Jatropha Genome Database
- JcCA0312381.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0312381.20 + phase: 0
(234 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g017000.1 Glutathione peroxidase chr01_pseudomolecule... 318 1e-87
IMGA|Medtr4g149540.3 Glutathione peroxidase chr04_pseudomolecule... 255 1e-68
IMGA|Medtr4g149540.2 Glutathione peroxidase chr04_pseudomolecule... 254 4e-68
IMGA|Medtr4g149540.5 Glutathione peroxidase chr04_pseudomolecule... 252 1e-67
IMGA|Medtr4g149540.1 Thioredoxin fold chr04_pseudomolecule_IMGAG... 246 5e-66
IMGA|Medtr4g156860.1 Glutathione peroxidase chr04_pseudomolecule... 238 1e-63
IMGA|Medtr4g149530.2 Glutathione peroxidase chr04_pseudomolecule... 218 2e-57
IMGA|Medtr4g149530.1 Thioredoxin fold chr04_pseudomolecule_IMGAG... 209 1e-54
IMGA|Medtr5g010450.1 Thioredoxin fold chr05_pseudomolecule_IMGAG... 196 1e-50
IMGA|Medtr4g149540.4 Thioredoxin fold chr04_pseudomolecule_IMGAG... 159 1e-39
IMGA|Medtr1g086710.1 Thioredoxin fold chr01_pseudomolecule_IMGAG... 112 2e-25
IMGA|Medtr1g086700.1 Glutathione peroxidase chr01_pseudomolecule... 82 3e-16
>IMGA|Medtr1g017000.1 Glutathione peroxidase
chr01_pseudomolecule_IMGAG_V3 3474733-3478915 E
EGN_Mt090430 20090702
Length = 236
Score = 318 bits (816), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 183/221 (82%), Gaps = 6/221 (2%)
Query: 20 SFSPAMAFCIPSMKTSF-----GPSKSAFLQHGFSLQLP-NFPGFLSKTHSFAVYARAAT 73
+F+ A IPS+ F SKS F QHGFS +FP + K+ SF+V ARA T
Sbjct: 16 NFNQARTNSIPSISLPFVKSSIPSSKSPFFQHGFSQPTSFDFPKAVLKSRSFSVNARAVT 75
Query: 74 EKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYTELSHIYEKYKTQGFEI 133
+K+I+D+TVKDID VPLSKFKGKVLLIVNVAS+CGLT+SNYTELSH+YE +K +G E+
Sbjct: 76 DKSIYDFTVKDIDKKDVPLSKFKGKVLLIVNVASRCGLTSSNYTELSHLYENFKDKGLEV 135
Query: 134 LAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLG 193
LAFPCNQFG QEPGSN EIK+FACTR+KAEFPIFDKVDVNGP TAPVYQFLKSS+GGF G
Sbjct: 136 LAFPCNQFGMQEPGSNEEIKKFACTRFKAEFPIFDKVDVNGPFTAPVYQFLKSSSGGFFG 195
Query: 194 DLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 234
DL+KWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA
Sbjct: 196 DLVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 236
>IMGA|Medtr4g149540.3 Glutathione peroxidase
chr04_pseudomolecule_IMGAG_V3 37204148-37200964 E
EGN_Mt090430 20090702
Length = 211
Score = 255 bits (652), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/177 (67%), Positives = 140/177 (79%)
Query: 58 FLSKTHSFAVYARAATEKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYT 117
+LS+ + A A+ ++IHD+TVKD GN V L +KGKVL+IVNVAS+CGLT SNYT
Sbjct: 35 WLSEQRTDHTMASASNPQSIHDFTVKDAKGNDVNLGDYKGKVLIIVNVASQCGLTNSNYT 94
Query: 118 ELSHIYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPNT 177
ELS +YEKYK++G EILAFPCNQFG QEPGS EI+ F CTR+KAEFP+FDKVDVNG
Sbjct: 95 ELSQLYEKYKSKGLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVDVNGATA 154
Query: 178 APVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 234
AP+Y++LKSS GG GD IKWNF KFLVDKNG VV+RY PTTSP IEKD+ KLL A
Sbjct: 155 APIYKYLKSSKGGLFGDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLLDA 211
>IMGA|Medtr4g149540.2 Glutathione peroxidase
chr04_pseudomolecule_IMGAG_V3 37204148-37200964 E
EGN_Mt090430 20090702
Length = 212
Score = 254 bits (648), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 141/187 (75%)
Query: 48 FSLQLPNFPGFLSKTHSFAVYARAATEKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVAS 107
+S+ N + + A A+ ++IHD+TVKD GN V L +KGKVL+IVNVAS
Sbjct: 26 YSVHTHNCRWLSEQRRTDHTMASASNPQSIHDFTVKDAKGNDVNLGDYKGKVLIIVNVAS 85
Query: 108 KCGLTASNYTELSHIYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIF 167
+CGLT SNYTELS +YEKYK++G EILAFPCNQFG QEPGS EI+ F CTR+KAEFP+F
