Jatropha Genome Database

JcCA0311651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311651.10 + phase: 0 
         (485 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g096380.1 Metallo-dependent hydrolase, composite chr0...   725   0.0  
IMGA|Medtr5g096300.1 Metallo-dependent hydrolase, composite chr0...   703   0.0  
IMGA|Medtr5g096330.1 Zinc finger, SWIM-type chr05_pseudomolecule...   130   2e-30
IMGA|Medtr2g014750.1 Dihydroorotase region chr02_pseudomolecule_...    74   2e-13
IMGA|Medtr2g014750.3 Metallo-dependent hydrolase, composite chr0...    73   3e-13
IMGA|Medtr2g014750.2 Urease, gamma/beta/alpha type chr02_pseudom...    59   6e-09

>IMGA|Medtr5g096380.1 Metallo-dependent hydrolase, composite
           chr05_pseudomolecule_IMGAG_V3 38291047-38296530 E
           EGN_Mt090430 20090702
          Length = 529

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/451 (79%), Positives = 389/451 (86%), Gaps = 18/451 (3%)

Query: 28  NQFCEVRSGYDEAGCGIPXXXXXXXXXXXXXTVVNAHQQEVADVFVEDGIIVVVKPNIKV 87
           NQFC    GY E+ CG               TVVNAH Q++ADV+VEDGIIV V P I V
Sbjct: 34  NQFCVAGIGYGESTCGTSSSSSSNKLLIKGGTVVNAHHQQIADVYVEDGIIVAVNPTIAV 93

Query: 88  GDDVYVIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSGQAAALAGGTTMHIDFVIPL 147
           GDDVYVIDA+GKFVMPGGIDPHTHL MEFM+T  +DDFFSGQAAALAGGTTMHIDFVIP 
Sbjct: 94  GDDVYVIDATGKFVMPGGIDPHTHLEMEFMNTVAVDDFFSGQAAALAGGTTMHIDFVIPT 153

Query: 148 NGSLVAGFEAYKKKAKKSCMDYGFHMAVTKWDEVVSREMEIMVKENGINSFKFFMAYKGS 207
           NGSL AGFEAY+KKAKKSCMDYGFHMA+TKWDE VSREME+MVKE GINSFKFFMAYKGS
Sbjct: 154 NGSLTAGFEAYEKKAKKSCMDYGFHMAITKWDETVSREMELMVKEKGINSFKFFMAYKGS 213

Query: 208 LMINDDLLLEGLKQCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLVV 267
           LMI+D+LLLEG K+CKSLGALAMVHAENGDAV+EGQK+MIELGITGPEGHALSRP V   
Sbjct: 214 LMISDELLLEGFKKCKSLGALAMVHAENGDAVYEGQKKMIELGITGPEGHALSRPAV--- 270

Query: 268 LQLEGEATARAIRLASFINTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDS 327
             LEGEATARAIRLA F+NTPLYVVHVMSIDAMEE+A+ARKSGQRVIGEPV+SGL LDDS
Sbjct: 271 --LEGEATARAIRLADFVNTPLYVVHVMSIDAMEEVAKARKSGQRVIGEPVLSGLALDDS 328

Query: 328 KLWDPDFTTASKYVMSPPIRPSGHDKALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFR 387
            LW PDF TA+K             +ALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFR
Sbjct: 329 WLWHPDFDTAAK-------------QALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFR 375

Query: 388 KIPNGVNGIEERMHLLWDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDADI 447
           KIPNGVNGIEERM ++WD MVESGQISVTD+VR+TSTECARIFNIYP+KGAIL GSDADI
Sbjct: 376 KIPNGVNGIEERMRVVWDIMVESGQISVTDYVRLTSTECARIFNIYPKKGAILPGSDADI 435

Query: 448 IILNPNSSFEISARSHHSRTDTNVYEGRRGK 478
           IILNPNSSF+I+A+SHHSR DTNVYEGR+GK
Sbjct: 436 IILNPNSSFDITAKSHHSRVDTNVYEGRKGK 466


>IMGA|Medtr5g096300.1 Metallo-dependent hydrolase, composite
           chr05_pseudomolecule_IMGAG_V3 38265638-38270291 E
           EGN_Mt090430 20090702
          Length = 521

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/458 (74%), Positives = 384/458 (83%), Gaps = 20/458 (4%)

