Jatropha Genome Database

JcCA0310301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310301.10 + phase: 0 
         (432 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g133710.1 S-adenosylmethionine synthetase chr07_pseud...   751   0.0  
IMGA|Medtr8g134210.1 S-adenosylmethionine synthetase chr08_pseud...   734   0.0  

>IMGA|Medtr7g133710.1 S-adenosylmethionine synthetase
           chr07_pseudomolecule_IMGAG_V3 31361771-31364279 E
           EGN_Mt090430 20090702
          Length = 394

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/392 (92%), Positives = 373/392 (95%), Gaps = 1/392 (0%)

Query: 42  ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA 101
           ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA
Sbjct: 3   ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA 62

Query: 102 KVDYEKIVRQTCRGIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAG 161
            VDYEKIVR TCR IGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEE+GAG
Sbjct: 63  NVDYEKIVRDTCRTIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAG 122

Query: 162 DQGHMFGYATDETPEYMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDNG 221
           DQGHMFGYATDETPE MPL+HVLATKLG++LTEVRKNGTC WLRPDGKTQVT+EYYN+NG
Sbjct: 123 DQGHMFGYATDETPELMPLTHVLATKLGSRLTEVRKNGTCAWLRPDGKTQVTIEYYNENG 182

Query: 222 AMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIG 281
           AMVPVRVHTVLISTQHDETV+ND+IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIG
Sbjct: 183 AMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIG 242

Query: 282 GPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARR 341
           GPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+VRQAAKSIVANGLARR
Sbjct: 243 GPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARR 302

Query: 342 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-R 400
           CIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKENFDFRPGM+TINLDLKRGGN R
Sbjct: 303 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSR 362

Query: 401 FLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 432
           FLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct: 363 FLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 394


>IMGA|Medtr8g134210.1 S-adenosylmethionine synthetase
           chr08_pseudomolecule_IMGAG_V3 32232718-32230045 E
           EGN_Mt090430 20090702
          Length = 421

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/389 (91%), Positives = 365/389 (93%), Gaps = 1/389 (0%)

Query: 42  ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA 101
           ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQD DSKVACETCTKTN+VMVFGEITTKA
Sbjct: 32  ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDVDSKVACETCTKTNLVMVFGEITTKA 91

Query: 102 KVDYEKIVRQTCRGIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAG 161
           KVDYEKIVR TCR IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPEEIGAG
Sbjct: 92  KVDYEKIVRDTCRKIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAG 151

Query: 162 DQGHMFGYATDETPEYMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDNG 221
           DQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNDNG
Sbjct: 152 DQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNG 211

Query: 222 AMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIG 281
           AMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP+KYLD KTIFHLNPSGRFVIG
Sbjct: 212 AMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDSKTIFHLNPSGRFVIG 271

Query: 282 GPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARR 341
           GPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARR
Sbjct: 272 GPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARR 331

Query: 342 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-R 400
           CIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL IVK+NFDFRPGM++INLDL RGGN R
Sbjct: 332 CIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKQNFDFRPGMISINLDLLRGGNGR 391

Query: 401 FLKTAAYGHFGRDDPDFTWEVVKPLKWEK 429
           FLKTAAYGHFGR+D DFTWEVVKPLKWEK
Sbjct: 392 FLKTAAYGHFGREDADFTWEVVKPLKWEK 420