Jatropha Genome Database

JcCA0310371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310371.10 - phase: 0 
         (176 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g136440.1 Expansin 45, endoglucanase-like chr03_pseud...   161   1e-40
IMGA|Medtr3g136440.2 Expansin 45, endoglucanase-like chr03_pseud...   104   2e-23
IMGA|Medtr6g084060.1 Expansin 45, endoglucanase-like chr06_pseud...   102   8e-23
IMGA|Medtr3g136740.1 Expansin 45, endoglucanase-like chr03_pseud...   100   3e-22

>IMGA|Medtr3g136440.1 Expansin 45, endoglucanase-like
           chr03_pseudomolecule_IMGAG_V3 34439543-34432931 E
           EGN_Mt090430 20090702
          Length = 143

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 75/117 (64%), Positives = 92/117 (78%)

Query: 60  SHGDVGTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYLVRCISAV 119
           S  DVGTA+HYSPP+LPTAC+G D SQFPSSN+F +A EGIWDNGAACGR Y VRCISA 
Sbjct: 26  SQADVGTASHYSPPFLPTACFGGDASQFPSSNMFGSAGEGIWDNGAACGRLYEVRCISAA 85

Query: 120 APNTCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNVEFQQ 176
            P TC   + I+++IVDRAQ+SVSRPS +  +++LS  AF  IA+ S S +N+EFQQ
Sbjct: 86  VPRTCIPGQTIQIKIVDRAQSSVSRPSSDDTSMVLSTTAFQIIANVSSSLINIEFQQ 142


>IMGA|Medtr3g136440.2 Expansin 45, endoglucanase-like
           chr03_pseudomolecule_IMGAG_V3 34439543-34432931 E
           EGN_Mt090430 20090702
          Length = 86

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 64/85 (75%)

Query: 92  LFAAASEGIWDNGAACGRQYLVRCISAVAPNTCNREKIIRVRIVDRAQTSVSRPSRNGAT 151
           +F +A EGIWDNGAACGR Y VRCISA  P TC   + I+++IVDRAQ+SVSRPS +  +
Sbjct: 1   MFGSAGEGIWDNGAACGRLYEVRCISAAVPRTCIPGQTIQIKIVDRAQSSVSRPSSDDTS 60

Query: 152 IILSDIAFAQIASPSVSSVNVEFQQ 176
           ++LS  AF  IA+ S S +N+EFQQ
Sbjct: 61  MVLSTTAFQIIANVSSSLINIEFQQ 85


>IMGA|Medtr6g084060.1 Expansin 45, endoglucanase-like
           chr06_pseudomolecule_IMGAG_V3 17310556-17311134 E
           EGN_Mt090430 20090702
          Length = 133

 Score =  102 bits (255), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 4/114 (3%)

Query: 63  DVGTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYLVRCISAVAPN 122
           DVGTA+ Y PPY+PTAC GN   QFP  N+F A +EG+WDNGAACGR+Y +RCIS +   
Sbjct: 23  DVGTASSYGPPYIPTACDGNRRQQFPPGNIFVAVNEGLWDNGAACGRRYRIRCISGIN-K 81

Query: 123 TCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNVEFQQ 176
            C     I V++VD+   + S   +   T  +S  AFA I+    +++NVE+ Q
Sbjct: 82  PCKVGSSIDVKVVDKITCTRSSCHQ---TFHMSTEAFAAISRFPNANINVEYIQ 132


>IMGA|Medtr3g136740.1 Expansin 45, endoglucanase-like
           chr03_pseudomolecule_IMGAG_V3 34581719-34582585 E
           EGN_Mt090430 20090702
          Length = 117

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 4/114 (3%)

Query: 63  DVGTAAHYSPPYLPTACYGNDESQFPSSNLFAAASEGIWDNGAACGRQYLVRCISAVAPN 122
           DVGTA+ Y PPY+PTAC GN   QFP  N+F A +EG+WDNGAACGR+Y VRC+S +   
Sbjct: 7   DVGTASSYGPPYIPTACDGNRRQQFPPGNIFVAVNEGLWDNGAACGRRYRVRCVSGIN-K 65

Query: 123 TCNREKIIRVRIVDRAQTSVSRPSRNGATIILSDIAFAQIASPSVSSVNVEFQQ 176
            C     I V++VD    + S       T  +S  AFA I+    +++NVE+ Q
Sbjct: 66  PCKGGSSIDVKVVDSITCTKSSCPH---TFHMSTEAFAAISRFPNANINVEYIQ 116