Jatropha Genome Database
- JcCA0310021.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0310021.20 + phase: 1 /partial
(237 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g103000.1 Helix-loop-helix DNA-binding chr01_pseudomo... 133 7e-32
IMGA|Medtr7g134210.1 Helix-loop-helix DNA-binding chr07_pseudomo... 129 1e-30
IMGA|Medtr7g134730.1 Helix-loop-helix DNA-binding chr07_pseudomo... 110 8e-25
IMGA|Medtr1g024210.1 Helix-loop-helix DNA-binding chr01_pseudomo... 84 7e-17
IMGA|Medtr5g016950.1 Helix-loop-helix DNA-binding chr05_pseudomo... 84 8e-17
IMGA|Medtr7g118010.1 Helix-loop-helix DNA-binding chr07_pseudomo... 83 1e-16
IMGA|Medtr5g041500.1 Helix-loop-helix DNA-binding chr05_pseudomo... 74 5e-14
IMGA|Medtr8g145720.2 Helix-loop-helix DNA-binding chr08_pseudomo... 70 7e-13
IMGA|Medtr8g145720.1 Helix-loop-helix DNA-binding chr08_pseudomo... 70 8e-13
IMGA|Medtr1g135070.1 Helix-loop-helix DNA-binding chr01_pseudomo... 66 1e-11
IMGA|Medtr5g005270.1 Helix-loop-helix DNA-binding chr05_pseudomo... 65 3e-11
IMGA|Medtr5g005100.1 Helix-loop-helix DNA-binding chr05_pseudomo... 65 3e-11
IMGA|Medtr5g038250.1 Helix-loop-helix DNA-binding chr05_pseudomo... 64 6e-11
IMGA|Medtr1g103000.2 Helix-loop-helix DNA-binding chr01_pseudomo... 64 9e-11
IMGA|Medtr4g095870.1 Helix-loop-helix DNA-binding chr04_pseudomo... 64 1e-10
IMGA|Medtr3g162340.1 Helix-loop-helix DNA-binding chr03_pseudomo... 62 2e-10
IMGA|Medtr8g074580.1 Helix-loop-helix DNA-binding chr08_pseudomo... 61 6e-10
IMGA|Medtr5g086970.1 Helix-loop-helix DNA-binding chr05_pseudomo... 60 7e-10
IMGA|AC235009_5.1 Helix-loop-helix DNA-binding AC235009.1 19047-... 60 8e-10
IMGA|Medtr1g135080.1 Helix-loop-helix DNA-binding chr01_pseudomo... 60 8e-10
IMGA|AC235006_4.1 Peptidase S8 and S53, subtilisin, kexin, sedol... 60 9e-10
IMGA|Medtr1g023470.1 Helix-loop-helix DNA-binding chr01_pseudomo... 59 2e-09
IMGA|Medtr1g023200.1 Helix-loop-helix DNA-binding chr01_pseudomo... 59 2e-09
IMGA|Medtr8g077090.1 Helix-loop-helix DNA-binding chr08_pseudomo... 59 2e-09
IMGA|Medtr4g152040.1 Helix-loop-helix DNA-binding chr04_pseudomo... 59 2e-09
IMGA|Medtr8g012630.2 Helix-loop-helix DNA-binding chr08_pseudomo... 58 3e-09
IMGA|Medtr8g012630.1 Helix-loop-helix DNA-binding chr08_pseudomo... 58 3e-09
IMGA|Medtr7g111170.1 Helix-loop-helix DNA-binding chr07_pseudomo... 58 4e-09
IMGA|Medtr1g135060.1 Helix-loop-helix DNA-binding chr01_pseudomo... 58 5e-09
IMGA|Medtr3g030690.1 Helix-loop-helix DNA-binding chr03_pseudomo... 57 6e-09
IMGA|Medtr3g030690.2 Helix-loop-helix DNA-binding chr03_pseudomo... 57 7e-09
IMGA|Medtr8g078570.1 Helix-loop-helix DNA-binding chr08_pseudomo... 56 1e-08
IMGA|Medtr1g071420.1 Helix-loop-helix DNA-binding chr01_pseudomo... 55 2e-08
IMGA|Medtr2g117830.1 Helix-loop-helix DNA-binding chr02_pseudomo... 55 3e-08
IMGA|Medtr5g014800.1 Helix-loop-helix DNA-binding chr05_pseudomo... 55 3e-08
IMGA|Medtr4g121940.1 Helix-loop-helix DNA-binding chr04_pseudomo... 55 3e-08
IMGA|Medtr1g086480.1 Helix-loop-helix DNA-binding chr01_pseudomo... 55 3e-08
IMGA|Medtr7g111200.1 Helix-loop-helix DNA-binding chr07_pseudomo... 55 4e-08
IMGA|Medtr3g029710.1 Helix-loop-helix DNA-binding chr03_pseudomo... 55 4e-08
IMGA|Medtr5g014820.1 Helix-loop-helix DNA-binding chr05_pseudomo... 54 5e-08
IMGA|Medtr8g102390.1 Helix-loop-helix DNA-binding chr08_pseudomo... 54 6e-08
IMGA|Medtr2g042780.1 Helix-loop-helix DNA-binding chr02_pseudomo... 54 6e-08
IMGA|Medtr2g010480.1 Helix-loop-helix DNA-binding chr02_pseudomo... 54 9e-08
IMGA|Medtr4g142590.1 Helix-loop-helix DNA-binding chr04_pseudomo... 54 9e-08
IMGA|Medtr8g102510.1 Helix-loop-helix DNA-binding chr08_pseudomo... 53 1e-07
IMGA|Medtr7g015360.1 Helix-loop-helix DNA-binding chr07_pseudomo... 52 2e-07
IMGA|Medtr2g046170.2 Helix-loop-helix DNA-binding chr02_pseudomo... 52 3e-07
IMGA|Medtr2g046170.1 Helix-loop-helix DNA-binding chr02_pseudomo... 52 3e-07
IMGA|Medtr1g147140.1 Helix-loop-helix DNA-binding chr01_pseudomo... 51 6e-07
IMGA|Medtr8g102380.1 Helix-loop-helix DNA-binding chr08_pseudomo... 50 7e-07
IMGA|Medtr2g127350.1 Helix-loop-helix DNA-binding chr02_pseudomo... 50 7e-07
IMGA|Medtr1g083450.1 Helix-loop-helix DNA-binding chr01_pseudomo... 50 8e-07
IMGA|Medtr1g083450.2 Helix-loop-helix DNA-binding chr01_pseudomo... 50 8e-07
