Jatropha Genome Database

JcCA0310831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310831.10 - phase: 0 /pseudo/partial/short
         (41 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g013120.1 Protein of unknown function DUF889, eukaryo...    60   2e-10
IMGA|Medtr3g140350.1 Protein of unknown function DUF239, plant c...    60   4e-10
IMGA|Medtr3g140410.1 Protein of unknown function DUF239, plant c...    57   3e-09
IMGA|Medtr3g140330.1 Protein of unknown function DUF239, plant c...    56   5e-09
IMGA|Medtr3g133580.1 Protein of unknown function DUF239, plant c...    55   9e-09
IMGA|Medtr4g137040.1 Protein of unknown function DUF239, plant c...    55   1e-08
IMGA|Medtr7g143030.1 Protein of unknown function DUF239, plant c...    54   2e-08
IMGA|Medtr5g101720.1 Protein of unknown function DUF239, plant c...    52   7e-08
IMGA|Medtr3g140430.1 hypothetical protein chr03_pseudomolecule_I...    51   1e-07
IMGA|Medtr5g086290.1 Protein of unknown function DUF239, plant c...    50   3e-07
IMGA|Medtr3g140390.1 Protein of unknown function DUF239, plant c...    50   3e-07
IMGA|Medtr2g080470.2 Protein of unknown function DUF239, plant c...    50   4e-07
IMGA|Medtr2g080470.1 Protein of unknown function DUF239, plant c...    49   5e-07
IMGA|Medtr8g044200.1 contains similarity to number of, related c...    49   5e-07
IMGA|Medtr1g093250.1 Protein of unknown function DUF239, plant c...    49   9e-07

>IMGA|Medtr6g013120.1 Protein of unknown function DUF889, eukaryote
           chr06_pseudomolecule_IMGAG_V3 2667632-2672912 H
           EGN_Mt090430 20090702
          Length = 458

 Score = 60.1 bits (144), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 28/31 (90%)

Query: 10  LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
           ++ E+GD+IDCVDIYKQPAF HP+LKNH IQ
Sbjct: 90  IKSENGDIIDCVDIYKQPAFDHPVLKNHTIQ 120


>IMGA|Medtr3g140350.1 Protein of unknown function DUF239, plant
          chr03_pseudomolecule_IMGAG_V3 36298593-36300492 H
          EGN_Mt090430 20090702
          Length = 357

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 27/31 (87%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          ++ EDGD+IDCVDIYKQPAF HP LKNH I+
Sbjct: 60 IKSEDGDIIDCVDIYKQPAFDHPALKNHTIK 90


>IMGA|Medtr3g140410.1 Protein of unknown function DUF239, plant
          chr03_pseudomolecule_IMGAG_V3 36319247-36323096 H
          EGN_Mt090430 20090702
          Length = 438

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/31 (67%), Positives = 27/31 (87%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          ++ +DGD+IDCV+IY+QPAF HP LKNH IQ
Sbjct: 67 IRSQDGDIIDCVNIYEQPAFDHPALKNHSIQ 97


>IMGA|Medtr3g140330.1 Protein of unknown function DUF239, plant
           chr03_pseudomolecule_IMGAG_V3 36291666-36294758 H
           EGN_Mt090430 20090702
          Length = 488

 Score = 55.8 bits (133), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/31 (67%), Positives = 26/31 (83%)

Query: 10  LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
           ++ EDGD+IDC++IYKQPAF HP L NH IQ
Sbjct: 110 IKSEDGDIIDCINIYKQPAFDHPALINHTIQ 140


>IMGA|Medtr3g133580.1 Protein of unknown function DUF239, plant
          chr03_pseudomolecule_IMGAG_V3 33870391-33866383 E
          EGN_Mt090430 20090702
          Length = 340

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/28 (78%), Positives = 24/28 (85%)

Query: 13 EDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          + G  IDCVDIYKQPAF HPLLKNHK+Q
Sbjct: 9  KSGYTIDCVDIYKQPAFDHPLLKNHKLQ 36


>IMGA|Medtr4g137040.1 Protein of unknown function DUF239, plant
          chr04_pseudomolecule_IMGAG_V3 33634251-33638573 E
          EGN_Mt090430 20090702
          Length = 416