Query: 28  NQFCEVRSGYDEAGCGIPXXXXXXXXXXXXXTVVNAHQQEVADVFVEDGIIVVVKPNIKV 87
           NQFCE      E+ CG               TVVNAH Q VADV+VEDGIIV V+PNI V
Sbjct: 28  NQFCEAGIESGESTCG--TSSSTNKLLIKGGTVVNAHHQHVADVYVEDGIIVAVQPNIMV 85

Query: 88  GDDVYVIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSGQAAALAGGTTMHIDFVIPL 147
           GDDVYVIDA+GKFVMPGGIDPH HL M+ + T ++DDFFSGQ+AALAGGTTMHIDFV+P+
Sbjct: 86  GDDVYVIDATGKFVMPGGIDPHAHLGMDALGTTSVDDFFSGQSAALAGGTTMHIDFVMPI 145

Query: 148 NGSLVAGFEAYKKKAKKSCMDYGFHMAVTKWDEVVSREMEIMVKENGINSFKFFMAYKGS 207
           NG+L AGFEAY+KKAK SCMDYGFH+AVTKWDE VS +MEIMVKE GINSFKFFMAYK  
Sbjct: 146 NGNLTAGFEAYEKKAKNSCMDYGFHVAVTKWDESVSTDMEIMVKEKGINSFKFFMAYKEF 205

Query: 208 LMINDDLLLEGLKQCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLVV 267
           +M+ND+LLL+G K+CKSLGALAMVHAENGDAV+ GQ++MIELGITGPEGH LSRPP+   
Sbjct: 206 IMVNDELLLQGFKKCKSLGALAMVHAENGDAVYAGQQKMIELGITGPEGHPLSRPPM--- 262

Query: 268 LQLEGEATARAIRLASFINTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDS 327
             LEGEAT+RAIRLA F+NTPLYVVHVMSIDAMEEIA+ARKSGQRVIGEP+VSGL LDDS
Sbjct: 263 --LEGEATSRAIRLADFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLALDDS 320

Query: 328 KLWDPDFTTASKYVMSPPIRPSGHDKALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFR 387
            LW PDFTTA+K             +ALQ+AL+TGVLQLVGTDHC +NSTQKA G+DDFR
Sbjct: 321 WLWHPDFTTAAK-------------QALQSALATGVLQLVGTDHCAWNSTQKARGVDDFR 367

Query: 388 KIPNGVNGIEERMHLLWDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDADI 447
           +I NGVNGIEERMH++WD MVESGQISVTD+VRVTSTECARIFNIYPRKGAIL GSDADI
Sbjct: 368 QIINGVNGIEERMHVVWDIMVESGQISVTDYVRVTSTECARIFNIYPRKGAILPGSDADI 427

Query: 448 IILNPNSSFEISARSHHSRTDTNVYEGRRGKVIIFIMI 485
           IILNPNSSFEI+A+SHHSR DTNVYEG +GK  I + I
Sbjct: 428 IILNPNSSFEITAKSHHSRLDTNVYEGWKGKGKIEVTI 465


>IMGA|Medtr5g096330.1 Zinc finger, SWIM-type
           chr05_pseudomolecule_IMGAG_V3 38273853-38277651 E
           EGN_Mt090430 20090702
          Length = 342

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/190 (44%), Positives = 103/190 (54%), Gaps = 69/190 (36%)

Query: 173 MAVTKWDEVVSREMEIMVKENGINSFKFFMAYKGSLMINDDLLLEGLKQCKSLGALAMVH 232
           ++VTKWDEVVS+EMEI+                        LLL+G  +CKSLGALAMVH
Sbjct: 206 ISVTKWDEVVSKEMEIV------------------------LLLQGFTKCKSLGALAMVH 241

Query: 233 AENGDAVFEGQKRMIELGITGPEGHALSRPPVLVVLQLEGEATARAIRLASFINTPLYVV 292
           AENGD V+  Q++MIEL +TG +GH LSR  V     LEGEAT+RAIR        LYVV
Sbjct: 242 AENGDDVYAAQQKMIELRLTGLKGHPLSRCAV-----LEGEATSRAIR--------LYVV 288

