Jatropha Genome Database

JcCA0308971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308971.10 + phase: 2 /partial
         (377 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g157910.1 Phosphoglucomutase/phosphomannomutase alpha...   682   0.0  
IMGA|Medtr4g157910.2 Phosphoglucomutase/phosphomannomutase alpha...   682   0.0  
IMGA|Medtr1g129920.2 Phosphoglucomutase/phosphomannomutase alpha...   453   e-128
IMGA|Medtr1g129920.1 Phosphoglucomutase/phosphomannomutase alpha...   451   e-127
IMGA|Medtr8g138400.1 Phosphoglucomutase/phosphomannomutase C ter...   112   4e-25
IMGA|Medtr1g129950.1 Phosphoglucomutase, chloroplast precursor, ...   112   4e-25
IMGA|Medtr1g129970.1 Phosphoglucomutase, chloroplast precursor, ...    62   3e-10

>IMGA|Medtr4g157910.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain I; chr04_pseudomolecule_IMGAG_V3
           39477315-39469380 E EGN_Mt090430 20090702
          Length = 638

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/377 (88%), Positives = 342/377 (90%), Gaps = 1/377 (0%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           SIFDF SIRKLLSSPKFTFC+D LHGVAGAYAKRIFV+ELGAQ SSLLNCVPKEDFGGGH
Sbjct: 263 SIFDFGSIRKLLSSPKFTFCFDGLHGVAGAYAKRIFVDELGAQESSLLNCVPKEDFGGGH 322

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXX 120
           PDPNLTYAKELVARMGLGKS SE EPPEFGAAADGDADRNMILGKRFFVTPSDS      
Sbjct: 323 PDPNLTYAKELVARMGLGKSESEGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAA 382

Query: 121 XXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 180
                 PYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG
Sbjct: 383 NAVEAIPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 442

Query: 181 EESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYT 240
           EESFGTGSDHIREKDGIWAVLAWLSILA+KNK+N+   KLVTVEDIVR HWA YGRHYYT
Sbjct: 443 EESFGTGSDHIREKDGIWAVLAWLSILAYKNKDNIE-DKLVTVEDIVRQHWAKYGRHYYT 501

Query: 241 RYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSIS 300
           RYDYENVDA AAKELMAHLV LQSSL E N IVKG  SDVSNVVH DEFEY DPVDGSIS
Sbjct: 502 RYDYENVDAGAAKELMAHLVKLQSSLSEANGIVKGASSDVSNVVHGDEFEYNDPVDGSIS 561

Query: 301 SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALK 360
           SHQGIRYLFEDGSRL+FRLSGTGSEGATIRLYIEQYEK+PSK GR S EALAPLV+ ALK
Sbjct: 562 SHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKNPSKIGRLSHEALAPLVEAALK 621

Query: 361 LSKMQEFTGRSAPTVIT 377
           LSKM+EFTGRSAPTVIT
Sbjct: 622 LSKMEEFTGRSAPTVIT 638


>IMGA|Medtr4g157910.2 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr04_pseudomolecule_IMGAG_V3
           39476799-39469380 E EGN_Mt090430 20090702
          Length = 582

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/377 (88%), Positives = 342/377 (90%), Gaps = 1/377 (0%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           SIFDF SIRKLLSSPKFTFC+D LHGVAGAYAKRIFV+ELGAQ SSLLNCVPKEDFGGGH
Sbjct: 207 SIFDFGSIRKLLSSPKFTFCFDGLHGVAGAYAKRIFVDELGAQESSLLNCVPKEDFGGGH 266

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXX 120
           PDPNLTYAKELVARMGLGKS SE EPPEFGAAADGDADRNMILGKRFFVTPSDS      
Sbjct: 267 PDPNLTYAKELVARMGLGKSESEGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAA 326

Query: 121 XXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 180
                 PYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG
Sbjct: 327 NAVEAIPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 386