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
          +Q  DGD+IDCV + KQPAF HP LK+HKIQ+
Sbjct: 52 IQSPDGDIIDCVPVSKQPAFDHPFLKDHKIQM 83


>IMGA|Medtr7g143030.1 Protein of unknown function DUF239, plant
          chr07_pseudomolecule_IMGAG_V3 34229299-34226215 E
          EGN_Mt090430 20090702
          Length = 440

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/33 (66%), Positives = 26/33 (78%)

Query: 8  LVLQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          L ++ +DGD+IDCV   KQPA  HPLLKNHKIQ
Sbjct: 67 LTIESQDGDLIDCVHKRKQPALDHPLLKNHKIQ 99


>IMGA|Medtr5g101720.1 Protein of unknown function DUF239, plant
          chr05_pseudomolecule_IMGAG_V3 40724316-40721978 H
          EGN_Mt090430 20090702
          Length = 328

 Score = 52.0 bits (123), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/31 (64%), Positives = 26/31 (83%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          +Q + G ++DCVDI+KQPAF H LLKNHK+Q
Sbjct: 35 IQTKSGYIVDCVDIHKQPAFDHLLLKNHKLQ 65


>IMGA|Medtr3g140430.1 hypothetical protein
          chr03_pseudomolecule_IMGAG_V3 36327391-36327880 H
          EGN_Mt090430 20090702
          Length = 100

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
          ++ EDGD+IDCV IY QP+  HP LKNH I+V
Sbjct: 67 IRSEDGDIIDCVSIYNQPSLDHPALKNHSIRV 98


>IMGA|Medtr5g086290.1 Protein of unknown function DUF239, plant
          chr05_pseudomolecule_IMGAG_V3 33082750-33087349 H
          EGN_Mt090430 20090702
          Length = 457

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/26 (69%), Positives = 22/26 (84%)

Query: 15 GDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          GD++DC+DI KQP F HPLL NHK+Q
Sbjct: 56 GDLVDCIDIKKQPVFDHPLLTNHKLQ 81


>IMGA|Medtr3g140390.1 Protein of unknown function DUF239, plant
          chr03_pseudomolecule_IMGAG_V3 36309861-36313442 E
          EGN_Mt090430 20090702
          Length = 424

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/31 (64%), Positives = 25/31 (80%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          ++ +DGD+IDCV+IYKQ A  HP LKNH IQ
Sbjct: 51 IRSKDGDIIDCVNIYKQLALDHPALKNHIIQ 81


>IMGA|Medtr2g080470.2 Protein of unknown function DUF239, plant
          chr02_pseudomolecule_IMGAG_V3 18545618-18541355 F
          EGN_Mt090430 20090702
          Length = 426

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/32 (59%), Positives = 25/32 (78%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
          ++  DGD+IDCV +  QPAF HP LK+HKIQ+
Sbjct: 60 IKSPDGDIIDCVHVSHQPAFDHPELKDHKIQM 91


>IMGA|Medtr2g080470.1 Protein of unknown function DUF239, plant
          chr02_pseudomolecule_IMGAG_V3 18545618-18541355 F
          EGN_Mt090430 20090702
          Length = 453

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/31 (61%), Positives = 24/31 (77%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
          ++  DGD+IDCV +  QPAF HP LK+HKIQ
Sbjct: 60 IKSPDGDIIDCVHVSHQPAFDHPELKDHKIQ 90


>IMGA|Medtr8g044200.1 contains similarity to number of, related
          chr08_pseudomolecule_IMGAG_V3 9770366-9771383 H
          EGN_Mt090430 20090702
          Length = 205

 Score = 48.9 bits (115), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
          +Q E G ++DC+DI KQ AF HPLLKNHKIQ+
Sbjct: 48 IQTEFGRIVDCIDINKQLAFDHPLLKNHKIQL 79


>IMGA|Medtr1g093250.1 Protein of unknown function DUF239, plant
           chr01_pseudomolecule_IMGAG_V3 18912401-18918304 E
           EGN_Mt090430 20090702
          Length = 456

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/33 (63%), Positives = 24/33 (72%)

Query: 8   LVLQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
           L ++  DGD+IDCV   KQ A  HPLLKNHKIQ
Sbjct: 74  LTIESPDGDLIDCVHKRKQLALDHPLLKNHKIQ 106