IMGA|Medtr5g014710.1 Helix-loop-helix DNA-binding chr05_pseudomo... 50 9e-07
IMGA|Medtr3g147680.1 Helix-loop-helix DNA-binding chr03_pseudomo... 49 2e-06
IMGA|Medtr4g006510.1 Helix-loop-helix DNA-binding chr04_pseudomo... 49 2e-06
IMGA|Medtr4g006370.1 Helix-loop-helix DNA-binding chr04_pseudomo... 49 2e-06
IMGA|Medtr8g102360.1 Helix-loop-helix DNA-binding chr08_pseudomo... 48 4e-06
IMGA|Medtr2g127330.1 Helix-loop-helix DNA-binding chr02_pseudomo... 47 8e-06
IMGA|AC233682_19.1 Helix-loop-helix DNA-binding AC233682.2 73932... 47 8e-06
IMGA|Medtr5g014770.1 Helix-loop-helix DNA-binding chr05_pseudomo... 47 9e-06
IMGA|Medtr7g096910.1 Helix-loop-helix DNA-binding chr07_pseudomo... 47 1e-05
>IMGA|Medtr1g103000.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 21335912-21331478 E
EGN_Mt090430 20090702
Length = 721
Score = 133 bits (335), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 98/147 (66%), Gaps = 9/147 (6%)
Query: 5 ASASVCSLGASN---DLSYSSLKTITEDMGRMTSENEHAEDQQV--PKPASAR--AGAKR 57
AS+SVCS ++ D LK + D +E ED+ V K A+ R AG+KR
Sbjct: 407 ASSSVCSGNGADRGSDDPNRDLKRKSRDTEDSECHSEDVEDESVGVKKGAAGRGVAGSKR 466
Query: 58 RPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSM 117
VH+LSER+RR +IN+KMR LQ L+PN +KVDKAS+LD AIEYLKTLQLQVQ+MSM
Sbjct: 467 SRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSM 526
Query: 118 GSRFWMPQMMLPNAMQQIH--NLAHFS 142
G+ +MPQMMLP MQ +H ++A FS
Sbjct: 527 GAGLYMPQMMLPAGMQHMHAPHMAAFS 553
>IMGA|Medtr7g134210.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 31626898-31629047 E
EGN_Mt090430 20090702
Length = 373
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 118/200 (59%), Gaps = 21/200 (10%)
Query: 7 ASVCSLGASNDLSYSSLKTITE-DMGRMTSENEHAEDQQVPKPASARAGAKRRPTPR--- 62
+SVCSL ASNDL++ K+ + D S+N+ + + K R G + + + R
Sbjct: 152 SSVCSLEASNDLNFGVRKSHEDTDDSPYLSDNDEETQENIVKEKPVREGNRVKRSYRNAK 211
Query: 63 VHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFW 122
VH+LSERKRR KIN+K+R L+ L+PN +K+DKAS+LD+AI+YLKTL+LQ+QIMSMG
Sbjct: 212 VHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMGRALC 271
Query: 123 MPQ---MMLP--NAMQQIHNLAHFSPMGIR---------MGMGVGSFQNPAV--LGFPAR 166
MP MMLP + ++ A MG R MG GV + N V GF +
Sbjct: 272 MPLNHFMMLPAHHMNMNMNMNAQHLMMGFRPHVQFPIPQMGDGVTNNNNDRVQMFGFSNQ 331
Query: 167 ILPMQMSVPQPPFLPFVGGG 186
LP QMS+P PF+P + G
Sbjct: 332 -LPPQMSIPNAPFIPPIIGN 350
>IMGA|Medtr7g134730.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 31900725-31897291 E
EGN_Mt090430 20090702
Length = 682
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 101/160 (63%), Gaps = 13/160 (8%)
Query: 5 ASASVCS---LGASNDLSYSSLKTITEDMGRMTSENEHAEDQQ--VPKPASARA--GAKR 57
AS+SVCS + S+D + +LK D +E ED+ V + R G+K+
Sbjct: 368 ASSSVCSDNGVHRSSDDANQNLKRKNLDSEDSEWHSEDFEDESIGVKRTDHGRGVTGSKK 427
Query: 58 RPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSM 117
+ VH+LSER+RR +IN++MR LQ L+PN +K DKAS+LD AIEYLK+LQLQ+QIMSM
Sbjct: 428 NRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQLQIMSM 487
Query: 118 -GSRFWMPQMMLPNAMQQIHNLAH---FSPMGIRMGMGVG 153
G +MP M LP MQ +H AH FSPM + M MG+G
Sbjct: 488 GGGGLYMP-MTLPAGMQHMH-AAHMFPFSPMSVAMQMGLG 525
>IMGA|Medtr1g024210.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 5662294-5664363 H
EGN_Mt090430 20090702
Length = 267
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 34 TSENEHAEDQQVPKPASA---RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSD 90
+S ++ E ++P +A R+ +KR H+LSE++RR KIN+K++ LQ L+PNS+
Sbjct: 63 SSSAQNDEGSELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSN 122
Query: 91 KVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQMML 128
K DKAS+LD AIEYLK LQLQVQ++ + + + + M L
Sbjct: 123 KTDKASMLDEAIEYLKQLQLQVQMLMVRNGYSLHPMSL 160
>IMGA|Medtr5g016950.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 6037873-6040692 E
EGN_Mt090430 20090702
Length = 344
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 15/122 (12%)
Query: 62 RVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRF 121
VH+LSE++RR +IN+KM+ LQ L+PNS+K DKAS+LD AIEYLK LQLQVQ++S+ +
Sbjct: 114 EVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGL 173
Query: 122 WMPQMMLPNAMQQIHNLAHFSPMGIRMGMGVGSFQNPAVLGFPARILPMQMSVPQPPFLP 181
+ M + +H+L S M + G GS NP L M ++P P P
Sbjct: 174 SLHPMYF---HEGLHSLP-LSRMSTELSEGNGS--NP---------LNMTSTLPHPQDNP 218