Query: 293 HVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTTASKYVMSPPIRPSGHD 352
           +VMSID MEEI +                              TA+K ++    R  G D
Sbjct: 289 YVMSIDVMEEIVK------------------------------TAAKAIL--LFRSQGRD 316

Query: 353 KALQAALSTG 362
           KALQA+L+TG
Sbjct: 317 KALQASLATG 326


>IMGA|Medtr2g014750.1 Dihydroorotase region
           chr02_pseudomolecule_IMGAG_V3 3875358-3865685 E
           EGN_Mt090430 20090702
          Length = 586

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 174/405 (42%), Gaps = 37/405 (9%)

Query: 74  EDGIIVVVKPNIKVGDDVY-VIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSGQAAA 132
           E  I+ +V+   K  + V+ VID     VMPG ID H HL  +       + F +G  AA
Sbjct: 148 EGKIVSIVEGYGKKDNSVHQVIDYGDAVVMPGLIDVHVHL--DEPGRTDWEGFVTGTQAA 205

Query: 133 LAGGTTMHIDFVIPLNG--------SLVAGFEAYKKKAKKSCMDYGFHMAVTKWDEVVSR 184
            AGG T  +D  +PLN         +L    EA + K     +D GF   +   +   + 
Sbjct: 206 AAGGVTTVVD--MPLNNHPTTMSKETLELKLEAAEDKI---YVDVGFWGGLVPENAQNTS 260

Query: 185 EMEIMVKENGINSFKFFMAYKG---SLMINDDLLLEGLKQCKSLGALAMVHAENGDAVFE 241
            +E ++ + G+   K FM   G     M   + + EGL          +VH+E    + +
Sbjct: 261 ILEGLL-DAGVLGLKSFMCPSGIDDFPMTTIEHIKEGLSVLAKYRRPLLVHSE----IQQ 315

Query: 242 GQKRMIELGITG-PEGHAL---SRPPVL--VVLQLEGEATARAIRLASFINTPLYVVHVM 295
             +   EL   G P  +     +RPP      ++   +AT       S     +++VH+ 
Sbjct: 316 DSESSSELEGNGDPHSYKTYLDTRPPSWEEAAIKELVDATKDTRIGGSLEGAHVHIVHLS 375

Query: 296 SIDA-MEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTTASKYVMSPPIRPSGHDKA 354
              A ++ I  A++ G  +  E     L     ++ D D    ++Y  SPPIR + + + 
Sbjct: 376 DSSASLDLIKEAKRRGDSISIETCPHYLTFSSEEIPDKD----TRYKCSPPIRDASNREK 431

Query: 355 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGIEERMHLLWDTMVESGQIS 414
           L  AL  G + L+ +DH       K     DF K   G++ ++  + + W    + G ++
Sbjct: 432 LWEALLDGHIDLLSSDHSPTVPKLKLLKEGDFLKAWGGISSLQFDLPVTWSYGKKHG-LT 490

Query: 415 VTDFVRVTSTECARIFNIYPRKGAILAGSDADIIILNPNSSFEIS 459
           +     + S + A++  +   KGAI  G+ ADI++  P   F+++
Sbjct: 491 LEKLSLLWSQKPAKLAGL-ESKGAIAVGNHADIVVWQPEVEFDLN 534


>IMGA|Medtr2g014750.3 Metallo-dependent hydrolase, composite
           chr02_pseudomolecule_IMGAG_V3 3872068-3865685 E
           EGN_Mt090430 20090702
          Length = 504

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 174/405 (42%), Gaps = 37/405 (9%)

Query: 74  EDGIIVVVKPNIKVGDDVY-VIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSGQAAA 132
           E  I+ +V+   K  + V+ VID     VMPG ID H HL  +       + F +G  AA
Sbjct: 66  EGKIVSIVEGYGKKDNSVHQVIDYGDAVVMPGLIDVHVHL--DEPGRTDWEGFVTGTQAA 123

Query: 133 LAGGTTMHIDFVIPLNG--------SLVAGFEAYKKKAKKSCMDYGFHMAVTKWDEVVSR 184
            AGG T  +D  +PLN         +L    EA + K     +D GF   +   +   + 
Sbjct: 124 AAGGVTTVVD--MPLNNHPTTMSKETLELKLEAAEDKI---YVDVGFWGGLVPENAQNTS 178

