Jatropha Genome Database

JcCA0309221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0309221.10 + phase: 0 /pseudo
         (181 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g142970.1 Glycosyltransferase 28, C-terminal chr03_ps...   237   3e-63

>IMGA|Medtr3g142970.1 Glycosyltransferase 28, C-terminal
           chr03_pseudomolecule_IMGAG_V3 36776695-36772624 F
           EGN_Mt090430 20090702
          Length = 173

 Score =  237 bits (604), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 121/172 (70%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 9   DQKKRIVFVTVGTNTIRCSCESGGYKGS*TKNCLEEGILISLFKMGRGSYTPTKSEGEDG 68
           ++ KR+VFVTVGT +     +S   +    K  L +G    L +MGRGSY PTKSEG D 
Sbjct: 4   EKTKRVVFVTVGTTSFDALVKSVDSETV-QKELLAKGYTHLLIQMGRGSYLPTKSEG-DC 61

Query: 69  SVAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLHKPLIVVVNEDLMDNHQTELAE 128
           ++AVDYFTFSSSIADH+RSASL+ISHAGSGSIFETL+L KPLIVVVNEDLMDNHQ+ELAE
Sbjct: 62  TLAVDYFTFSSSIADHIRSASLIISHAGSGSIFETLQLCKPLIVVVNEDLMDNHQSELAE 121

Query: 129 ELAERKHLYCARPQTIHHTIADMDLESLLPYPAGDATPVAKLINRFLGFPDD 180
           ELA RKHL+CA PQT+H TIADMDL +L PY  GDATPVAK INRFLGFPDD
Sbjct: 122 ELANRKHLFCASPQTLHQTIADMDLNALRPYSPGDATPVAKHINRFLGFPDD 173