Query: 182 FV 183
+
Sbjct: 219 LL 220
>IMGA|Medtr7g118010.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 27689442-27693888 E
EGN_Mt090430 20090702
Length = 521
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 68/116 (58%), Gaps = 9/116 (7%)
Query: 24 KTITEDMGRMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQ 83
K I + SE+ E + K S + KR VH+LSER+RR +IN+KM+ LQ
Sbjct: 224 KGIEAEEWEYQSEDVDFESAEAKKNISG-SSTKRSRAAEVHNLSERRRRDRINEKMKALQ 282
Query: 84 ALLPNSDKVDKASVLDNAIEYLKTLQLQV------QIMSMGSRFWMPQMMLPNAMQ 133
L+P S+K DKAS+LD AI+YLK+LQLQV Q+MSMG M MM P Q
Sbjct: 283 ELIPRSNKSDKASMLDEAIDYLKSLQLQVQRVQLMQMMSMGC--GMVPMMFPGIQQ 336
>IMGA|Medtr5g041500.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 17756948-17764063 E
EGN_Mt090430 20090702
Length = 492
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%)
Query: 56 KRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
KR +H+ SERKRR KIN++M+ LQ L+PNS K DKAS+LD IEYLK LQ QV ++
Sbjct: 300 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVNMV 359
Query: 116 S 116
+
Sbjct: 360 N 360
>IMGA|Medtr8g145720.2 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 35494532-35490796 E
EGN_Mt090430 20090702
Length = 400
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQI 114
A+R HS++ER RR +I ++M+ LQ L+PN++K DKAS+LD I+Y+K LQ+QV++
Sbjct: 198 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKV 257
Query: 115 MSM 117
+SM
Sbjct: 258 LSM 260
>IMGA|Medtr8g145720.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 35494532-35490796 E
EGN_Mt090430 20090702
Length = 403
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQI 114
A+R HS++ER RR +I ++M+ LQ L+PN++K DKAS+LD I+Y+K LQ+QV++
Sbjct: 201 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKV 260
Query: 115 MSM 117
+SM
Sbjct: 261 LSM 263
>IMGA|Medtr1g135070.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 30099373-30097897 E
EGN_Mt090430 20090702
Length = 287
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 27 TEDMGRMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALL 86
+ +G + S + ++ + PK ++ A P S+ RKRR +IN+++R LQ L+
Sbjct: 171 VDSIGGIISSSLSPKEHEAPK-LGRKSRAASSPATDAQSIYARKRRERINERLRILQTLV 229
Query: 87 PNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQMMLPNAMQQIHNLAHFSP 143
PN KVD +++L+ A++Y+K LQLQ++++S WM + N M +L+ SP
Sbjct: 230 PNGTKVDISTMLEEAVQYVKFLQLQIKLLS-SEDMWMYAPIAYNGMNIGLDLSFSSP 285
>IMGA|Medtr5g005270.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 104132-105908 E
EGN_Mt090430 20090702
Length = 331
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 50 SARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQ 109
S ++ + R P SL RKRR +IN++++ LQ L+PN KVD +++L+ A++Y+K LQ
Sbjct: 221 SGKSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
Query: 110 LQVQIMSMGSRFWMPQMMLPNAM 132
LQ++++S WM + N M
Sbjct: 281 LQIKLLSSDDT-WMYSPIAYNGM 302
>IMGA|Medtr5g005100.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 38628-36852 E EGN_Mt090430
20090702
Length = 331
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 50 SARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQ 109
S ++ + R P SL RKRR +IN++++ LQ L+PN KVD +++L+ A++Y+K LQ
Sbjct: 221 SGKSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
Query: 110 LQVQIMSMGSRFWMPQMMLPNAM 132
LQ++++S WM + N M
Sbjct: 281 LQIKLLSSDDT-WMYSPIAYNGM 302
>IMGA|Medtr5g038250.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 16152707-16150007 E
EGN_Mt090430 20090702
Length = 239
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 24 KTITEDMGRMTSENEHAE---DQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMR 80
KT G S +HAE D+ PK A+R HSL+ER RR KI+++M+
Sbjct: 80 KTSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMK 139
Query: 81 ELQALLPNSDKV-DKASVLDNAIEYLKTLQLQVQIMSM 117
LQ L+P +KV KA VLD I Y+++L QV+ +SM
Sbjct: 140 TLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSM 177
>IMGA|Medtr1g103000.2 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 21335912-21332993 E
EGN_Mt090430 20090702
Length = 555
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 5 ASASVCSLGASN---DLSYSSLKTITEDMGRMTSENEHAEDQQV--PKPASAR--AGAKR 57
AS+SVCS ++ D LK + D +E ED+ V K A+ R AG+KR
Sbjct: 407 ASSSVCSGNGADRGSDDPNRDLKRKSRDTEDSECHSEDVEDESVGVKKGAAGRGVAGSKR 466
Query: 58 RPTPRVHSLSERKRRHKINKKMRELQALLPNSDKV 92
VH+LSER+RR +IN+KMR LQ L+PN +KV