Sbjct: 86 QCGLTNSNYTELSQLYEKYKSKGLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVF 145
Query: 168 DKVDVNGPNTAPVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKD 227
DKVDVNG AP+Y++LKSS GG GD IKWNF KFLVDKNG VV+RY PTTSP IEKD
Sbjct: 146 DKVDVNGATAAPIYKYLKSSKGGLFGDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIEKD 205
Query: 228 IQKLLAA 234
+ KLL A
Sbjct: 206 LLKLLDA 212
>IMGA|Medtr4g149540.5 Glutathione peroxidase
chr04_pseudomolecule_IMGAG_V3 37204148-37200964 E
EGN_Mt090430 20090702
Length = 196
Score = 252 bits (644), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/178 (67%), Positives = 140/178 (78%), Gaps = 3/178 (1%)
Query: 57 GFLSKTHSFAVYARAATEKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNY 116
G +K H+ A A+ ++IHD+TVKD GN V L +KGKVL+IVNVAS+CGLT SNY
Sbjct: 22 GSQNKDHTMA---SASNPQSIHDFTVKDAKGNDVNLGDYKGKVLIIVNVASQCGLTNSNY 78
Query: 117 TELSHIYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPN 176
TELS +YEKYK++G EILAFPCNQFG QEPGS EI+ F CTR+KAEFP+FDKVDVNG
Sbjct: 79 TELSQLYEKYKSKGLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVDVNGAT 138
Query: 177 TAPVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 234
AP+Y++LKSS GG GD IKWNF KFLVDKNG VV+RY PTTSP IEKD+ KLL A
Sbjct: 139 AAPIYKYLKSSKGGLFGDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLLDA 196
>IMGA|Medtr4g149540.1 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
37204088-37200964 E EGN_Mt090430 20090702
Length = 244
Score = 246 bits (629), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 118/177 (66%), Positives = 136/177 (76%), Gaps = 11/177 (6%)
Query: 69 ARAATEKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYTELSHIYEKYKT 128
A A+ ++IHD+TVKD GN V L +KGKVL+IVNVAS+CGLT SNYTELS +YEKYK+
Sbjct: 68 ASASNPQSIHDFTVKDAKGNDVNLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKS 127
Query: 129 QGF-----------EILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPNT 177
+GF EILAFPCNQFG QEPGS EI+ F CTR+KAEFP+FDKVDVNG
Sbjct: 128 KGFLSSLLSLCFCLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVDVNGATA 187
Query: 178 APVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 234
AP+Y++LKSS GG GD IKWNF KFLVDKNG VV+RY PTTSP IEKD+ KLL A
Sbjct: 188 APIYKYLKSSKGGLFGDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLLDA 244
>IMGA|Medtr4g156860.1 Glutathione peroxidase
chr04_pseudomolecule_IMGAG_V3 38944183-38947614 F
EGN_Mt090430 20090702
Length = 167
Score = 238 bits (608), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 108/162 (66%), Positives = 134/162 (82%)
Query: 73 TEKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYTELSHIYEKYKTQGFE 132
+ K+I+D+TVKDI GN V LS+++GKVLL+VNVAS+CGLT +NY EL+ +Y+KYK Q FE
Sbjct: 5 SSKSIYDFTVKDISGNDVSLSQYRGKVLLVVNVASQCGLTQTNYKELNVLYQKYKDQDFE 64
Query: 133 ILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFL 192
ILAFPCNQF GQEPGS+ EI+ CTR+KAEFP+FDKV+VNG N P+Y+FLK GG
Sbjct: 65 ILAFPCNQFRGQEPGSSEEIQNVVCTRFKAEFPVFDKVEVNGKNAEPLYKFLKDQKGGIF 124
Query: 193 GDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 234
GD IKWNF KFLV+K GKVV+RY PTT+P +IEKDI+KLL +
Sbjct: 125 GDGIKWNFTKFLVNKEGKVVDRYAPTTAPLKIEKDIEKLLRS 166
>IMGA|Medtr4g149530.2 Glutathione peroxidase
chr04_pseudomolecule_IMGAG_V3 37199276-37197496 F
EGN_Mt090430 20090702
Length = 172
Score = 218 bits (555), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 128/160 (80%)
Query: 75 KTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYTELSHIYEKYKTQGFEIL 134
K+++D+T+KD GN V L+ +KGKVLLIVNVASKCG+T SNY L+ +Y+KYK +G EIL
Sbjct: 12 KSVYDFTLKDGMGNDVDLATYKGKVLLIVNVASKCGMTNSNYVGLNQLYDKYKLKGLEIL 71
Query: 135 AFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGD 194