Query: 181 EESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYT 240
           EESFGTGSDHIREKDGIWAVLAWLSILA+KNK+N+   KLVTVEDIVR HWA YGRHYYT
Sbjct: 387 EESFGTGSDHIREKDGIWAVLAWLSILAYKNKDNIE-DKLVTVEDIVRQHWAKYGRHYYT 445

Query: 241 RYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSIS 300
           RYDYENVDA AAKELMAHLV LQSSL E N IVKG  SDVSNVVH DEFEY DPVDGSIS
Sbjct: 446 RYDYENVDAGAAKELMAHLVKLQSSLSEANGIVKGASSDVSNVVHGDEFEYNDPVDGSIS 505

Query: 301 SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALK 360
           SHQGIRYLFEDGSRL+FRLSGTGSEGATIRLYIEQYEK+PSK GR S EALAPLV+ ALK
Sbjct: 506 SHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKNPSKIGRLSHEALAPLVEAALK 565

Query: 361 LSKMQEFTGRSAPTVIT 377
           LSKM+EFTGRSAPTVIT
Sbjct: 566 LSKMEEFTGRSAPTVIT 582


>IMGA|Medtr1g129920.2 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr01_pseudomolecule_IMGAG_V3
           29112700-29119131 E EGN_Mt090430 20090702
          Length = 622

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/377 (58%), Positives = 274/377 (72%), Gaps = 12/377 (3%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           ++FDF+ I+ L+S P F F +DA+H VAGAYA  IFV++LGA   S+ N +P EDFG GH
Sbjct: 258 TVFDFQLIKGLVSRPDFRFTFDAMHAVAGAYATPIFVDKLGATPDSISNGIPLEDFGHGH 317

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXX 120
           PDPNLTYAK+LV  M           P+FGAA+DGD DRNMILG  FFVTPSDS      
Sbjct: 318 PDPNLTYAKDLVNIMYAENG------PDFGAASDGDGDRNMILGTSFFVTPSDSVAVIAA 371

Query: 121 XXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 180
                 PYF   +KG+ARSMPTS ALD VA+ LNL FFEVPTGWKFFGNLMDAG  S+CG
Sbjct: 372 NAKEAIPYFKNSVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSICG 431

Query: 181 EESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYT 240
           EESFGTGSDHIREKDGIWAVLAWLSI+AH+NK+   G KL++V D+V+ HWA YGR++++
Sbjct: 432 EESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDTKPGEKLISVSDVVKEHWATYGRNFFS 491

Query: 241 RYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSIS 300
           RYDYE  ++  A +++ +L    S      K   G +     +  AD+F Y DPVDGS+ 
Sbjct: 492 RYDYEECESEGANKMIEYLRECLS------KSKSGDKYGSYVLQFADDFTYTDPVDGSVV 545

Query: 301 SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALK 360
           S QG+R++F DGSR+++RLSGTGS GAT+R+YIEQ+E D SK   D+Q AL PL+D+AL 
Sbjct: 546 SKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDLDAQIALKPLIDLALS 605

Query: 361 LSKMQEFTGRSAPTVIT 377
           +SK++EFTGR  PTVIT
Sbjct: 606 VSKLKEFTGREKPTVIT 622


>IMGA|Medtr1g129920.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr01_pseudomolecule_IMGAG_V3
           29112700-29119131 E EGN_Mt090430 20090702
          Length = 625

 Score =  451 bits (1161), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/377 (58%), Positives = 274/377 (72%), Gaps = 12/377 (3%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           ++FDF+ I+ L+S P F F +DA+H VAGAYA  IFV++LGA   S+ N +P EDFG GH
Sbjct: 261 TVFDFQLIKGLVSRPDFRFTFDAMHAVAGAYATPIFVDKLGATPDSISNGIPLEDFGHGH 320

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXX 120
           PDPNLTYAK+LV  M           P+FGAA+DGD DRNMILG  FFVTPSDS      
Sbjct: 321 PDPNLTYAKDLVNIMYAENG------PDFGAASDGDGDRNMILGTSFFVTPSDSVAVIAA 374

