Jatropha Genome Database

JcCA0312321.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312321.40 + phase: 0 
         (207 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g107920.1 hypothetical protein chr07_pseudomolecule_I...   109   9e-25
IMGA|Medtr7g108020.1 RecA chr07_pseudomolecule_IMGAG_V3 25341744...   109   1e-24
IMGA|Medtr7g108030.1 hypothetical protein chr07_pseudomolecule_I...   106   7e-24
IMGA|Medtr7g108060.1 hypothetical protein chr07_pseudomolecule_I...   102   9e-23
IMGA|Medtr7g107930.1 hypothetical protein chr07_pseudomolecule_I...    99   1e-21
IMGA|Medtr7g107940.1 hypothetical protein chr07_pseudomolecule_I...    99   1e-21
IMGA|Medtr3g026470.1 hypothetical protein chr03_pseudomolecule_I...    89   2e-18

>IMGA|Medtr7g107920.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 25310818-25309213 E
           EGN_Mt090430 20090702
          Length = 267

 Score =  109 bits (273), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 73/106 (68%), Gaps = 1/106 (0%)

Query: 23  IPAWEKQFCFAVGGIRWQDFLRAKKYASEFTKIMEWDDSAGKESFYNAKSRFWAKNGGLP 82
           +P WEK+FC ++G + W+  +  K+Y S    ++ WDDSA KE+F NAK+RFWA+  GLP
Sbjct: 7   VPLWEKKFCASIGAVPWRKLIEVKRYMSLHPNVVNWDDSAVKEAFNNAKNRFWAEINGLP 66

Query: 83  FKTPLPSPDIYIDRIDWTAKLDSQLLLDLEKARIYQVRDYEKETEK 128
              PLP P+IY+D +DW A +D +L LD+E+  + + R+ E++ E+
Sbjct: 67  CDIPLPDPNIYLDDVDWNATIDPELYLDVEREAVAR-RNIEEKGEE 111


>IMGA|Medtr7g108020.1 RecA chr07_pseudomolecule_IMGAG_V3
           25341744-25338367 E EGN_Mt090430 20090702
          Length = 303

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 65/91 (71%)

Query: 23  IPAWEKQFCFAVGGIRWQDFLRAKKYASEFTKIMEWDDSAGKESFYNAKSRFWAKNGGLP 82
           +P+WEK+FC +VG + W+  +   KY     K++ W+DSA KE+F NAK+RFWA+  GLP
Sbjct: 34  VPSWEKKFCNSVGSVPWRKVIEGNKYMCLHPKVVNWNDSAVKEAFDNAKNRFWAEINGLP 93

Query: 83  FKTPLPSPDIYIDRIDWTAKLDSQLLLDLEK 113
              PLP P+IYID +DW A +DS+L L++E+
Sbjct: 94  CNIPLPDPNIYIDDVDWNASIDSELYLEVER 124


>IMGA|Medtr7g108030.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 25345415-25343134 E
           EGN_Mt090430 20090702
          Length = 289

 Score =  106 bits (265), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 72/110 (65%), Gaps = 1/110 (0%)

Query: 23  IPAWEKQFCFAVGGIRWQDFLRAKKYASEFTKIMEWDDSAGKESFYNAKSRFWAKNGGLP 82
           +P WEK+FC ++G + W+  +  KKY      ++ WDDSA KE+F NAK+RFWA+   +P
Sbjct: 20  VPLWEKKFCASIGSVPWRKIIEVKKYMCLHPNVVNWDDSAVKEAFNNAKNRFWAEINDIP 79

Query: 83  FKTPLPSPDIYIDRIDWTAKLDSQLLLDLEKARIYQVRDYEKETEKDRVL 132
              P P P+IYID IDW A +D++L LD+E+  +   R+ E++ E+  +L
Sbjct: 80  CDIPSPDPNIYIDDIDWNASVDTELYLDVER-EVEACRNIEEKGEEVVIL 128


