Jatropha Genome Database

JcCA0310141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310141.10 - phase: 0 /pseudo
         (142 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC202568_18.1 Heavy metal transport/detoxification protein ...    77   3e-15
IMGA|AC225519_21.1 Heavy metal transport/detoxification protein ...    77   3e-15
IMGA|Medtr7g123850.1 Heavy metal transport/detoxification protei...    50   3e-07
IMGA|AC235487_8.1 Heavy metal transport/detoxification protein A...    50   4e-07
IMGA|Medtr5g077800.1 Heavy metal transport/detoxification protei...    48   1e-06
IMGA|Medtr1g099270.1 Heavy metal transport/detoxification protei...    45   8e-06
IMGA|Medtr3g150810.1 Heavy metal transport/detoxification protei...    45   1e-05

>IMGA|AC202568_18.1 Heavy metal transport/detoxification protein
          AC202568.9 85002-86374 H EGN_Mt090430 20090702
          Length = 218

 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 14 EEKEAD--EIITAVYRVNLHCEQCARDIKNPLMRTRGVHNVDFDIDKSEIKVEGVIDVIK 71
          EEK+ D  E+ITA+Y++NLHC++C   IK  L+ T+GV  V+ +I+K EIK +G +D +K
Sbjct: 19 EEKKKDDIELITAIYKLNLHCQECGNKIKKHLLTTQGVQAVEMNIEKGEIKAKGKLDPLK 78

Query: 72 VHKQIEKFSQRKVELVT 88
          + K IEK S  KVEL++
Sbjct: 79 ILKLIEKKSNNKVELIS 95


>IMGA|AC225519_21.1 Heavy metal transport/detoxification protein
          AC225519.5 92933-94445 H EGN_Mt090430 20090702
          Length = 265

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 14 EEKEAD--EIITAVYRVNLHCEQCARDIKNPLMRTRGVHNVDFDIDKSEIKVEGVIDVIK 71
          EEK+ D  E+ITA+Y++NLHC++C   IK  L+ T+GV  V+ +I+K EIK +G +D +K
Sbjct: 19 EEKKKDDIELITAIYKLNLHCQECGNKIKKHLLTTQGVQAVEMNIEKGEIKAKGKLDPLK 78

Query: 72 VHKQIEKFSQRKVELVT 88
          + K IEK S  KVEL++
Sbjct: 79 ILKLIEKKSNNKVELIS 95


>IMGA|Medtr7g123850.1 Heavy metal transport/detoxification protein
           chr07_pseudomolecule_IMGAG_V3 28916962-28919002 E
           EGN_Mt090430 20090702
          Length = 349

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 52/95 (54%)

Query: 10  MVSKEEKEADEIITAVYRVNLHCEQCARDIKNPLMRTRGVHNVDFDIDKSEIKVEGVIDV 69
           M  K+E + D+I + V +++LHCE C + IK  +    GV +V  D   +++ V G +D 
Sbjct: 1   MGQKDEMKNDDIPSVVLKLDLHCEGCVKKIKRAVRHFDGVEDVKADTPNNKLTVIGKVDP 60

Query: 70  IKVHKQIEKFSQRKVELVTQVKIKDETKEVQEAKQ 104
            KV  ++ +  ++KVELV+  + K +     +  Q
Sbjct: 61  HKVRDKLAEKIKKKVELVSSPQPKKDDPAAADKPQ 95


>IMGA|AC235487_8.1 Heavy metal transport/detoxification protein
           AC235487.1 51831-53181 H EGN_Mt090430 20090702
          Length = 343

 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 49/75 (65%), Gaps = 1/75 (1%)

Query: 13  KEEKEADEIITAVYRVNLHCEQCARDIKNPLMRTRGVHNVDFDIDKSEIKVEGVIDVIKV 72
           K+ KE   + TAV ++ LHC+ C   I+  +++T+GV +V  D +K  + V+G +D+  +
Sbjct: 159 KKPKEP-PVTTAVLKLELHCQGCTEKIRKTVLKTKGVQHVTIDKEKEIVTVKGTMDMKVL 217

Query: 73  HKQIEKFSQRKVELV 87
            ++++K  +RKVE+V
Sbjct: 218 VEKLKKRFKRKVEVV 232


>IMGA|Medtr5g077800.1 Heavy metal transport/detoxification protein
           chr05_pseudomolecule_IMGAG_V3 28700988-28704346 E
           EGN_Mt090430 20090702
          Length = 322

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 40/64 (62%)

Query: 28  VNLHCEQCARDIKNPLMRTRGVHNVDFDIDKSEIKVEGVIDVIKVHKQIEKFSQRKVELV 87
           V+LHC  CA+ I+  +M+ RGV  V  D+ K+E+ ++G+++   +   I K ++R+  ++
Sbjct: 59  VDLHCVGCAKKIQRSIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICNTITKKTKRRANVI 118

Query: 88  TQVK 91
           + + 
Sbjct: 119 SPLP 122


>IMGA|Medtr1g099270.1 Heavy metal transport/detoxification protein
          chr01_pseudomolecule_IMGAG_V3 20246706-20249255 E
          EGN_Mt090430 20090702
          Length = 577

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 20 EIITAVYRVNLHCEQCARDIKNPLMRTRGVHNVDFDIDKSEIKVEGVIDVIKVHKQIEKF 79
          +I   + +VN+HCE C + +K  L +  GV++V+ D ++ ++ V G +D  K+ K++ K 
Sbjct: 8  KIQNCLLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKL-KS 66

Query: 80 SQRKVEL 86
          S +  EL
Sbjct: 67 SGKHAEL 73


>IMGA|Medtr3g150810.1 Heavy metal transport/detoxification protein
           chr03_pseudomolecule_IMGAG_V3 39798953-39800275 E
           EGN_Mt090430 20090702
          Length = 266

 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 25  VYRVNLHCEQCARDIKNPLMRTRGVHNVDFDIDKSEIKVEG-VIDVIKVHKQIEKFSQRK 83
           + RV +HCE CAR ++  L    GV  V  D     + V+G   + +KV ++++K S RK
Sbjct: 37  LLRVFMHCEGCARKVRRSLKDFPGVEEVITDCKSHMVVVKGEKAEPLKVLERVQKKSHRK 96

Query: 84  VELVTQVKIKDETKEVQE 101
           VEL++ + I  E +++ E
Sbjct: 97  VELLSPIPIAPEEEKIVE 114