Query: 121 XXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 180
                 PYF   +KG+ARSMPTS ALD VA+ LNL FFEVPTGWKFFGNLMDAG  S+CG
Sbjct: 375 NAKEAIPYFKNSVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSICG 434

Query: 181 EESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYT 240
           EESFGTGSDHIREKDGIWAVLAWLSI+AH+NK+   G KL++V D+V+ HWA YGR++++
Sbjct: 435 EESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDTKPGEKLISVSDVVKEHWATYGRNFFS 494

Query: 241 RYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSIS 300
           RYDYE  ++  A +++ +L    S      K   G +     +  AD+F Y DPVDGS+ 
Sbjct: 495 RYDYEECESEGANKMIEYLRECLS------KSKSGDKYGSYVLQFADDFTYTDPVDGSVV 548

Query: 301 SHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALK 360
           S QG+R++F DGSR+++RLSGTGS GAT+R+YIEQ+E D SK   D+Q AL PL+D+AL 
Sbjct: 549 SKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDLDAQIALKPLIDLALS 608

Query: 361 LSKMQEFTGRSAPTVIT 377
           +SK++EFTGR  PTVIT
Sbjct: 609 VSKLKEFTGREKPTVIT 625


>IMGA|Medtr8g138400.1 Phosphoglucomutase/phosphomannomutase C
           terminal chr08_pseudomolecule_IMGAG_V3 33405500-33405050
           E EGN_Mt090430 20090702
          Length = 73

 Score =  112 bits (279), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/67 (82%), Positives = 60/67 (89%)

Query: 311 DGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVALKLSKMQEFTGR 370
           +G  L+FRLS TGSEGATIRLYIEQYEKDPSK GR S EALAPLV+ +LKLSKM+EFTGR
Sbjct: 7   NGHGLIFRLSVTGSEGATIRLYIEQYEKDPSKIGRLSHEALAPLVEASLKLSKMEEFTGR 66

Query: 371 SAPTVIT 377
           SAPTVIT
Sbjct: 67  SAPTVIT 73


>IMGA|Medtr1g129950.1 Phosphoglucomutase, chloroplast precursor,
           putative chr01_pseudomolecule_IMGAG_V3 29127646-29129350
           E EGN_Mt090430 20090702
          Length = 227

 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 81/123 (65%), Gaps = 6/123 (4%)

Query: 199 AVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYTRYDYENVDASAAKELMAH 258
           AVLAW+SI+AH NK+   G KL++V D+V+ HWA YGR++++RYDYE  ++  A +++ +
Sbjct: 95  AVLAWISIIAHHNKDTKPGEKLISVFDVVKEHWATYGRNFFSRYDYEECESEGANKMIEY 154

Query: 259 LVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSISSHQGIRYLFEDGSRLVFR 318
           L    S      K   G +     +  AD+F Y DPVD S+ S QG+R++F DGSR+++R
Sbjct: 155 LRECLS------KSKPGDKYGSYVLQFADDFTYTDPVDRSVVSKQGVRFVFTDGSRIIYR 208

Query: 319 LSG 321
           LS 
Sbjct: 209 LSA 211


>IMGA|Medtr1g129970.1 Phosphoglucomutase, chloroplast precursor,
           putative chr01_pseudomolecule_IMGAG_V3 29130248-29130583
           E EGN_Mt090430 20090702
          Length = 59

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/47 (61%), Positives = 36/47 (76%)

Query: 331 LYIEQYEKDPSKTGRDSQEALAPLVDVALKLSKMQEFTGRSAPTVIT 377
           LYIEQ+E D SK   D+Q AL PL+ +AL +SK++EFTGR  PTVIT
Sbjct: 13  LYIEQFEPDVSKHDLDAQIALKPLIHLALSVSKLKEFTGREKPTVIT 59