Query: 185 EMEIMVKENGINSFKFFMAYKG---SLMINDDLLLEGLKQCKSLGALAMVHAENGDAVFE 241
            +E ++ + G+   K FM   G     M   + + EGL          +VH+E    + +
Sbjct: 179 ILEGLL-DAGVLGLKSFMCPSGIDDFPMTTIEHIKEGLSVLAKYRRPLLVHSE----IQQ 233

Query: 242 GQKRMIELGITG-PEGHAL---SRPPVL--VVLQLEGEATARAIRLASFINTPLYVVHVM 295
             +   EL   G P  +     +RPP      ++   +AT       S     +++VH+ 
Sbjct: 234 DSESSSELEGNGDPHSYKTYLDTRPPSWEEAAIKELVDATKDTRIGGSLEGAHVHIVHLS 293

Query: 296 SIDA-MEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTTASKYVMSPPIRPSGHDKA 354
              A ++ I  A++ G  +  E     L     ++ D D    ++Y  SPPIR + + + 
Sbjct: 294 DSSASLDLIKEAKRRGDSISIETCPHYLTFSSEEIPDKD----TRYKCSPPIRDASNREK 349

Query: 355 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGIEERMHLLWDTMVESGQIS 414
           L  AL  G + L+ +DH       K     DF K   G++ ++  + + W    + G ++
Sbjct: 350 LWEALLDGHIDLLSSDHSPTVPKLKLLKEGDFLKAWGGISSLQFDLPVTWSYGKKHG-LT 408

Query: 415 VTDFVRVTSTECARIFNIYPRKGAILAGSDADIIILNPNSSFEIS 459
           +     + S + A++  +   KGAI  G+ ADI++  P   F+++
Sbjct: 409 LEKLSLLWSQKPAKLAGL-ESKGAIAVGNHADIVVWQPEVEFDLN 452


>IMGA|Medtr2g014750.2 Urease, gamma/beta/alpha type
           chr02_pseudomolecule_IMGAG_V3 3875358-3865685 E
           EGN_Mt090430 20090702
          Length = 537

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 146/350 (41%), Gaps = 35/350 (10%)

Query: 74  EDGIIVVVKPNIKVGDDVY-VIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSGQAAA 132
           E  I+ +V+   K  + V+ VID     VMPG ID H HL  +       + F +G  AA
Sbjct: 148 EGKIVSIVEGYGKKDNSVHQVIDYGDAVVMPGLIDVHVHL--DEPGRTDWEGFVTGTQAA 205

Query: 133 LAGGTTMHIDFVIPLNG--------SLVAGFEAYKKKAKKSCMDYGFHMAVTKWDEVVSR 184
            AGG T  +D  +PLN         +L    EA + K     +D GF   +   +   + 
Sbjct: 206 AAGGVTTVVD--MPLNNHPTTMSKETLELKLEAAEDKI---YVDVGFWGGLVPENAQNTS 260

Query: 185 EMEIMVKENGINSFKFFMAYKG---SLMINDDLLLEGLKQCKSLGALAMVHAENGDAVFE 241
            +E ++ + G+   K FM   G     M   + + EGL          +VH+E    + +
Sbjct: 261 ILEGLL-DAGVLGLKSFMCPSGIDDFPMTTIEHIKEGLSVLAKYRRPLLVHSE----IQQ 315

Query: 242 GQKRMIELGITG-PEGHAL---SRPPVL--VVLQLEGEATARAIRLASFINTPLYVVHVM 295
             +   EL   G P  +     +RPP      ++   +AT       S     +++VH+ 
Sbjct: 316 DSESSSELEGNGDPHSYKTYLDTRPPSWEEAAIKELVDATKDTRIGGSLEGAHVHIVHLS 375

Query: 296 SIDA-MEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTTASKYVMSPPIRPSGHDKA 354
              A ++ I  A++ G  +  E     L     ++ D D    ++Y  SPPIR + + + 
Sbjct: 376 DSSASLDLIKEAKRRGDSISIETCPHYLTFSSEEIPDKD----TRYKCSPPIRDASNREK 431

Query: 355 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGIEERMHLLW 404
           L  AL  G + L+ +DH       K     DF K   G++ ++  + + W
Sbjct: 432 LWEALLDGHIDLLSSDHSPTVPKLKLLKEGDFLKAWGGISSLQFDLPVTW 481