Sbjct: 467 SRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 501
>IMGA|Medtr4g095870.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 20044942-20047220 E
EGN_Mt090430 20090702
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 27 TEDMGRMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALL 86
+D+G + EN + Q KP A+R HSL+ER RR KI+++M+ LQ L+
Sbjct: 119 CDDVG--SKENSKGSEIQNHKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLV 176
Query: 87 PNSDKV-DKASVLDNAIEYLKTLQLQVQIMSM 117
P +K+ KA +LD I Y+++LQ QV+ +SM
Sbjct: 177 PGCNKIAGKAGMLDEIINYVQSLQRQVEFLSM 208
>IMGA|Medtr3g162340.1 Helix-loop-helix DNA-binding
chr03_pseudomolecule_IMGAG_V3 42378704-42382158 E
EGN_Mt090430 20090702
Length = 398
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 46/204 (22%)
Query: 26 ITEDMGRMTSENEHAEDQQVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQAL 85
+ ED + EN D V K A+R HSL+ER RR KI+++M+ LQ L
Sbjct: 167 VAEDTSN-SKENSKVSD--VQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 223
Query: 86 LPNSDKVD-KASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQM-----------MLPNAMQ 133
+P +K+ KA +LD I Y+++LQ QV+ +SM P++ + PN
Sbjct: 224 VPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCDA 283
Query: 134 QIHNLAHFSPMGIRMGMGVGSFQNPAVLGFPARILPMQMSVPQPPFLPFVGGGGSSMLHP 193
A F MG+ G+ NP +Q + PQ F+P+ GG + ++P
Sbjct: 284 N----ASFQAMGMSTGLNSN---NPY----------LQFNSPQ-QFVPY--GGLDAGMNP 323
Query: 194 SVPVTANSGIATPMGQIRGNSAPL 217
S MG R SAP+
Sbjct: 324 S-----------DMGLRRSISAPV 336
>IMGA|Medtr8g074580.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 14863281-14866639 F
EGN_Mt090430 20090702
Length = 278
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKV-DKASVLDNAIEYLKTLQLQVQ 113
A+R HSL+ER RR KI+++M+ LQ L+P +KV KA VLD I Y+++LQ QV+
Sbjct: 153 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
Query: 114 IMSM 117
+SM
Sbjct: 213 FLSM 216
>IMGA|Medtr5g086970.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 33511786-33513858 E
EGN_Mt090430 20090702
Length = 311
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 49 ASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTL 108
AS + K P+ S++ + RR +I+++++ LQ L+PN KVD ++L+ AI Y+K L
Sbjct: 214 ASKKEKHKSNPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFL 273
Query: 109 QLQVQIMSMGSRFW 122
QLQV++++ FW
Sbjct: 274 QLQVKVLA-ADEFW 286
>IMGA|AC235009_5.1 Helix-loop-helix DNA-binding AC235009.1
19047-8194 E EGN_Mt090430 20090702
Length = 249
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKV-DKASVLDNAIEYLKTLQLQVQ 113
A+R HSL+ER RR KI+++M+ LQ L+P +KV KA VLD I Y+++LQ QV+
Sbjct: 153 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
Query: 114 IMSM 117
+SM
Sbjct: 213 FLSM 216
>IMGA|Medtr1g135080.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 30103613-30102757 H
EGN_Mt090430 20090702
Length = 157
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 70 KRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQMMLP 129
+RR +IN+++R LQ L+PN KVD +++L+ A++Y+K LQLQ++++SM WM +
Sbjct: 86 RRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSM----WMYAPIAY 141
Query: 130 NAMQQIHNLAHFSP 143
N M +L+ SP
Sbjct: 142 NGMNIGLDLSFSSP 155
>IMGA|AC235006_4.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin; Helix-loop-helix DNA-binding AC235006.1
10927-5775 E EGN_Mt090430 20090702
Length = 324
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKV-DKASVLDNAIEYLKTLQLQVQ 113
A+R HSL+ER RR KI+++M+ LQ L+P +KV KA VLD I Y+++LQ QV+
Sbjct: 153 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 212
Query: 114 IMSM 117
+SM
Sbjct: 213 FLSM 216
>IMGA|Medtr1g023470.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 5244087-5246048 E
EGN_Mt090430 20090702
Length = 366
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 49 ASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTL 108
++ + A R SL RKRR +IN+++R LQ L+PN KVD +++L+ A+ Y+K L
Sbjct: 270 SNGKTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFL 329
Query: 109 QLQVQIMSMGSRFWM 123
Q Q++++S WM
Sbjct: 330 QTQIKLLS-SDDMWM 343
>IMGA|Medtr1g023200.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 5085290-5087252 E
EGN_Mt090430 20090702
Length = 366
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 49 ASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTL 108