>IMGA|Medtr7g108060.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 25354586-25352481 E
           EGN_Mt090430 20090702
          Length = 310

 Score =  102 bits (255), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 64/90 (71%)

Query: 23  IPAWEKQFCFAVGGIRWQDFLRAKKYASEFTKIMEWDDSAGKESFYNAKSRFWAKNGGLP 82
           +P WEKQFC +VG + W+  +  K+Y     K++ WDDSA KE+F NAK+R+WA+  G+P
Sbjct: 39  VPLWEKQFCASVGSVPWRKLIEDKRYMYMHPKVVNWDDSAVKEAFDNAKNRYWAEINGIP 98

Query: 83  FKTPLPSPDIYIDRIDWTAKLDSQLLLDLE 112
           +  PLP+P+IYID +D  A +DS+L  D+E
Sbjct: 99  WDIPLPNPNIYIDDVDSNASVDSELHRDVE 128


>IMGA|Medtr7g107930.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 25316962-25312642 E
           EGN_Mt090430 20090702
          Length = 314

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 59/91 (64%)

Query: 23  IPAWEKQFCFAVGGIRWQDFLRAKKYASEFTKIMEWDDSAGKESFYNAKSRFWAKNGGLP 82
           +P WEK+FC +VG + W+  +  KKY      ++ WDDSA KE+F NAK+RFWA+    P
Sbjct: 38  VPLWEKKFCESVGSVPWRKVIEGKKYMYLHPNVVNWDDSAVKEAFDNAKNRFWAEINEFP 97

Query: 83  FKTPLPSPDIYIDRIDWTAKLDSQLLLDLEK 113
              PLP PD +ID +DW A +D +L  D+E+
Sbjct: 98  CDIPLPDPDTHIDDVDWNASVDPELYQDVER 128


>IMGA|Medtr7g107940.1 hypothetical protein
           chr07_pseudomolecule_IMGAG_V3 25321988-25319363 E
           EGN_Mt090430 20090702
          Length = 312

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 16/132 (12%)

Query: 23  IPAWEKQFCFAVGGIRWQDFLRAKKYASEFTKIMEWDDSAGKESFYNAKSRFWAKNGGLP 82
           +P WEK+FC  VG + W+  +  K++      ++ WDDSA KE+F NAK+RFWA   G P
Sbjct: 38  VPWWEKKFCATVGSVSWKKVIEGKRFMFLHPTVINWDDSAVKEAFDNAKNRFWADINGFP 97

Query: 83  FKTPLPSPDIYIDRIDWTAKLDSQLLLDLEKARIYQVRDYEKETEKDRVLLKD------- 135
              PLP P+I+ID +D TA +D QL LD+E     +  D   E ++D  L+ D       
Sbjct: 98  CDIPLPDPNIHIDDVDSTASVDPQLYLDVESE--AEASD-NMEEKRDVTLIIDNSLLVKK 154

Query: 136 ------IKPTGW 141
                 I PTGW
Sbjct: 155 SFADLGIVPTGW 166


>IMGA|Medtr3g026470.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 7137943-7133332 E
           EGN_Mt090430 20090702
          Length = 397

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 1/103 (0%)

Query: 23  IPAWEKQFCFAVGGIRWQDFLRAKKYASEFTKIMEWDDSAGKESFYNAKSRFWAKNGGLP 82
           IP WEK++C   G + WQ  + +K+       +++W DS  +E+F NAK R+WA    LP
Sbjct: 64  IPVWEKKYCTLSGCVPWQKIVDSKELIYCHHNVLDWKDSGAEEAFQNAKKRYWANVNNLP 123

Query: 83  FKTPLPSPDIYIDRIDWTAKLDSQLLLDLEKARIYQVRDYEKE 125
               LP PD YI++IDW   +D++L+ +L+ A  + V D E++
Sbjct: 124 CDISLPDPDAYIEQIDWNPCIDAELIKELDNA-FFTVPDEEEQ 165