Jatropha Genome Database

JcCA0308861.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308861.20 - phase: 0 
         (133 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g103750.1 Dihydroneopterin aldolase family chr02_pseu...   190   2e-49

>IMGA|Medtr2g103750.1 Dihydroneopterin aldolase family
           chr02_pseudomolecule_IMGAG_V3 24260418-24262392 E
           EGN_Mt090430 20090702
          Length = 144

 Score =  190 bits (482), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 105/125 (84%)

Query: 4   DEIMGGDKLILRGLKFHGFHGVKPEERTLGQKFLIDVDAWMDLREAGKTDRLSDTISYTE 63
           D ++GGDKLILRGL F+GFHG   EERTLGQKF++DVDAW+DL+ AGK+D LSD+ SY E
Sbjct: 16  DALIGGDKLILRGLTFYGFHGAIAEERTLGQKFVVDVDAWLDLKPAGKSDNLSDSFSYAE 75

Query: 64  IYRIVKEVVEGAPHNLLESVAHKIASTTLTKYPQISAVRVKVGKPHVAVHGPLDYLGVEI 123
           IY I K+V+EG  HNLLESVAHKIA  TL  + +IS VRVKVGKPHVA+ GP+DYLGVEI
Sbjct: 76  IYLIAKKVIEGPAHNLLESVAHKIAIATLEVHKEISTVRVKVGKPHVAIQGPVDYLGVEI 135

Query: 124 LRRRS 128
           LRRRS
Sbjct: 136 LRRRS 140