++ + A R SL RKRR +IN+++R LQ L+PN KVD +++L+ A+ Y+K L
Sbjct: 270 SNGKTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFL 329
Query: 109 QLQVQIMSMGSRFWM 123
Q Q++++S WM
Sbjct: 330 QTQIKLLS-SDDMWM 343
>IMGA|Medtr8g077090.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 15278935-15275354 E
EGN_Mt090430 20090702
Length = 467
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 46 PKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAIEY 104
P A+R HSL+ER RR KI+++M+ LQ L+P +KV KA +LD I Y
Sbjct: 298 PNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 357
Query: 105 LKTLQLQVQIMSM 117
+++LQ QV+ +SM
Sbjct: 358 VQSLQQQVEFLSM 370
>IMGA|Medtr4g152040.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 37581501-37578874 E
EGN_Mt090430 20090702
Length = 327
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 55 AKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAIEYLKTLQLQVQ 113
A+R HSL+ER RR KI+++M+ LQ L+P D+V KA VLD I Y+++LQ QV+
Sbjct: 147 ARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVE 206
Query: 114 IMSM 117
+SM
Sbjct: 207 FLSM 210
>IMGA|Medtr8g012630.2 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 2165562-2169242 F
EGN_Mt090430 20090702
Length = 497
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 36 ENEHAEDQQVPKPASA--RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD 93
E ++ D + P+P A+R HSL+ER RR KI+++M+ LQ L+P +KV
Sbjct: 272 EKQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 331
Query: 94 -KASVLDNAIEYLKTLQLQVQIMSM 117
KA +LD I Y+++LQ QV+ +SM
Sbjct: 332 GKALMLDEIINYVQSLQRQVEFLSM 356
>IMGA|Medtr8g012630.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 2165562-2169242 F
EGN_Mt090430 20090702
Length = 498
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 36 ENEHAEDQQVPKPASA--RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVD 93
E ++ D + P+P A+R HSL+ER RR KI+++M+ LQ L+P +KV
Sbjct: 272 EKQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 331
Query: 94 -KASVLDNAIEYLKTLQLQVQIMSM 117
KA +LD I Y+++LQ QV+ +SM
Sbjct: 332 GKALMLDEIINYVQSLQRQVEFLSM 356
>IMGA|Medtr7g111170.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 26051075-26044353 E
EGN_Mt090430 20090702
Length = 340
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAIEYLKTLQLQVQIMSM 117
HSL+ER RR KIN +M+ LQ L+P +K+ A VLD I +++TLQ QV+I+SM
Sbjct: 184 HSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQVEILSM 238
>IMGA|Medtr1g135060.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 30094588-30092473 H
EGN_Mt090430 20090702
Length = 330
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 69 RKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWMPQMML 128
+KRR +IN++++ LQ+L+PN KVD +++L+ A++Y+K LQ+Q++++S WM +
Sbjct: 254 KKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIKLLSSDDH-WMYAPIA 312
Query: 129 PNAM 132
N M
Sbjct: 313 YNGM 316
>IMGA|Medtr3g030690.1 Helix-loop-helix DNA-binding
chr03_pseudomolecule_IMGAG_V3 8372057-8375380 F
EGN_Mt090430 20090702
Length = 406
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 44 QVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAI 102
QV + AKR S++ER RR +I+ ++++LQ L P SDK A +LD A+
Sbjct: 313 QVQGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAV 372
Query: 103 EYLKTLQLQVQIMS 116
EY+K LQ QVQI++
Sbjct: 373 EYIKDLQEQVQILT 386
>IMGA|Medtr3g030690.2 Helix-loop-helix DNA-binding
chr03_pseudomolecule_IMGAG_V3 8372057-8375378 F
EGN_Mt090430 20090702
Length = 403
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 44 QVPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAI 102
QV + AKR S++ER RR +I+ ++++LQ L P SDK A +LD A+
Sbjct: 310 QVQGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAV 369
Query: 103 EYLKTLQLQVQIMS 116
EY+K LQ QVQI++
Sbjct: 370 EYIKDLQEQVQILT 383
>IMGA|Medtr8g078570.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 16006546-16008939 E
EGN_Mt090430 20090702
Length = 648
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 51 ARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQL 110
R A R P H +ER+RR K+N+K L+A++PN K+DKAS+L +AI Y+ L+
Sbjct: 450 GRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNGSKMDKASLLGDAISYINELKS 509
Query: 111 QVQ 113
++Q
Sbjct: 510 KLQ 512
>IMGA|Medtr1g071420.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 14365048-14370768 E
