Jatropha Genome Database
- JcCA0312961.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0312961.10 - phase: 0 /partial
(402 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr7g096930.1 Aspartate kinase region chr07_pseudomolecul... 390 e-109
IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA syn... 122 2e-28
IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I; Bifunct... 114 1e-25
IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I; Bifunct... 114 1e-25
IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I; Bifunct... 109 3e-24
IMGA|Medtr7g096920.1 Aspartate kinase region chr07_pseudomolecul... 89 5e-18
>IMGA|Medtr7g096930.1 Aspartate kinase region
chr07_pseudomolecule_IMGAG_V3 21815615-21821919 E
EGN_Mt090430 20090702
Length = 472
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/233 (80%), Positives = 203/233 (87%), Gaps = 13/233 (5%)
Query: 139 AGERAVSCGVTNVETIDELSFIKELHLR-------------TVDELEVDKSVIEPHLEEL 185
AGE+AVSCGVTN ++IDELS IK+LHLR TV+EL VD+ VI HLEEL
Sbjct: 29 AGEKAVSCGVTNADSIDELSDIKDLHLRSGNGLSFSSFQVQTVEELGVDRDVISKHLEEL 88
Query: 186 EQLLKGVAMMKELTPRTRDYLVSFGECMSTRIFAAYLNKIGAKARQYDAFDIGFITTDDF 245
EQLLKG+AMMKELTPRT+DYLVSFGECMSTRIFAAYLNKIG KARQYDAF+IGFITTDDF
Sbjct: 89 EQLLKGIAMMKELTPRTQDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFEIGFITTDDF 148
Query: 246 TNADILEATYPAVAKRLYGDWISDPAIPIVTGFLGKGWRSCAITTLGRGGSDLTATTIGK 305
TNADILEATYPAVAKRL+ DW+SDPAIPIVTGFLGK +SC TTLGRGGSDLTATTIGK
Sbjct: 149 TNADILEATYPAVAKRLHSDWVSDPAIPIVTGFLGKARKSCVRTTLGRGGSDLTATTIGK 208
Query: 306 ALSLREIQVWKDVDGVLTCDPNIYPAAEPVPYLTFDEAAELAYFGAQVSNPMA 358
AL L+EIQVWKDVDGVLTCDPNI P A+PVPYLTFDEAAELAYFGAQV +P +
Sbjct: 209 ALGLQEIQVWKDVDGVLTCDPNICPQAQPVPYLTFDEAAELAYFGAQVLHPQS 261
>IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA
synthetase, class I chr03_pseudomolecule_IMGAG_V3
26062388-26055010 E EGN_Mt090430 20090702
Length = 906
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 152/306 (49%), Gaps = 20/306 (6%)
Query: 76 TEYFSDVSTE----PDKQLTCVMKFGGSSVASAERMKEVADLILSFPNERPVIVLSAMGK 131
T++ DV+ E P + V KFGG+ V S+ R+ VAD+I++ +ER ++V+SAM K
Sbjct: 58 TDFSVDVAVEEKKLPKGETWSVHKFGGTCVGSSARINNVADVIINDDSERKLVVVSAMSK 117
Query: 132 TTN---KLLLAGERAVSCGVTNVETIDELSFIKELHLRTVDELEVDKSVIEPHLEELEQL 188
T+ L+ E ++ ++ ++E + L D+L S + + L+ +
Sbjct: 118 VTDMMYDLIHKAEAQDKSYISALDAVEEKHSLTASELFDGDDLATFLSNLHQDVGNLKAM 177