AFP NQFG +EPG+N +I F CT +K+EFPIFDK++VNG N+AP+Y+FLKS G GD
Sbjct: 72 AFPSNQFGEEEPGTNDQILDFVCTHFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGD 131
Query: 195 LIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 234
I+WNF KFLVDK+G+VV+RY PTTSP +E+DI KLL
Sbjct: 132 DIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDICKLLGV 171
>IMGA|Medtr4g149530.1 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
37199276-37197496 F EGN_Mt090430 20090702
Length = 181
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 122/151 (80%)
Query: 75 KTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYTELSHIYEKYKTQGFEIL 134
K+++D+T+KD GN V L+ +KGKVLLIVNVASKCG+T SNY L+ +Y+KYK +G EIL
Sbjct: 12 KSVYDFTLKDGMGNDVDLATYKGKVLLIVNVASKCGMTNSNYVGLNQLYDKYKLKGLEIL 71
Query: 135 AFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGD 194
AFP NQFG +EPG+N +I F CT +K+EFPIFDK++VNG N+AP+Y+FLKS G GD
Sbjct: 72 AFPSNQFGEEEPGTNDQILDFVCTHFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGD 131
Query: 195 LIKWNFEKFLVDKNGKVVERYPPTTSPFQIE 225
I+WNF KFLVDK+G+VV+RY PTTSP +E
Sbjct: 132 DIQWNFAKFLVDKDGQVVDRYYPTTSPLSLE 162
>IMGA|Medtr5g010450.1 Thioredoxin fold chr05_pseudomolecule_IMGAG_V3
2579001-2576674 E EGN_Mt090430 20090702
Length = 195
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 128/177 (72%), Gaps = 2/177 (1%)
Query: 59 LSKTHSFAVYARAATE-KTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYT 117
L K F++ E K++ D+ VKD G L+ +KGKVLLIVNVAS+CGLT SNY
Sbjct: 11 LGKNKCFSMTPETIGEQKSVFDFYVKDAKGGIANLATYKGKVLLIVNVASQCGLTDSNYA 70
Query: 118 ELSHIYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVDVNGPNT 177
EL+ +Y+KYK QGFEILAFPCNQF QEP ++ +I ++ CTR+ ++FPIF K+ VNG ++
Sbjct: 71 ELNQLYDKYKDQGFEILAFPCNQFRDQEPETSDKIVEYVCTRFGSKFPIFGKIKVNGFHS 130
Query: 178 APVYQFLKSSAGGFL-GDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLA 233
AP+Y+FLKS G + GD I+WNF KFL+DK+G+V RY PTTSP +E DI +LL
Sbjct: 131 APLYKFLKSGKFGVIFGDDIQWNFAKFLIDKDGQVAARYYPTTSPLSLEHDICQLLC 187
>IMGA|Medtr4g149540.4 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
37204088-37200964 E EGN_Mt090430 20090702
Length = 204
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 86/103 (83%)
Query: 69 ARAATEKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYTELSHIYEKYKT 128
A A+ ++IHD+TVKD GN V L +KGKVL+IVNVAS+CGLT SNYTELS +YEKYK+
Sbjct: 68 ASASNPQSIHDFTVKDAKGNDVNLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKS 127
Query: 129 QGFEILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFDKVD 171
+G EILAFPCNQFG QEPGS EI+ F CTR+KAEFP+FDKV+
Sbjct: 128 KGLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVN 170
>IMGA|Medtr1g086710.1 Thioredoxin fold chr01_pseudomolecule_IMGAG_V3
17244869-17244007 H EGN_Mt090430 20090702
Length = 126
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 21/122 (17%)
Query: 70 RAATEKTIHDYTVKDIDGNGVPLSKFKGKVLLIVNVASKCGLTASNYTELSHIYEKYKTQ 129
++ E +IH+Y VKD G V L ++GKVLL+VNVASKC +NYT+L+ +Y KYK
Sbjct: 5 QSVLENSIHEYKVKDARGKEVNLGIYRGKVLLVVNVASKCNFADANYTQLTQLYTKYKEI 64
Query: 130 G---------------------FEILAFPCNQFGGQEPGSNPEIKQFACTRYKAEFPIFD 168
G EIL FPCNQF +EPG++ E + FAC RYKAE+PI
Sbjct: 65 GMHMLFIYLSELMSNIKKILSRLEILGFPCNQFLRKEPGTSQEAQDFACDRYKAEYPILG 124
Query: 169 KV 170
KV
Sbjct: 125 KV 126
>IMGA|Medtr1g086700.1 Glutathione peroxidase
chr01_pseudomolecule_IMGAG_V3 17244005-17243295 E
EGN_Mt090430 20090702
Length = 72
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 170 VDVNGPNTAPVYQFLKSSAGGFLGDL-IKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDI 228
+ VNG +TAPVY++LKS G LG IKWNF KFLVD+ G+V++RY PTT P IE DI
Sbjct: 5 IRVNGQDTAPVYKYLKSQKCGSLGSRRIKWNFTKFLVDEEGRVIQRYSPTTQPLAIENDI 64
Query: 229 QKLL 232
+K L
Sbjct: 65 KKAL 68