EGN_Mt090430 20090702
Length = 326
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVD-KASVLDNAIEYLKTLQLQVQIMSM 117
HSL+ER RR KIN +M+ LQ L+P +K+ A VLD I ++++LQ +V+I+SM
Sbjct: 171 HSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVEILSM 225
>IMGA|Medtr2g117830.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 27784261-27790716 E
EGN_Mt090430 20090702
Length = 412
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 45 VPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAIE 103
VP A+ G P S++ER RR KI+++MR+LQ L+PN DK + A +LD A++
Sbjct: 328 VPMKIRAKRGCATHP----RSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVD 383
Query: 104 YLKTLQLQVQ 113
Y+K LQ Q Q
Sbjct: 384 YIKDLQKQAQ 393
>IMGA|Medtr5g014800.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 4794613-4796572 E
EGN_Mt090430 20090702
Length = 334
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
H ++ERKRR KI++K L ALLP+ K+DKASVL +AI ++K LQ +V+++
Sbjct: 150 HIIAERKRREKISQKFIALSALLPDLKKMDKASVLGDAINHVKQLQEKVKLL 201
>IMGA|Medtr4g121940.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 28762014-28766176 H
EGN_Mt090430 20090702
Length = 333
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 41/55 (74%)
Query: 61 PRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
P+ H ++ERKRR K++++ L AL+P K+DK +VL +AI+YLK LQ +V+++
Sbjct: 156 PQDHIIAERKRREKLSQRFIALSALVPGLQKMDKVTVLGDAIKYLKKLQEKVKVL 210
>IMGA|Medtr1g086480.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 17130116-17122681 E
EGN_Mt090430 20090702
Length = 656
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSR 120
H L+ER+RR K+N++ L++L+P K+DKAS+L + IEYLK L+ ++Q + +R
Sbjct: 471 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYLKQLRRKIQDLETRNR 527
>IMGA|Medtr7g111200.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 26078999-26082072 F
EGN_Mt090430 20090702
Length = 319
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 48 PASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKAS-VLDNAIEYLK 106
P+S RA PR SL+ER RR +I+++MR+LQ ++PN DK S +LD A+EY+K
Sbjct: 240 PSSIRAKRGFATHPR--SLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIK 297
Query: 107 TLQLQVQIMS 116
LQ Q++ MS
Sbjct: 298 DLQKQLKTMS 307
>IMGA|Medtr3g029710.1 Helix-loop-helix DNA-binding
chr03_pseudomolecule_IMGAG_V3 7859387-7862472 H
EGN_Mt090430 20090702
Length = 375
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 20/124 (16%)
Query: 18 LSYSSLKTITEDMGRMTSENEHAE------------DQQVPKPASARAGAKRRPTPRVHS 65
L+Y+S +++ D G+M + ++A+ D + R G K++ P
Sbjct: 142 LNYNSNESV--DAGKMRNHEKNADNNYNSNTIIDNFDDENCVSEGDRKG-KKKENPSKSL 198
Query: 66 LSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQ-----LQVQIMSMGSR 120
++ERKRR K+ M +L++++P K+DK S+L +A++YLK L+ LQ +I S +
Sbjct: 199 IAERKRRKKLKNNMHKLRSVVPKISKMDKVSILGDAVDYLKELKQQINDLQSEIKSSSHK 258
Query: 121 FWMP 124
+MP
Sbjct: 259 SFMP 262
>IMGA|Medtr5g014820.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 4808675-4811765 F
EGN_Mt090430 20090702
Length = 301
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 14/110 (12%)
Query: 17 DLSYSSLKTITEDMGRMTSENEH----------AEDQQVPKPASARAGAKRRPT-PRVHS 65
+L YS +K +G+ +EN+ EDQ++ +A R R H
Sbjct: 75 NLDYSDVKP---KVGKRCNENKDFLPALVSQGSYEDQKIFSNYDNQANQTRNTAQAREHV 131
Query: 66 LSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
++ERKRR K+ + L A++P K+DKASVL +A +Y+K LQ ++Q +
Sbjct: 132 MAERKRREKLTRSFIALSAIVPGLKKMDKASVLGDATKYMKQLQARLQTL 181
>IMGA|Medtr8g102390.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 22471596-22469940 E
EGN_Mt090430 20090702
Length = 252
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWM 123
H ++ER RR KI++ L AL+PN K+DKASVL +AI+Y+K L+ QV+++ S+
Sbjct: 71 HIIAERIRREKISQLFIALSALIPNLKKMDKASVLGDAIKYVKELKEQVKMLEEQSKSVE 130
Query: 124 PQMML 128
P +++
Sbjct: 131 PVVVV 135
>IMGA|Medtr2g042780.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 12094103-12086501 F
EGN_Mt090430 20090702
Length = 244
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
Query: 66 LSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQ-----LQVQIMSMGSR 120
+SER RR K+N+++ L+A++PN K+DKAS++ +AIEY++ L +Q +IM + S
Sbjct: 55 VSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQLLHEQEKVIQAEIMELESG 114
Query: 121 FWMPQMMLPNAMQQIHNLAHFSPMGIRMGMGVGS--FQNPAVLGFPARILPMQMS 173
+PN + ++ PM +R + + + FP +L ++++