Query: 189 LKGVAMMKELTPRTRDYLVSFGECMSTRIFAAYLNKIGAKARQYDAFDIGFITTDDFTNA 248
L+ + + T D +V GE S +I + + K G + D ++ + T+A
Sbjct: 178 LQAIDIAGHATESFTDLVVGHGELWSAQILSYVVKKKGTPCKWMDTREVLIVNP---THA 234
Query: 249 DILEATYPAVAKRLYGDWIS-DPA-IPIVTGFLGKGWRSCAITTLGRGGSDLTATTIGKA 306
D ++ Y +RL W S +P+ + I TGF+ ++ TTL R GSD +A +G
Sbjct: 235 DQVDPDYLETEQRL-NKWYSLNPSKVIIATGFIASTPQNIP-TTLKRDGSDFSAAIMGAI 292
Query: 307 LSLREIQVWKDVDGVLTCDPNIYPAAEPVPYLTFDEAAELAYFGAQVSNPMASSWLSMQL 366
R++ +W DVDGV + DP A + L++ EA E++YFGA V +P S
Sbjct: 293 FRARQVTIWTDVDGVYSADPRKVSDAVILKTLSYQEAWEMSYFGANVLHPRTIS------ 346
Query: 367 PYIEFG 372
P I +G
Sbjct: 347 PVIRYG 352
>IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I;
Bifunctional aspartokinase/homoserine dehydrogenase I
chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
EGN_Mt090430 20090702
Length = 909
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 20/274 (7%)
Query: 93 VMKFGGSSVASAERMKEVADLILSFPNERPVIVLSAMGKTTNKLLLAGERAVSCGVTNVE 152
V KFGG+ + S++R+K V D++L+ +ER ++V+SAM K T+ + +A S + +
Sbjct: 82 VHKFGGTCMGSSQRIKNVGDIVLNDDSERKLVVVSAMSKVTDMMYDLINKAQSRDESYIS 141
Query: 153 TIDELSFIKELHLRTVDE------LEVDKSVIEPHLEELEQLLKGVAMMKELTPRTRDYL 206
++D + E H T + L + S + + L+ +L+ + + +T D++
Sbjct: 142 SLDA---VLEKHSATAHDILDGETLAIFLSKLHEDISNLKAMLRAIYIAGHVTESFTDFV 198
Query: 207 VSFGECMSTRIFAAYLNKIGAKARQYDAFDIGFI--TTDDFTNADILEATYPAVAKRLYG 264
V GE S ++ + + K G + D ++ + T+ + + D LE+ +R
Sbjct: 199 VGHGELWSAQMLSLVIRKNGIDCKWMDTREVLIVNPTSSNQVDPDYLES------ERRLE 252
Query: 265 DWIS-DP-AIPIVTGFLGKGWRSCAITTLGRGGSDLTATTIGKALSLREIQVWKDVDGVL 322
W S +P + I TGF+ + TTL R GSD +A +G R++ +W DVDGV
Sbjct: 253 KWYSLNPCKVIIATGFIASTPENIP-TTLKRDGSDFSAAIMGSLFRARQVTIWTDVDGVY 311
Query: 323 TCDPNIYPAAEPVPYLTFDEAAELAYFGAQVSNP 356
+ DP A + L++ EA E++YFGA V +P
Sbjct: 312 SADPRKVSEAVILKTLSYQEAWEMSYFGANVLHP 345
>IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I;
Bifunctional aspartokinase/homoserine dehydrogenase I
chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
EGN_Mt090430 20090702
Length = 916
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 20/274 (7%)
Query: 93 VMKFGGSSVASAERMKEVADLILSFPNERPVIVLSAMGKTTNKLLLAGERAVSCGVTNVE 152
V KFGG+ + S++R+K V D++L+ +ER ++V+SAM K T+ + +A S + +
Sbjct: 89 VHKFGGTCMGSSQRIKNVGDIVLNDDSERKLVVVSAMSKVTDMMYDLINKAQSRDESYIS 148
Query: 153 TIDELSFIKELHLRTVDE------LEVDKSVIEPHLEELEQLLKGVAMMKELTPRTRDYL 206
