Jatropha Genome Database

JcCA0312361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312361.10 + phase: 0 
         (145 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g090170.1 PpiC-type peptidyl-prolyl cis-trans isomera...    63   6e-11
IMGA|Medtr5g096430.1 PpiC-type peptidyl-prolyl cis-trans isomera...    48   2e-06
IMGA|Medtr5g096440.1 PpiC-type peptidyl-prolyl cis-trans isomera...    48   2e-06

>IMGA|Medtr8g090170.1 PpiC-type peptidyl-prolyl cis-trans isomerase
           chr08_pseudomolecule_IMGAG_V3 19593989-19596283 F
           EGN_Mt090430 20090702
          Length = 122

 Score = 62.8 bits (151), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 16/109 (14%)

Query: 46  VKARHILCEKQGKINEAYQKLQDGW-LNNGDK---------------VPPAEFAKLAAEY 89
           V+A HIL + +G   +A  K  +G+ + N  +                  A+F  LA+ Y
Sbjct: 10  VRASHILIKHEGSRRKASWKDPEGYVIKNTTRESAVAILTSMKEDILTGKAKFEDLASRY 69

Query: 90  SECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           S+C S K+GGDLG F RG+M  PF++  +   +G  S    S  G H+I
Sbjct: 70  SDCSSAKRGGDLGSFGRGQMQKPFEDATYALQVGEISDIVDSDSGSHII 118


>IMGA|Medtr5g096430.1 PpiC-type peptidyl-prolyl cis-trans isomerase;
           Rhodanese-like chr05_pseudomolecule_IMGAG_V3
           38313275-38308311 E EGN_Mt090430 20090702
          Length = 291

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 81  EFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           + + LA E+S CPS  +GG LGW  +G+M   F+E AF+ P+       K+  G+H++
Sbjct: 113 DLSDLAVEHSICPSKDEGGMLGWVRKGQMVPEFEEAAFSAPLNKI-VRCKTQFGWHLL 169


>IMGA|Medtr5g096440.1 PpiC-type peptidyl-prolyl cis-trans isomerase;
           Rhodanese-like chr05_pseudomolecule_IMGAG_V3
           38318846-38315244 E EGN_Mt090430 20090702
          Length = 323

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 81  EFAKLAAEYSECPSGKKGGDLGWFPRGKMAGP-FQEVAFNTPIGATSAPFKSTHGYHVI 138
           + + LA +YS CPS ++GG LGW  +G+M  P F+E  F+ P+       K+  G+H++
Sbjct: 114 DLSDLAVDYSVCPSKEEGGRLGWVRKGQMLVPEFEEAVFSAPLNKVVM-CKTKFGWHLL 171