Sbjct: 115 -------MPNNINPSYDFDQELPMLLRSKKKRTDQLYDSVSSRNFPIEVLELRVT 162
>IMGA|Medtr2g010480.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 2554546-2556774 E
EGN_Mt090430 20090702
Length = 338
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
H ++ERKRR K++++ L AL+PN K+DKASVL AI YLK ++ +V ++
Sbjct: 163 HIVTERKRREKLSQRFIALSALVPNLKKMDKASVLGEAIRYLKQMEEKVSVL 214
>IMGA|Medtr4g142590.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 35530464-35531363 H
EGN_Mt090430 20090702
Length = 275
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 48 PASARAGAKR--RPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYL 105
PA+ R +R R + S++ R RR +I++K+R LQ L+P K+D AS+LD AI Y+
Sbjct: 107 PATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYV 166
Query: 106 KTLQLQVQIM 115
K L+ Q++++
Sbjct: 167 KFLKRQIKLL 176
>IMGA|Medtr8g102510.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 22543896-22546492 E
EGN_Mt090430 20090702
Length = 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 7/74 (9%)
Query: 43 QQVP-KPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNA 101
QQ P KP +RA A H ++ERKRR K+++ L AL+PN K+DKASVL +
Sbjct: 164 QQKPLKPKRSRANADD------HIMAERKRREKLSQSFIALAALVPNLKKMDKASVLAES 217
Query: 102 IEYLKTLQLQVQIM 115
I Y+K L+ +++++
Sbjct: 218 IIYVKELKERLEVL 231
>IMGA|Medtr7g015360.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 3853072-3859438 E
EGN_Mt090430 20090702
Length = 366
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 54 GAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSD-KVDKASVLDNAIEYLKTLQLQV 112
G + P HS +E++RR KIN++ + L+ L+P +D K DKAS L IEY+ LQ ++
Sbjct: 45 GKRANPHRSKHSETEQRRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIHFLQEKL 104
Query: 113 QIMSMGSRFW--MPQMMLP 129
QI W P ++P
Sbjct: 105 QIYEHPYEGWNQEPTKLIP 123
>IMGA|Medtr2g046170.2 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 12892327-12896513 E
EGN_Mt090430 20090702
Length = 418
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWM 123
H +SER+RR K+N+ + L+ALLP K DKAS+L A E L++L ++ +S ++ M
Sbjct: 225 HMISERRRREKLNENFQALRALLPQGTKKDKASILITAKETLRSLMAEIDKLSKRNQELM 284
Query: 124 PQMMLPNA------MQQIHNLAHFSPMGIRMGMGVGS 154
Q LP A ++I + + + +R+ GS
Sbjct: 285 SQ-QLPAANKESTKTKEIVKFSSYERLNVRVLHVTGS 320
>IMGA|Medtr2g046170.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 12891629-12896513 E
EGN_Mt090430 20090702
Length = 528
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMSMGSRFWM 123
H +SER+RR K+N+ + L+ALLP K DKAS+L A E L++L ++ +S ++ M
Sbjct: 335 HMISERRRREKLNENFQALRALLPQGTKKDKASILITAKETLRSLMAEIDKLSKRNQELM 394
Query: 124 PQMMLPNA------MQQIHNLAHFSPMGIRMGMGVGS 154
Q LP A ++I + + + +R+ GS
Sbjct: 395 SQ-QLPAANKESTKTKEIVKFSSYERLNVRVLHVTGS 430
>IMGA|Medtr1g147140.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 32717978-32714249 E
EGN_Mt090430 20090702
Length = 343
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 45 VPKPASARAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDK-VDKASVLDNAIE 103
VP A+ G P S++ER+RR +I+ K+++LQ L+PN DK + +LD A++
Sbjct: 261 VPCKIRAKRGCATHP----RSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 316
Query: 104 YLKTLQLQVQIM 115
++K LQ QVQ +
Sbjct: 317 HIKGLQTQVQKL 328
>IMGA|Medtr8g102380.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 22465881-22462839 E
EGN_Mt090430 20090702
Length = 328
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 41/54 (75%)
Query: 62 RVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
R H ++ERKRR K++++ L ++LP K+DKA++L++AI+++K LQ +V+ +
Sbjct: 154 RDHVIAERKRREKLSQRFIALSSILPGLKKMDKATILEDAIKHMKQLQERVKTL 207
>IMGA|Medtr2g127350.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 31052041-31053922 H
EGN_Mt090430 20090702
Length = 295
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQV 112
H+L+ER+RR ++ K EL A++P S K DKAS++ AI Y++ LQ +V
Sbjct: 121 HTLAERRRRLELAHKFTELSAIIPRSKKTDKASIVQGAINYVEKLQKRV 169
>IMGA|Medtr1g083450.1 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 16409366-16405265 E
EGN_Mt090430 20090702
Length = 285
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%)
Query: 52 RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQ 111
R A+R HS++ER RR +I +++R LQ L+P+ +K D+A++LD ++Y+K L+LQ
Sbjct: 122 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 181
Query: 112 VQIMSM 117
V+++SM