++D + E H T + L + S + + L+ +L+ + + +T D++
Sbjct: 149 SLDA---VLEKHSATAHDILDGETLAIFLSKLHEDISNLKAMLRAIYIAGHVTESFTDFV 205
Query: 207 VSFGECMSTRIFAAYLNKIGAKARQYDAFDIGFI--TTDDFTNADILEATYPAVAKRLYG 264
V GE S ++ + + K G + D ++ + T+ + + D LE+ +R
Sbjct: 206 VGHGELWSAQMLSLVIRKNGIDCKWMDTREVLIVNPTSSNQVDPDYLES------ERRLE 259
Query: 265 DWIS-DP-AIPIVTGFLGKGWRSCAITTLGRGGSDLTATTIGKALSLREIQVWKDVDGVL 322
W S +P + I TGF+ + TTL R GSD +A +G R++ +W DVDGV
Sbjct: 260 KWYSLNPCKVIIATGFIASTPENIP-TTLKRDGSDFSAAIMGSLFRARQVTIWTDVDGVY 318
Query: 323 TCDPNIYPAAEPVPYLTFDEAAELAYFGAQVSNP 356
+ DP A + L++ EA E++YFGA V +P
Sbjct: 319 SADPRKVSEAVILKTLSYQEAWEMSYFGANVLHP 352
>IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I;
Bifunctional aspartokinase/homoserine dehydrogenase I
chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
EGN_Mt090430 20090702
Length = 917
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 142/276 (51%), Gaps = 23/276 (8%)
Query: 93 VMKFGGSSVASAERMKEVADLILSFPNERPVIVLSAMGKTTNKLLLAGERAVSCGVTNVE 152
V KFGG+ + S++R+K V D++L+ +ER ++V+SAM K T+ + +A S + +
Sbjct: 89 VHKFGGTCMGSSQRIKNVGDIVLNDDSERKLVVVSAMSKVTDMMYDLINKAQSRDESYIS 148
Query: 153 TIDELSFIKELHLRTVDELEVDKSVIEPHLEELEQLLKGV-AMMK-------ELTPRTRD 204
++D + E H T ++ +D + L +L + + + AM++ +T D
Sbjct: 149 SLDA---VLEKHSATAHDI-LDGETLAIFLSKLHEDISNLKAMLRAIYIGPGHVTESFTD 204
Query: 205 YLVSFGECMSTRIFAAYLNKIGAKARQYDAFDIGFI--TTDDFTNADILEATYPAVAKRL 262
++V GE S ++ + + K G + D ++ + T+ + + D LE+ +R
Sbjct: 205 FVVGHGELWSAQMLSLVIRKNGIDCKWMDTREVLIVNPTSSNQVDPDYLES------ERR 258
Query: 263 YGDWIS-DP-AIPIVTGFLGKGWRSCAITTLGRGGSDLTATTIGKALSLREIQVWKDVDG 320
W S +P + I TGF+ + TTL R GSD +A +G R++ +W DVDG
Sbjct: 259 LEKWYSLNPCKVIIATGFIASTPENIP-TTLKRDGSDFSAAIMGSLFRARQVTIWTDVDG 317
Query: 321 VLTCDPNIYPAAEPVPYLTFDEAAELAYFGAQVSNP 356
V + DP A + L++ EA E++YFGA V +P
Sbjct: 318 VYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHP 353
>IMGA|Medtr7g096920.1 Aspartate kinase region
chr07_pseudomolecule_IMGAG_V3 21814402-21814915 E
EGN_Mt090430 20090702
Length = 147
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%)
Query: 85 EPDKQLTCVMKFGGSSVASAERMKEVADLILSFPNERPVIVLSAMGKTTNKLLLAGERAV 144
E +K + VMKFGGSSVA+A RMKE+A+LILSFP ERP+IVLSAMGKTTNKLLL R +
Sbjct: 73 ETEKSYSVVMKFGGSSVANAVRMKEIANLILSFPEERPIIVLSAMGKTTNKLLLGRCRYI 132
Query: 145 S 145
+
Sbjct: 133 N 133