+  L K+C
Sbjct: 243 GWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKDC 302

Query: 304 TTVQKCYIELAKQVKEKFADEDPYFVKLADAMVTWIEAWNEL-NSPEGKSATGSAK 358
           T+VQKCYIEL+KQVKEK    DPYFVKLADAMVTWIEAW+E+ NS E K++  +++
Sbjct: 303 TSVQKCYIELSKQVKEKLGTIDPYFVKLADAMVTWIEAWDEINNSAEVKTSDKASE 358


>IMGA|Medtr7g089260.1 Alpha-1,4-glucan-protein synthase
           (UDP-forming) chr07_pseudomolecule_IMGAG_V3
           19564226-19562669 F EGN_Mt090430 20090702
          Length = 347

 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 172/339 (50%), Positives = 240/339 (70%), Gaps = 6/339 (1%)

Query: 14  DELDIVIPTIR-NLD-FLEMWRAFFEPYHLIIVQDGDPSKTIKVPDGFDYELYNRNDINR 71
           +E+DIVI  +  NL  F+  W++ F  +HLIIV+D    + +++P+GF  ++Y  ++I R
Sbjct: 9   NEVDIVIGALHSNLTPFMNEWKSIFSRFHLIIVKDPALKEELQIPEGFSADVYTNSEIER 68

Query: 72  ILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKEINALEQHIKNLLSP 131
           ++G   S I F   ACR FG++VSKKKY+  IDDDC  AKD +G  ++A+ QHI NL +P
Sbjct: 69  VVGSSTS-IRFSGYACRYFGFLVSKKKYVVCIDDDCVPAKDDAGNVVDAVAQHIVNLKTP 127

Query: 132 STPHFFNTLYDPYRDGADFVRGYPFSLREGVITAVSHGLWLNIPDYDAPTQLVKPLERNT 191
           +TP FFNTLYDP+R GADFVRGYPFSLR GV  A+S GLWLN+ D DAPTQ +KP +RN+
Sbjct: 128 ATPFFFNTLYDPFRKGADFVRGYPFSLRSGVDCALSCGLWLNLADLDAPTQALKPTQRNS 187

Query: 192 RYVDAVMTVPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPVGRY---DDMWAGWCMK 248
           RYVDAV+TVP   + P+ G+N+AFNREL+GPA+   L+  G+   R+   +D+W G C+K
Sbjct: 188 RYVDAVLTVPTRAMLPVSGINIAFNRELVGPALVPALVLAGEGKLRWETVEDIWCGLCVK 247

Query: 249 VICDHMGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEQLIPFFQSVVLPKECTTVQK 308
           ++CDH+  GVK+GLPY+W ++  N   +LKKE++G+   E ++PFFQSV LP+  TT + 
Sbjct: 248 IVCDHLSLGVKSGLPYVWRNERGNAIDSLKKEWEGVKLMEDVVPFFQSVKLPQSATTAED 307

Query: 309 CYIELAKQVKEKFADEDPYFVKLADAMVTWIEAWNELNS 347
           C IE+AK VKE+    DP F+K ADAM  W++ W  + S
Sbjct: 308 CVIEMAKSVKEQLGKVDPMFLKAADAMAEWVKLWKSVGS 346