Sbjct: 182 VKVLSM 187
>IMGA|Medtr1g083450.2 Helix-loop-helix DNA-binding
chr01_pseudomolecule_IMGAG_V3 16409366-16405373 E
EGN_Mt090430 20090702
Length = 282
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%)
Query: 52 RAGAKRRPTPRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQ 111
R A+R HS++ER RR +I +++R LQ L+P+ +K D+A++LD ++Y+K L+LQ
Sbjct: 119 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 178
Query: 112 VQIMSM 117
V+++SM
Sbjct: 179 VKVLSM 184
>IMGA|Medtr5g014710.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 4753537-4757846 F
EGN_Mt090430 20090702
Length = 333
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 40/53 (75%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIMS 116
H ++ERKRR K+++ + L AL+P K+DKASVL +AI+Y+K LQ +++++
Sbjct: 158 HIIAERKRREKLSQCLIALAALIPGLKKMDKASVLGDAIKYVKELQERLRVLE 210
>IMGA|Medtr3g147680.1 Helix-loop-helix DNA-binding
chr03_pseudomolecule_IMGAG_V3 38286443-38284836 H
EGN_Mt090430 20090702
Length = 280
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQ 113
S++ R RR +I++K+R LQ ++P K+D AS+LD AI Y+K L+ Q++
Sbjct: 182 QSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLK 231
>IMGA|Medtr4g006510.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 885745-887402 E
EGN_Mt090430 20090702
Length = 331
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 39 HAEDQQVPKPASARAGAKR-RPTPRV--HSLSERKRRHKINKKMRELQALLPNSDKVDKA 95
H +Q+ + + G KR R + + H ++ERKRR ++++K L A +P K DKA
Sbjct: 125 HESNQKSEMKINQQNGVKRGRSSSQCIDHIMAERKRRQELSEKFIALSATIPGLSKTDKA 184
Query: 96 SVLDNAIEYLKTLQLQVQ 113
S+L AI+Y+K L+ +V
Sbjct: 185 SILREAIDYVKQLKERVD 202
>IMGA|Medtr4g006370.1 Helix-loop-helix DNA-binding
chr04_pseudomolecule_IMGAG_V3 826490-828020 E
EGN_Mt090430 20090702
Length = 331
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 39 HAEDQQVPKPASARAGAKR-RPTPRV--HSLSERKRRHKINKKMRELQALLPNSDKVDKA 95
H +Q+ + + G KR R + + H ++ERKRR ++++K L A +P K DKA
Sbjct: 125 HESNQKSEMKINQQNGVKRGRSSSQCIDHIMAERKRRQELSEKFIALSATIPGLSKTDKA 184
Query: 96 SVLDNAIEYLKTLQLQVQ 113
S+L AI+Y+K L+ +V
Sbjct: 185 SILREAIDYVKQLKERVD 202
>IMGA|Medtr8g102360.1 Helix-loop-helix DNA-binding
chr08_pseudomolecule_IMGAG_V3 22450793-22448627 E
EGN_Mt090430 20090702
Length = 328
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 64 HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTLQLQVQIM 115
H ++ER+RR K++++ L +LLP K+DKA++L++AI++LK L +V+ +
Sbjct: 156 HVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTL 207
>IMGA|Medtr2g127330.1 Helix-loop-helix DNA-binding
chr02_pseudomolecule_IMGAG_V3 31042247-31046673 E
EGN_Mt090430 20090702
Length = 364
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 49 ASARAGAKRRPTPRV--HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLK 106
AS + G K R + H ++ERKRR ++++K L A +P K+DK S+L AI Y+K
Sbjct: 171 ASNQTGKKSRSGSQCLDHIMAERKRRLELSQKFIALSATIPGLKKMDKTSILGEAINYVK 230
Query: 107 TLQLQVQ 113
LQ +V+
Sbjct: 231 ILQERVK 237
>IMGA|AC233682_19.1 Helix-loop-helix DNA-binding AC233682.2
73932-72796 H EGN_Mt090430 20090702
Length = 298
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 44 QVPKPASARAGAKRRPTPRV---HSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDN 100
+V P +A + +++ T R S++ R+RR KI +K +EL L+P K++ A +L+
Sbjct: 145 EVEPPFAATSKIEKKVTERTISSQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNA 204
Query: 101 AIEYLKTLQLQVQIMSMGSRF 121
A Y+K LQ QV ++ + F
Sbjct: 205 AANYVKFLQAQVGMLQLMETF 225
>IMGA|Medtr5g014770.1 Helix-loop-helix DNA-binding
chr05_pseudomolecule_IMGAG_V3 4778475-4780729 E
EGN_Mt090430 20090702
Length = 307
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 41 EDQQVPKPASARAGAKRRPTPRVHS---LSERKRRHKINKKMRELQALLPNSDKVDKASV 97
++Q + + + + +R H ++ERKRR K+++ + L AL+P K+DKASV
Sbjct: 106 QNQNIVETKNTQGQGTKRSVAHDHQDRIMAERKRREKLSQCLITLAALIPGLKKMDKASV 165
Query: 98 LDNAIEYLKTLQLQVQIMS 116
+ +AI+++K LQ +++++
Sbjct: 166 IGDAIKHVKELQERLRVLE 184
>IMGA|Medtr7g096910.1 Helix-loop-helix DNA-binding
chr07_pseudomolecule_IMGAG_V3 21802125-21805120 E
EGN_Mt090430 20090702
Length = 475
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 36/48 (75%)
Query: 61 PRVHSLSERKRRHKINKKMRELQALLPNSDKVDKASVLDNAIEYLKTL 108
P + ++ER+RR K+N ++ L++++P K+D+AS+L +A++YLK L
Sbjct: 284 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAVDYLKEL 331