Jatropha Genome Database

JcCA0311161.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311161.20 + phase: 1 /pseudo/partial
         (114 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g100100.1 Phospholipase D/Transphosphatidylase; Pleck...    63   3e-11
IMGA|Medtr1g100110.1 Phospholipase D/Transphosphatidylase; Pleck...    59   6e-10

>IMGA|Medtr1g100100.1 Phospholipase D/Transphosphatidylase;
          Pleckstrin-like, putative chr01_pseudomolecule_IMGAG_V3
          20664565-20665173 E EGN_Mt090430 20090702
          Length = 152

 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 38/44 (86%)

Query: 18 RQFPQLCWIFDELPKATIVSVSKPDTGDISLILLSYTIELQFKQ 61
          RQ  +   IF+ELPKA+IVSVS+P+TG+IS ILLSYTIELQ+KQ
Sbjct: 17 RQCGEPVRIFEELPKASIVSVSRPETGEISPILLSYTIELQYKQ 60


>IMGA|Medtr1g100110.1 Phospholipase D/Transphosphatidylase;
          Pleckstrin homology-type chr01_pseudomolecule_IMGAG_V3
          20665204-20675194 E EGN_Mt090430 20090702
          Length = 1020

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/35 (80%), Positives = 31/35 (88%)

Query: 62 FHWRLVKKASQVLNLHFALKKRAMIEEFHEKQEQV 96
          F WRL KKASQVL L FAL+KRA+IEEFH+KQEQV
Sbjct: 19 FKWRLRKKASQVLYLQFALRKRAIIEEFHDKQEQV 53